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6IWH
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BU of 6iwh by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with C14-GGGI lipopeptide
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, C14-GGGI lipopeptide, ...
Authors:Yamamoto, Y, Morita, D, Sugita, M.
Deposit date:2018-12-05
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification and Structure of an MHC Class I-Encoded Protein with the Potential to PresentN-Myristoylated 4-mer Peptides to T Cells.
J Immunol., 202, 2019
6IWG
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BU of 6iwg by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with N-myristoylated 4-mer lipopeptide derived from SIV nef protein
Descriptor: 1,2-ETHANEDIOL, BORIC ACID, Beta-2-microglobulin, ...
Authors:Yamamoto, Y, Morita, D, Sugita, M.
Deposit date:2018-12-05
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification and Structure of an MHC Class I-Encoded Protein with the Potential to PresentN-Myristoylated 4-mer Peptides to T Cells.
J Immunol., 202, 2019
7CCS
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BU of 7ccs by Molmil
Consensus mutated xCT-CD98hc complex
Descriptor: 4F2 cell-surface antigen heavy chain, Consensus mutated Anionic Amino Acid Transporter Light Chain, Xc- System
Authors:Oda, K, Lee, Y, Takemoto, M, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2020-06-17
Release date:2020-12-09
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Consensus mutagenesis approach improves the thermal stability of system x c - transporter, xCT, and enables cryo-EM analyses.
Protein Sci., 29, 2020
5B6S
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BU of 5b6s by Molmil
Catalytic domain of Coprinopsis cinerea GH62 alpha-L-arabinofuranosidase
Descriptor: CALCIUM ION, GLYCEROL, Glycosyl hydrolase family 62 protein
Authors:Tonozuka, T.
Deposit date:2016-06-01
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Catalytic Domain of alpha-L-Arabinofuranosidase from Coprinopsis cinerea, CcAbf62A, Provides Insights into Structure-Function Relationships in Glycoside Hydrolase Family 62
Appl. Biochem. Biotechnol., 181, 2017
5B6T
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BU of 5b6t by Molmil
Catalytic domain of Coprinopsis cinerea GH62 alpha-L-arabinofuranosidase complexed with Pb
Descriptor: CALCIUM ION, GLYCEROL, Glycosyl hydrolase family 62 protein, ...
Authors:Tonozuka, T.
Deposit date:2016-06-01
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure of the Catalytic Domain of alpha-L-Arabinofuranosidase from Coprinopsis cinerea, CcAbf62A, Provides Insights into Structure-Function Relationships in Glycoside Hydrolase Family 62
Appl. Biochem. Biotechnol., 181, 2017
6JJU
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BU of 6jju by Molmil
Structure of Ca2+ ATPase
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Inoue, M, Sakuta, N, Watanabe, S, Inaba, K.
Deposit date:2019-02-27
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
7C24
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BU of 7c24 by Molmil
Glycosidase F290Y at pH8.0
Descriptor: AMMONIUM ION, GLYCEROL, Isomaltose glucohydrolase
Authors:Tagami, T, Kikuchi, A, Okuyama, M, Kimura, A.
Deposit date:2020-05-07
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
7C25
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BU of 7c25 by Molmil
Glycosidase Wild Type at pH8.0
Descriptor: AMMONIUM ION, CITRIC ACID, GLYCEROL, ...
Authors:Tagami, T, Kikuchi, A, Okuyama, M, Kimura, A.
Deposit date:2020-05-07
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.505 Å)
Cite:Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
7C26
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BU of 7c26 by Molmil
Glycosidase Wild Type at pH4.5
Descriptor: AMMONIUM ION, CITRIC ACID, GLYCEROL, ...
Authors:Tagami, T, Kikuchi, A, Okuyama, M, Kimura, A.
Deposit date:2020-05-07
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
7C27
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BU of 7c27 by Molmil
Glycosidase F290Y at pH4.5
Descriptor: AMMONIUM ION, CITRIC ACID, GLYCEROL, ...
Authors:Tagami, T, Kikuchi, A, Okuyama, M, Kimura, A.
Deposit date:2020-05-07
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
2P6O
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BU of 2p6o by Molmil
Crystal structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase
Authors:Yamamoto, H, Taketa, M, Tanaka, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-19
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
2PCM
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BU of 2pcm by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: DIPHTHINE SYNTHASE, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Yamamoto, H, Taketa, M, Tanaka, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
1WT5
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BU of 1wt5 by Molmil
The Crystal Structure Of A Humanized Antibody Fv 528
Descriptor: ANTI EGFR ANTIBODY FV REGION
Authors:Makabe, K, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I.
Deposit date:2004-11-16
Release date:2005-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528
J.Biol.Chem., 283, 2008
8I90
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BU of 8i90 by Molmil
Structure of flavone 4'-O-glucoside 7-O-glucosyltransferase from Nemophila menziesii, complex with UDP-glucose
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2023-02-06
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of ligand recognition specificity of flavone glucosyltransferases in Nemophila menziesii.
Arch.Biochem.Biophys., 753, 2024
8I94
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BU of 8i94 by Molmil
Structure of flavone 4'-O-glucoside 7-O-glucosyltransferase from Nemophila menziesii, complex with luteolin
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, Glycosyltransferase, SULFATE ION
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2023-02-06
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Molecular basis of ligand recognition specificity of flavone glucosyltransferases in Nemophila menziesii.
Arch.Biochem.Biophys., 753, 2024
8I8Z
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BU of 8i8z by Molmil
Structure of flavone 4'-O-glucoside 7-O-glucosyltransferase from Nemophila menziesii, apo form
Descriptor: Glycosyltransferase, SULFATE ION
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2023-02-06
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of ligand recognition specificity of flavone glucosyltransferases in Nemophila menziesii.
Arch.Biochem.Biophys., 753, 2024
5YO8
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BU of 5yo8 by Molmil
Crystal structure of beta-C25/C30/C35-prene synthase
Descriptor: Tetraprenyl-beta-curcumene synthase
Authors:Fujihashi, M, Miki, K.
Deposit date:2017-10-27
Release date:2018-05-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass.
Chem Sci, 9, 2018
2EJJ
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BU of 2ejj by Molmil
Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
to be published
2E4R
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BU of 2e4r by Molmil
Mutant I253M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-15
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutant I253M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EJK
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BU of 2ejk by Molmil
Mutant L38M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutant L38M structure of PH0725 from Pyrococcus horikoshii OT3
to be published
2EMU
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BU of 2emu by Molmil
Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EN5
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BU of 2en5 by Molmil
Mutant R262H structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mutant R262H structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2E4N
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BU of 2e4n by Molmil
Mutant V251M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-13
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mutant V251M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EH2
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BU of 2eh2 by Molmil
Mutant V18M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutant V18M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
6LA0
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BU of 6la0 by Molmil
Crystal structure of AoRut
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoside hydrolase family 5
Authors:Koseki, T, Makabe, K.
Deposit date:2019-11-11
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Aspergillus oryzae Rutinosidase: Biochemical and Structural Investigation.
Appl.Environ.Microbiol., 87, 2021

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