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2P72
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BU of 2p72 by Molmil
crystal structure of a glycosyltransferase involved in the glycosylation of the major capsid of PBCV-1
Descriptor: MANGANESE (II) ION, Putative glycosyltransferase (Mannosyltransferase) involved in glycosylating the PBCV-1 major capsid protein, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Zhang, Y, Xiang, Y, Van Etten, J.L, Rossmann, M.G.
Deposit date:2007-03-19
Release date:2007-08-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and function of a chlorella virus-encoded glycosyltransferase.
Structure, 15, 2007
4EKX
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BU of 4ekx by Molmil
Crystal Structure of YLDV 14L IL-18 Binding Protein in Complex with Human IL-18
Descriptor: 14L protein, Interleukin-18
Authors:Krumm, B.E, Xiang, Y, Deng, J.
Deposit date:2012-04-10
Release date:2012-09-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A unique bivalent binding and inhibition mechanism by the yatapoxvirus interleukin 18 binding protein.
Plos Pathog., 8, 2012
3TXS
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BU of 3txs by Molmil
Crystal Structure of phage 44RR small terminase gp16
Descriptor: Terminase DNA packaging enzyme small subunit
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2011-09-23
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TXQ
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BU of 3txq by Molmil
Crystal Structure of phage 44RR small terminase gp16
Descriptor: Terminase DNA packaging enzyme small subunit
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2011-09-23
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
8IGG
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BU of 8igg by Molmil
C2 reconstruction of the concave tetramer in the cube-like assembly of 201Phi2-1 gp105
Descriptor: Chimallin
Authors:Liu, Z, Xiang, Y.
Deposit date:2023-02-20
Release date:2023-05-03
Last modified:2023-05-17
Method:ELECTRON MICROSCOPY (4.09 Å)
Cite:Structural studies of the nucleus-like assembly of jumbo bacteriophage 201 phi 2-1.
Front Microbiol, 14, 2023
8IGL
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BU of 8igl by Molmil
Crystal structure of a major fragment of the ASFV inner capsid protein p150
Descriptor: CP2475L
Authors:Li, H, Liu, Q, Xiang, Y.
Deposit date:2023-02-20
Release date:2023-05-03
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into the Assembly of the African Swine Fever Virus Inner Capsid.
J.Virol., 97, 2023
3J2Z
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BU of 3j2z by Molmil
Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10
Descriptor: m10 heavy chain, m10 light chain
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16.9 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3J2X
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BU of 3j2x by Molmil
Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242
Descriptor: m242 heavy chain, m242 light chain
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (15.6 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3J30
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BU of 3j30 by Molmil
Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152
Descriptor: CHK152 heavy chain, CHK152 light chain
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3J2Y
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BU of 3j2y by Molmil
Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B
Descriptor: 9.8B heavy chain, 9.8B light chain
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3JA7
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BU of 3ja7 by Molmil
Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
Descriptor: Portal protein gp20
Authors:Sun, L, Zhang, X, Gao, S, Rao, P.A, Padilla-Sanchez, V, Chen, Z, Sun, S, Xiang, Y, Subramaniam, S, Rao, V.B, Rossmann, M.G.
Deposit date:2015-04-21
Release date:2015-07-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution.
Nat Commun, 6, 2015
3J2W
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BU of 3j2w by Molmil
Electron cryo-microscopy of Chikungunya virus
Descriptor: Capsid protein, Glycoprotein E1, Glycoprotein E2
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
7DM2
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BU of 7dm2 by Molmil
crystal structure of the M. tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-170
Descriptor: PHOSPHATE ION, Phosphate-binding protein PstS 1, heavy chain, ...
Authors:Ma, B, Freund, N, Xiang, Y.
Deposit date:2020-12-01
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human antibodies targeting a Mycobacterium transporter protein mediate protection against tuberculosis.
Nat Commun, 12, 2021
7DM1
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BU of 7dm1 by Molmil
crystal structure of the M.tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-36
Descriptor: PHOSPHATE ION, Phosphate-binding protein PstS 1, heavy chain, ...
Authors:Ma, B, Freund, N, Xiang, Y.
Deposit date:2020-12-01
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human antibodies targeting a Mycobacterium transporter protein mediate protection against tuberculosis.
Nat Commun, 12, 2021
7V7B
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BU of 7v7b by Molmil
CryoEM structure of DDB1-VprBP complex in ARM-up conformation
Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1
Authors:Wang, D, Xu, J, Liu, Q, Xiang, Y.
Deposit date:2021-08-21
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
7V7C
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BU of 7v7c by Molmil
CryoEM structure of DDB1-VprBP-Vpr-UNG2(94-313) complex
Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, Protein Vpr, ...
Authors:Wang, D, Xu, J, Liu, Q, Xiang, Y.
Deposit date:2021-08-21
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
5FB5
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BU of 5fb5 by Molmil
Crystal structure of the bacteriophage phi29 tail knob protein gp9
Descriptor: Distal tube protein
Authors:Xu, J.W, Gui, M, Wang, D.H, Xiang, Y.
Deposit date:2015-12-14
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The bacteriophage 29 tail possesses a pore-forming loop for cell membrane penetration.
Nature, 534, 2016
5FEI
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BU of 5fei by Molmil
Crystal structure of the bacteriophage phi29 tail knob protein gp9 truncation variant
Descriptor: DI(HYDROXYETHYL)ETHER, Distal tube protein
Authors:Xu, J.W, Gui, M, Wang, D.H, Xiang, Y.
Deposit date:2015-12-17
Release date:2016-06-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:The bacteriophage 29 tail possesses a pore-forming loop for cell membrane penetration.
Nature, 534, 2016
5FB4
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BU of 5fb4 by Molmil
Crystal structure of the bacteriophage phi29 tail knob protein gp9 truncation variant
Descriptor: DI(HYDROXYETHYL)ETHER, Distal tube protein
Authors:Xu, J.W, Gui, M, Wang, D.H, Xiang, Y.
Deposit date:2015-12-14
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:The bacteriophage 29 tail possesses a pore-forming loop for cell membrane penetration.
Nature, 534, 2016
3MUU
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BU of 3muu by Molmil
Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH
Descriptor: Structural polyprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
3MUW
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BU of 3muw by Molmil
Pseudo-atomic structure of the E2-E1 protein shell in Sindbis virus
Descriptor: Structural polyprotein
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
7KSP
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BU of 7ksp by Molmil
Crystal structure of hSAMD9_DBD with DNA
Descriptor: DNA, Sterile alpha motif domain-containing protein 9
Authors:Peng, S, Pathak, P, Xiang, Y, Deng, J.
Deposit date:2020-11-23
Release date:2022-01-05
Last modified:2022-04-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of an effector domain in antiviral factors and tumor suppressors SAMD9 and SAMD9L.
Proc.Natl.Acad.Sci.USA, 119, 2022
8IHP
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BU of 8ihp by Molmil
Structure of Semliki Forest virus VLP in complex with the receptor VLDLR-LA3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
Authors:Cao, D, Ma, B, Cao, Z, Zhang, X, Xiang, Y.
Deposit date:2023-02-23
Release date:2023-04-12
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Semliki Forest virus in complex with its receptor VLDLR.
Cell, 186, 2023
7FFL
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BU of 7ffl by Molmil
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 2-fold axes
Descriptor: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021
7FFE
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BU of 7ffe by Molmil
Cryo-EM structure of VEEV VLP
Descriptor: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021

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