Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2FE3
DownloadVisualize
BU of 2fe3 by Molmil
The crystal structure of bacillus subtilis PerR-Zn reveals a novel Zn(Cys)4 Structural redox switch
Descriptor: Peroxide operon regulator, ZINC ION
Authors:Traore, D.A.K.
Deposit date:2005-12-15
Release date:2006-12-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the apo-PerR-Zn protein from Bacillus subtilis.
Mol.Microbiol., 61, 2006
5VFX
DownloadVisualize
BU of 5vfx by Molmil
Structure of an accessory protein of the pCW3 relaxosome in complex with the origin of transfer (oriT) DNA
Descriptor: TcpK, oriT
Authors:Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C.
Deposit date:2017-04-10
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Nat Commun, 9, 2018
5VFY
DownloadVisualize
BU of 5vfy by Molmil
Structure of an accessory protein of the pCW3 relaxosome
Descriptor: TcpK
Authors:Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C.
Deposit date:2017-04-10
Release date:2018-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Nat Commun, 9, 2018
6O1Z
DownloadVisualize
BU of 6o1z by Molmil
Structure of pCW3 conjugation coupling protein TcpA hexagonal crystal form
Descriptor: DNA translocase coupling protein
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1Y
DownloadVisualize
BU of 6o1y by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomeric form with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA translocase coupling protein, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1W
DownloadVisualize
BU of 6o1w by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer orthorhombic crystal form
Descriptor: DNA translocase coupling protein, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1X
DownloadVisualize
BU of 6o1x by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer form with ATPgS
Descriptor: DNA translocase coupling protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
7BCW
DownloadVisualize
BU of 7bcw by Molmil
Structure of MsbA in Salipro with ADP vanadate
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent lipid A-core flippase, ...
Authors:Traore, D.A.K, Tidow, H.
Deposit date:2020-12-21
Release date:2022-01-12
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of MsbA in saposin-lipid nanoparticles (Salipro) provides insights into nucleotide coordination.
Febs J., 289, 2022
3F8N
DownloadVisualize
BU of 3f8n by Molmil
Crystal structure of PerR-Zn-Mn
Descriptor: MANGANESE (II) ION, Peroxide operon regulator, ZINC ION
Authors:Traore, D.A.K, Ferrer, J.-L, Jacquamet, L, Duarte, V, Latour, J.-M.
Deposit date:2008-11-13
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding
Mol.Microbiol., 73, 2009
3VKE
DownloadVisualize
BU of 3vke by Molmil
Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Descriptor: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1
Authors:Traore, D.A.K, Wilce, M.C.J, Wilce, J.A.
Deposit date:2011-11-15
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
2WCI
DownloadVisualize
BU of 2wci by Molmil
Structure of E. coli monothiol glutaredoxin GRX4 homodimer
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLUTAREDOXIN-4, GLUTATHIONE, ...
Authors:Iwema, T, Picchiocci, A, Traore, D.A.K, Ferrer, J.-L, Chauvat, F, Jacquamet, L.
Deposit date:2009-03-12
Release date:2009-06-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Delivery of the Intact [Fe2S2] Cluster by Monothiol Glutaredoxin.
Biochemistry, 48, 2009
2WHG
DownloadVisualize
BU of 2whg by Molmil
Crystal Structure of the Di-Zinc Metallo-beta-lactamase VIM-4 from Pseudomonas aeruginosa
Descriptor: CITRATE ANION, VIM-4 METALLO-BETA-LACTAMASE, ZINC ION
Authors:Lassaux, P, Traore, D.A.K, Galleni, M, Ferrer, J.L.
Deposit date:2009-05-05
