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3GSY
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BU of 3gsy by Molmil
Structure of berberine bridge enzyme in complex with dehydroscoulerine
分子名称: 2,9-dihydroxy-3,10-dimethoxy-5,6-dihydroisoquino[3,2-a]isoquinolinium, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-03-27
公開日2009-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Berberine bridge enzyme catalyzes the six electron oxidation of (S)-reticuline to dehydroscoulerine.
Phytochemistry, 70, 2009
3FW7
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BU of 3fw7 by Molmil
Structure of berberine bridge enzyme, H104A variant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-01-17
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.825 Å)
主引用文献Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FWA
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BU of 3fwa by Molmil
Structure of berberine bridge enzyme, C166A variant in complex with (S)-reticuline
分子名称: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-01-17
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.496 Å)
主引用文献Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FW8
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BU of 3fw8 by Molmil
Structure of berberine bridge enzyme, C166A variant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-01-17
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FW9
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BU of 3fw9 by Molmil
Structure of berberine bridge enzyme in complex with (S)-scoulerine
分子名称: (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-01-17
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.489 Å)
主引用文献Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3D2J
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BU of 3d2j by Molmil
Structure of berberine bridge enzyme from Eschscholzia californica, tetragonal crystal form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
著者Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
登録日2008-05-08
公開日2008-10-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
3D2H
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BU of 3d2h by Molmil
Structure of berberine bridge enzyme from Eschscholzia californica, monoclinic crystal form
分子名称: (2R,3S,4S)-5-[(4R)-6',7'-dimethyl-2,3',5-trioxo-1'H-spiro[imidazolidine-4,2'-quinoxalin]-4'(3'H)-yl]-2,3,4-trihydroxypentyl-adenosine diphosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
登録日2008-05-08
公開日2008-10-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
3D2D
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BU of 3d2d by Molmil
Structure of berberine bridge enzyme in complex with (S)-reticuline
分子名称: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
登録日2008-05-08
公開日2008-10-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
4HH2
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BU of 4hh2 by Molmil
Structure of PpsR without the HTH motif from Rb. sphaeroides
分子名称: Transcriptional regulator, PpsR
著者Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
登録日2012-10-09
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH0
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BU of 4hh0 by Molmil
Dark-state structure of AppA C20S without the Cys-rich region from Rb. sphaeroides
分子名称: AppA protein, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
著者Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
登録日2012-10-09
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH3
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BU of 4hh3 by Molmil
Structure of the AppA-PpsR2 core complex from Rb. sphaeroides
分子名称: AppA protein, Transcriptional regulator, PpsR
著者Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
登録日2012-10-09
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH1
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BU of 4hh1 by Molmil
Dark-state structure of AppA wild-type without the Cys-rich region from Rb. sphaeroides
分子名称: AppA protein, FLAVIN MONONUCLEOTIDE
著者Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
登録日2012-10-09
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.501 Å)
主引用文献A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
5EFW
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BU of 5efw by Molmil
Crystal structure of LOV2-Zdk1 - the complex of oat LOV2 and the affibody protein Zdark1
分子名称: FLAVIN MONONUCLEOTIDE, NPH1-1, SULFATE ION, ...
著者Winkler, A, Wang, H, Hartmann, E, Hahn, K, Schlichting, I.
登録日2015-10-26
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献LOVTRAP: an optogenetic system for photoinduced protein dissociation.
Nat.Methods, 13, 2016
4J2P
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BU of 4j2p by Molmil
Crystal structure of LuxF from Photobacterium leiognathi
分子名称: Non-fluorescent flavoprotein
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2013-02-05
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical properties of LuxF from Photobacterium leiognathi.
Biochim. Biophys. Acta, 1854, 2015
4EC3
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BU of 4ec3 by Molmil
Structure of berberine bridge enzyme, H174A variant in complex with (S)-reticuline
分子名称: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2012-03-26
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6501 Å)
主引用文献Catalytic and structural role of a conserved active site histidine in berberine bridge enzyme.
Biochemistry, 51, 2012
4RH0
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BU of 4rh0 by Molmil
Spore photoproduct lyase C140A/S76C mutant with bound AdoMet
分子名称: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ...
著者Benjdia, A, Heil, K, Winkler, A, Carell, T, Schlichting, I.
登録日2014-10-01
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Rescuing DNA repair activity by rewiring the H-atom transfer pathway in the radical SAM enzyme, spore photoproduct lyase.
Chem.Commun.(Camb.), 50, 2014
4RH1
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BU of 4rh1 by Molmil
Spore photoproduct lyase C140A/S76C mutant with bound AdoMet and dinucleoside spore photoproduct
分子名称: 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione, IRON/SULFUR CLUSTER, SULFATE ION, ...
著者Benjdia, A, Heil, K, Winkler, A, Carell, T, Schlichting, I.
登録日2014-10-01
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Rescuing DNA repair activity by rewiring the H-atom transfer pathway in the radical SAM enzyme, spore photoproduct lyase.
Chem.Commun.(Camb.), 50, 2014
7JFY
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BU of 7jfy by Molmil
GAS41 YEATS domain in complex with 5
分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, N-(5-{3-[(2S)-1,3-thiazolidin-2-yl]azetidine-1-carbonyl}thiophen-2-yl)-L-prolinamide, ...
著者Linhares, B.M, Listunov, D, Winkler, A, Grembecka, J, Cierpicki, T.
登録日2020-07-17
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.100557 Å)
主引用文献GAS41 YEATS domain in complex with 5
To Be Published
8C05
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BU of 8c05 by Molmil
LOV-activated diguanylate cyclase, dark-state structure
分子名称: DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, ...
著者Vide, U, Winkler, A.
登録日2022-12-15
公開日2023-07-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Illuminating the inner workings of a natural protein switch: Blue-light sensing in LOV-activated diguanylate cyclases.
Sci Adv, 9, 2023
6SAW
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BU of 6saw by Molmil
Chromophore binding domain of bacteriophytochrome linked diguanylyl cyclase from Idiomarina species A28L (dimeric Pfr-like state).
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, CHLORIDE ION, Diguanylate cyclase (GGDEF) domain-containing protein
著者Gourinchas, G, Winkler, A.
登録日2019-07-18
公開日2019-12-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Distinct chromophore-protein environments enable asymmetric activation of a bacteriophytochrome-activated diguanylate cyclase.
J.Biol.Chem., 295, 2020
6SAX
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BU of 6sax by Molmil
Chromophore binding domain of bacteriophytochrome linked diguanylyl cyclase from Idiomarina species A28L (Pr-state monomer).
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Diguanylate cyclase (GGDEF) domain-containing protein
著者Gourinchas, G, Winkler, A.
登録日2019-07-18
公開日2019-12-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct chromophore-protein environments enable asymmetric activation of a bacteriophytochrome-activated diguanylate cyclase.
J.Biol.Chem., 295, 2020
5M27
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BU of 5m27 by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
分子名称: Beta subunit of photoactivated adenylyl cyclase, CALCIUM ION, CHLORIDE ION, ...
著者Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
登録日2016-10-12
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5M2A
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BU of 5m2a by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
分子名称: Beta subunit of photoactivated adenylyl cyclase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
著者Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
登録日2016-10-12
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBD
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BU of 5mbd by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
分子名称: Beta subunit of photoactivated adenylyl cyclase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
著者Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
登録日2016-11-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBJ
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BU of 5mbj by Molmil
Structure of a bacterial light-regulated adenylyl cyclase
分子名称: Beta subunit of photoactivated adenylyl cyclase, FLAVIN MONONUCLEOTIDE
著者Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
登録日2016-11-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017

 

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