Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4EVM
DownloadVisualize
BU of 4evm by Molmil
1.5 Angstrom crystal structure of soluble domain of membrane-anchored thioredoxin family protein from Streptococcus pneumoniae strain Canada MDR_19A
Descriptor: Thioredoxin family protein
Authors:Wawrzak, Z, Stogios, P.J, Minasov, G, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-26
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.506 Å)
Cite:1.5 Angstrom crystal structure of soluble domain of membrane-anchored thioredoxin family protein from Streptococcus pneumoniae strain Canada MDR_19A
To be Published
4EQB
DownloadVisualize
BU of 4eqb by Molmil
1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Minasov, G, Wawrzak, Z, Stogios, P.J, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.
TO BE PUBLISHED
4EQ9
DownloadVisualize
BU of 4eq9 by Molmil
1.4 Angstrom Crystal Structure of ABC Transporter Glutathione-Binding Protein GshT from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Glutathione
Descriptor: ABC transporter substrate-binding protein-amino acid transport, GLUTATHIONE
Authors:Minasov, G, Wawrzak, Z, Stogios, P.J, Light, S.H, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:1.4 Angstrom Crystal Structure of Putative ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Glutathione.
TO BE PUBLISHED
4GNR
DownloadVisualize
BU of 4gnr by Molmil
1.0 Angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein LivJ from Streptococcus pneumoniae str. Canada MDR_19A in complex with Isoleucine
Descriptor: ABC transporter substrate-binding protein-branched chain amino acid transport, CHLORIDE ION, ISOLEUCINE, ...
Authors:Halavaty, A.S, Kudritska, M, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-17
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:1.0 Angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein LivJ from Streptococcus pneumoniae str. Canada MDR_19A in complex with Isoleucine
To be Published
8SDC
DownloadVisualize
BU of 8sdc by Molmil
Crystal structure of fluoroacetate dehalogenase Daro3835 apoenzyme
Descriptor: Alpha/beta hydrolase fold protein, CHLORIDE ION
Authors:Stogios, P.J, Skarina, T, Khusnutdinova, A, Iakounine, A, Savchenko, A.
Deposit date:2023-04-06
Release date:2023-09-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural insights into hydrolytic defluorination of difluoroacetate by microbial fluoroacetate dehalogenases.
Febs J., 290, 2023
8SDD
DownloadVisualize
BU of 8sdd by Molmil
Crystal structure of fluoroacetate dehalogenase Daro3835 H274N mutant with D107-glycolyl intermediate
Descriptor: Alpha/beta hydrolase fold protein
Authors:Stogios, P.J, Skarina, T, Khusnutdinova, A, Iakounine, A, Savchenko, A.
Deposit date:2023-04-06
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into hydrolytic defluorination of difluoroacetate by microbial fluoroacetate dehalogenases.
Febs J., 290, 2023
3VCR
DownloadVisualize
BU of 3vcr by Molmil
Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica
Descriptor: PYRUVIC ACID, putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase
Authors:Stogios, P.J, Kagan, O, Di Leo, R, Yim, V, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-04
Release date:2012-01-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
3VDH
DownloadVisualize
BU of 3vdh by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14
Descriptor: B-1,4-endoglucanase, CHLORIDE ION
Authors:Stogios, P.J, Evdokimova, E, Egorova, O, Yim, V, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-05
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
7TOK
DownloadVisualize
BU of 7tok by Molmil
Crystal structure of the CBM domain of carbohydrate esterase FjoAcXE
Descriptor: Acetylxylan esterase I
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
7TOJ
DownloadVisualize
BU of 7toj by Molmil
Crystal structure of carbohydrate esterase CspAcXE, apoenzyme
Descriptor: CHLORIDE ION, SGNH/GDSL hydrolase family protein
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
7TOH
DownloadVisualize
BU of 7toh by Molmil
Crystal structure of carbohydrate esterase PbeAcXE, in complex with MeGlcpA-Xylp
Descriptor: 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-beta-D-xylopyranose, SGNH hydrolase
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
7TOI
DownloadVisualize
BU of 7toi by Molmil
Crystal structure of carbohydrate esterase PbeAcXE, in complex with acetate
Descriptor: ACETATE ION, SGNH hydrolase
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
7TOG
DownloadVisualize
BU of 7tog by Molmil
Crystal structure of carbohydrate esterase PbeAcXE, apoenzyme
Descriptor: SGNH hydrolase
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
6OZ1
DownloadVisualize
BU of 6oz1 by Molmil
Crystal structure of the adenylation (A) domain of the carboxylate reductase (CAR) GR01_22995 from Mycobacterium chelonae
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Fedorchuk, T, Khusnutdinova, A, Yakunin, A.F, Savchenko, A.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:One-Pot Biocatalytic Transformation of Adipic Acid to 6-Aminocaproic Acid and 1,6-Hexamethylenediamine Using Carboxylic Acid Reductases and Transaminases.
J.Am.Chem.Soc., 142, 2020
8EZR
DownloadVisualize
BU of 8ezr by Molmil
Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, native protein
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, HipS(Lp), ...
Authors:Stogios, P.J, Skarina, T, Michalska, K, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-11-01
Release date:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, native protein
To Be Published
4W8K
DownloadVisualize
BU of 4w8k by Molmil
Crystal structure of a putative Cas1 enzyme from Vibrio phage ICP1
Descriptor: Cas1 protein, POTASSIUM ION
Authors:Stogios, P.J, Wawrzak, Z, Onopriyeno, O, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-25
Release date:2014-09-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:To be published
To Be Published
7U5U
DownloadVisualize
BU of 7u5u by Molmil
Structure of the SK/DHQase/DHSD dimer from Candida albicans Aro1
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
7U5S
DownloadVisualize
BU of 7u5s by Molmil
CryoEM structure of the Candida albicans Aro1 dimer
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
7U5T
DownloadVisualize
BU of 7u5t by Molmil
Structure of DHQS/EPSPS dimer from Candida albicans Aro1
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
3V77
DownloadVisualize
BU of 3v77 by Molmil
Crystal structure of a putative fumarylacetoacetate isomerase/hydrolase from Oleispira antarctica
Descriptor: ACETATE ION, D(-)-TARTARIC ACID, Putative fumarylacetoacetate isomerase/hydrolase, ...
Authors:Stogios, P.J, Kagan, O, Di Leo, R, Bochkarev, A, Edwards, A.M, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-12-20
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
5JD6
DownloadVisualize
BU of 5jd6 by Molmil
Crystal structure of MGS-MChE2, an alpha/beta hydrolase enzyme from the metagenome of sediments from the lagoon of Mar Chica, Morocco
Descriptor: MGS-MChE2
Authors:Stogios, P.J, Xu, X, Nocek, B, Yim, V, Cui, H, Martinez-Martinez, M, Golyshin, P.N, Yakima, M.M, Ferrer, M, Savchenko, A.
Deposit date:2016-04-15
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.463 Å)
Cite:Crystal structure of MGS-MChE2, an alpha/beta hydrolase enzyme from the metagenome of sediments from the lagoon of Mar Chica, Morocco
To Be Published
6UHX
DownloadVisualize
BU of 6uhx by Molmil
Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized oxidoreductase YIR035C
Authors:Stogios, P.J, Skarina, T, Chen, C, Kagan, O, Iakounine, A, Savchenko, A.
Deposit date:2019-09-29
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae
To Be Published
5IR0
DownloadVisualize
BU of 5ir0 by Molmil
Crystal structure of protein of unknown function ORF19 from Vibrio cholerae O1 PICI-like element, C57S I109M mutant
Descriptor: CITRIC ACID, Uncharacterized protein ORF19
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Di Leo, R, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-03-11
Release date:2016-03-30
Method:X-RAY DIFFRACTION (3.297 Å)
Cite:Crystal structure of protein of unknown function ORF19 from Vibrio cholerae O1 PICI-like element, C57S I109M mutant
To Be Published
5JD4
DownloadVisualize
BU of 5jd4 by Molmil
Crystal structure of LAE6 Ser161Ala mutant, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, BENZAMIDINE, CHLORIDE ION, ...
Authors:Stogios, P.J, Xu, X, Alcaide, M, Yim, V, Cui, H, Martinez-Martinez, M, Ferrer, M, Savchenko, A.
Deposit date:2016-04-15
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of LAE6 Ser161Ala mutant, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain
To Be Published
5JD3
DownloadVisualize
BU of 5jd3 by Molmil
Crystal structure of LAE5, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, LAE5, ...
Authors:Stogios, P.J, Xu, X, Nocek, B, Cui, H, Yim, V, Martinez-Martinez, M, Alcaide, M, Ferrer, M, Savchenko, A.
Deposit date:2016-04-15
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:To be published
To Be Published

220113

건을2024-05-22부터공개중

PDB statisticsPDBj update infoContact PDBjnumon