Release date:2010-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Characterization of the Subclass B1 Metallo-{Beta}-Lactamase Vim-4.
Antimicrob.Agents Chemother., 55, 2011
2RGV
DownloadVisualize
BU of 2rgv by Molmil
The crystal structure of PerR-Ox highlights 2-oxo-Histidine formation
Descriptor: Peroxide operon regulator, ZINC ION
Authors:Traore, D.A.K.
Deposit date:2007-10-05
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and functional characterization of 2-oxo-histidine in oxidized PerR protein.
Nat.Chem.Biol., 5, 2009
3W57
DownloadVisualize
BU of 3w57 by Molmil
Structure of a C2 domain
Descriptor: C2 domain protein, CALCIUM ION
Authors:Traore, D.A.K, Whisstock, J.C.
Deposit date:2013-01-24
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
3W56
DownloadVisualize
BU of 3w56 by Molmil
Structure of a C2 domain
Descriptor: C2 domain protein
Authors:Traore, D.A.K, Whisstock, J.C.
Deposit date:2013-01-24
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
1ZTG
DownloadVisualize
BU of 1ztg by Molmil
human alpha polyC binding protein KH1
Descriptor: 5'-D(P*CP*CP*CP*TP*CP*CP*CP*T)-3', POLY(RC)-BINDING PROTEIN 1
Authors:Sidiqi, M, Wilce, J.A, Barker, A, Schmidgerger, J, Leedman, P.J, Wilce, M.C.J.
Deposit date:2005-05-27
Release date:2006-05-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
4V2T
DownloadVisualize
BU of 4v2t by Molmil
Membrane embedded pleurotolysin pore with 13 fold symmetry
Descriptor: PLEUROTOLYSIN A, PLEUROTOLYSIN B
Authors:Lukoyanova, N, Kondos, S.C, Farabella, I, Law, R.H.P, Reboul, C.F, Caradoc-Davies, T.T, Spicer, B.A, Kleifeld, O, Perugini, M, Ekkel, S, Hatfaludi, T, Oliver, K, Hotze, E.M, Tweten, R.K, Whisstock, J.C, Topf, M, Dunstone, M.A, Saibil, H.R.
Deposit date:2014-10-15
Release date:2015-02-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin.
Plos Biol., 13, 2015
9FFG
DownloadVisualize
BU of 9ffg by Molmil
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Byrom, L, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography
To be published
9FFH
DownloadVisualize
BU of 9ffh by Molmil
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography
To be published
3RKX
DownloadVisualize
BU of 3rkx by Molmil
Structural characterisation of staphylococcus aureus biotin protein ligase
Descriptor: Biotin-[acetyl-CoA-carboxylase] ligase
Authors:Wilce, M.C.J.
Deposit date:2011-04-18
Release date:2012-04-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterisation of staphylococcus aureus biotin protein ligase
TO BE PUBLISHED
3RKW
DownloadVisualize
BU of 3rkw by Molmil
Structural characterisation of staphylococcus aureus biotin protein ligase
Descriptor: BIOTINYL-5-AMP, Biotin-[acetyl-CoA-carboxylase] ligase
Authors:Wilce, M.C.J, Pendini, N.R, Yap, M.Y.
Deposit date:2011-04-18
Release date:2012-04-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural characterisation of staphylococcus aureus biotin protein ligase
To be published
3RKY
DownloadVisualize
BU of 3rky by Molmil
Structural characterisation of staphylococcus aureus biotin protein ligase
Descriptor: BIOTIN, Biotin-[acetyl-CoA-carboxylase] ligase
Authors:Wilce, M.C.J.
Deposit date:2011-04-18
Release date:2012-04-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.232 Å)
Cite:Structural characterisation of staphylococcus aureus biotin protein ligase
To be Published
4PPK
DownloadVisualize
BU of 4ppk by Molmil
Crystal structure of eCGP123 T69V variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
4PPJ
DownloadVisualize
BU of 4ppj by Molmil
Crystal structure of Phanta, a weakly fluorescent photochromic GFP-like protein. ON state
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
4PPL
DownloadVisualize
BU of 4ppl by Molmil
Crystal structure of eCGP123 H193Q variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015

 

12>

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon