Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7XBD
DownloadVisualize
BU of 7xbd by Molmil
Cryo-EM structure of human galanin receptor 2
Descriptor: Galanin, Galanin receptor type 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Ishimoto, N, Kita, S, Park, S.Y.
Deposit date:2022-03-21
Release date:2022-07-13
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structure of the human galanin receptor 2 bound to galanin and Gq reveals the basis of ligand specificity and how binding affects the G-protein interface.
Plos Biol., 20, 2022
5X4T
DownloadVisualize
BU of 5x4t by Molmil
PAC from Oscillatoria acuminata after 20 seconds photoactivation
Descriptor: FLAVIN MONONUCLEOTIDE, Photoactivated adenylyl cyclase
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-14
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X4V
DownloadVisualize
BU of 5x4v by Molmil
Roseoflavin substituted OaPAC
Descriptor: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, Photoactivated adenylyl cyclase
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-14
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X2S
DownloadVisualize
BU of 5x2s by Molmil
Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 6.5.
Descriptor: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-02
Release date:2017-09-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
6F0Q
DownloadVisualize
BU of 6f0q by Molmil
Crystal structure of Pizza6-AYW
Descriptor: Pizza6-AYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6F0S
DownloadVisualize
BU of 6f0s by Molmil
Crystal structure of Pizza6-SYW
Descriptor: Pizza6-SYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6F0T
DownloadVisualize
BU of 6f0t by Molmil
Crystal structure of Pizza6-SFW
Descriptor: GLYCEROL, Pizza6-SFW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
1B5H
DownloadVisualize
BU of 1b5h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOPROPANOIC ACID-LYSINE
Descriptor: LYS-DPP-LYS PEPTIDE, OLIGO-PEPTIDE BINDING PROTEIN, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-13
Release date:1998-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B4H
DownloadVisualize
BU of 1b4h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOBUTYRIC ACID-LYSINE
Descriptor: LYS-DAB-LYS PEPTIDE, PERIPLASMIC OLIGO-PEPTIDE BINDING PROTEIN, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-11
Release date:1998-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B6H
DownloadVisualize
BU of 1b6h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORVALYL-LYSINE
Descriptor: LYS-NVA-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-13
Release date:1998-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B7H
DownloadVisualize
BU of 1b7h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORLEUCYL-LYSINE
Descriptor: LYS-NLE-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-16
Release date:1998-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B2H
DownloadVisualize
BU of 1b2h by Molmil
Oligo-Peptide Binding Protein Complexed with Lysyl-Ornithyl-Lysine
Descriptor: ACETATE ION, LYS-ORN-LYS, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, ...
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-16
Release date:1998-11-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B1H
DownloadVisualize
BU of 1b1h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN/TRIPEPTIDE (LYS HPE LYS) COMPLEX
Descriptor: PROTEIN (LYS HPE LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-10
Release date:1998-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B3H
DownloadVisualize
BU of 1b3h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-CYCLOHEXYLALANYL-LYSINE
Descriptor: LYS-ALC-LYS PEPTIDE, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-16
Release date:1998-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1JEU
DownloadVisualize
BU of 1jeu by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KEK
Descriptor: OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS GLU LYS, URANYL (VI) ION
Authors:Tame, J, Wilkinson, A.J.
Deposit date:1996-07-03
Release date:1997-05-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The role of water in sequence-independent ligand binding by an oligopeptide transporter protein.
Nat.Struct.Biol., 3, 1996
1JEV
DownloadVisualize
BU of 1jev by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK
Descriptor: OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS TRP LYS, URANYL (VI) ION
Authors:Tame, J, Wilkinson, A.J.
Deposit date:1996-07-03
Release date:1997-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The role of water in sequence-independent ligand binding by an oligopeptide transporter protein.
Nat.Struct.Biol., 3, 1996
1JET
DownloadVisualize
BU of 1jet by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KAK
Descriptor: OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS ALA LYS, URANYL (VI) ION
Authors:Tame, J, Wilkinson, A.J.
Deposit date:1996-07-03
Release date:1997-05-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The role of water in sequence-independent ligand binding by an oligopeptide transporter protein.
Nat.Struct.Biol., 3, 1996
1B0H
DownloadVisualize
BU of 1b0h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NAPTHYLALANYL-LYSINE
Descriptor: LYS-ALN-LYS PEPTIDE, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANIUM ATOM
Authors:Davies, T.G, Tame, J.R.H.
Deposit date:1998-11-10
Release date:1998-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
2ZD0
DownloadVisualize
BU of 2zd0 by Molmil
Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP)
Descriptor: TRYPTOPHAN, Transcription attenuation protein mtrB
Authors:Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
Deposit date:2007-11-15
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2ZP9
DownloadVisualize
BU of 2zp9 by Molmil
The Nature of the TRAP:Anti-TRAP complex
Descriptor: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
Authors:Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
Deposit date:2008-07-08
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZP8
DownloadVisualize
BU of 2zp8 by Molmil
The Nature of the TRAP:Anti-TRAP complex
Descriptor: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
Authors:Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
Deposit date:2008-07-08
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZCZ
DownloadVisualize
BU of 2zcz by Molmil
Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP)
Descriptor: TRYPTOPHAN, Transcription attenuation protein mtrB
Authors:Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
Deposit date:2007-11-15
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2ZTT
DownloadVisualize
BU of 2ztt by Molmil
Crystal Structure of RNA polymerase PB1-PB2 subunits from Influenza A Virus
Descriptor: Polymerase basic protein 2, RNA-directed RNA polymerase catalytic subunit
Authors:Sugiyama, K, Obayashi, E, Park, S.-Y.
Deposit date:2008-10-08
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the essential PB1-PB2 subunit contact of the influenza virus RNA polymerase
Embo J., 28, 2009
3A1G
DownloadVisualize
BU of 3a1g by Molmil
High-Resolution Crystal Structure of RNA polymerase PB1-PB2 subunits from Influenza A Virus
Descriptor: Polymerase basic protein 2, RNA-directed RNA polymerase catalytic subunit
Authors:Sugiyama, K, Park, S.-Y, Obayashi, E.
Deposit date:2009-04-02
Release date:2009-06-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into the essential PB1-PB2 subunit contact of the influenza virus RNA polymerase
Embo J., 28, 2009
1UEB
DownloadVisualize
BU of 1ueb by Molmil
Crystal structure of translation elongation factor P from Thermus thermophilus HB8
Descriptor: elongation factor P
Authors:Hanawa-Suetsugu, K, Sekine, S, Sakai, H, Hori-Takemoto, C, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-09
Release date:2004-05-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of elongation factor P from Thermus thermophilus HB8
Proc.Natl.Acad.Sci.USA, 101, 2004

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon