Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5IX7
DownloadVisualize
BU of 5ix7 by Molmil
Crystal structure of metallo-DNA nanowire with infinite one-dimensional silver array
Descriptor: DNA (5'-D(*GP*GP*AP*CP*TP*(CBR)P*GP*AP*CP*TP*CP*C)-3'), POTASSIUM ION, SILVER ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Hattori, Y, Saneyoshi, H, Ono, A, Tanaka, Y.
Deposit date:2016-03-23
Release date:2017-07-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:A metallo-DNA nanowire with uninterrupted one-dimensional silver array
Nat Chem, 9, 2017
5AY4
DownloadVisualize
BU of 5ay4 by Molmil
Crystal structure of RNA duplex containing C-C base pairs obtained in the presence of Hg(II)
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3'), SODIUM ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
5AY3
DownloadVisualize
BU of 5ay3 by Molmil
Crystal structure of RNA duplex containing C-C base pairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*A*CP*UP*CP*C)-3')
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
5AY2
DownloadVisualize
BU of 5ay2 by Molmil
Crystal structure of RNA duplex containing C-Ag(I)-C base pairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3'), SILVER ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
7EAY
DownloadVisualize
BU of 7eay by Molmil
DNA containing Cu(II)-mediated 4-N-carboxymethylcytosine base pairs
Descriptor: COBALT (II) ION, COBALT HEXAMMINE(III), COPPER (II) ION, ...
Authors:Kondo, J, Terashima, A, Yoshimura, A, Tada, Y, Ono, A.
Deposit date:2021-03-08
Release date:2022-03-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA containing Cu(II)-mediated 4-N-carboxymethylcytosine base pairs
To Be Published
7EDT
DownloadVisualize
BU of 7edt by Molmil
RNA duplex containing CC mispairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*CP*CP*GP*GP*(5BU)P*CP*C)-3'), SODIUM ION, SPERMINE
Authors:Kondo, J, Tada, Y.
Deposit date:2021-03-17
Release date:2022-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:RNA duplex containing CC mispairs
To Be Published
4ZY3
DownloadVisualize
BU of 4zy3 by Molmil
Crystal Structure of Keap1 in Complex with a small chemical compound, K67
Descriptor: FORMIC ACID, Kelch-like ECH-associated protein 1, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
Authors:Fukutomi, T, Iso, T, Suzuki, T, Takagi, K, Mizushima, T, Komatsu, M, Yamamoto, M.
Deposit date:2015-05-21
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
Nat Commun, 7, 2016
1CVZ
DownloadVisualize
BU of 1cvz by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PAPAIN WITH CLIK148(CATHEPSIN L SPECIFIC INHIBITOR)
Descriptor: N1-(1-DIMETHYLCARBAMOYL-2-PHENYL-ETHYL)-2-OXO-N4-(2-PYRIDIN-2-YL-ETHYL)-SUCCINAMIDE, PAPAIN
Authors:Tsuge, H.
Deposit date:1999-08-24
Release date:2000-08-30
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition mechanism of cathepsin L-specific inhibitors based on the crystal structure of papain-CLIK148 complex.
Biochem.Biophys.Res.Commun., 266, 1999
3UMW
DownloadVisualize
BU of 3umw by Molmil
Crystal structure of Pim1 kinase in complex with inhibitor (Z)-2-[(1H-indazol-3-yl)methylene]-6-methoxy-7-(piperazin-1-ylmethyl)benzofuran-3(2H)-one
Descriptor: (2Z)-2-(1H-indazol-3-ylmethylidene)-6-methoxy-7-(piperazin-1-ylmethyl)-1-benzofuran-3(2H)-one, GLYCEROL, Proto-oncogene serine/threonine-protein kinase pim-1, ...
Authors:Parker, L.J, Handa, N, Yokoyama, S.
Deposit date:2011-11-14
Release date:2012-10-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Rational evolution of a novel type of potent and selective proviral integration site in Moloney murine leukemia virus kinase 1 (PIM1) inhibitor from a screening-hit compound.
J.Med.Chem., 55, 2012

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon