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8DGG
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BU of 8dgg by Molmil
Structure of glycosylated LAG-3 homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Silberstein, J.L, Mathews, I.I, Frank, J.A, Chan, K.-W, Fernandez, D, Du, J, Wang, J, Kong, X.-P, Cochran, J.R.
Deposit date:2022-06-23
Release date:2022-08-17
Last modified:2022-08-31
Method:X-RAY DIFFRACTION (3.78 Å)
Cite:Structural basis for LAG-3 dimeric association and inhibition of T cell function
To Be Published
1A2C
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BU of 1a2c by Molmil
Structure of thrombin inhibited by AERUGINOSIN298-A from a BLUE-GREEN ALGA
Descriptor: Aeruginosin 298-A, Hirudin variant-2, SODIUM ION, ...
Authors:Rios-Steiner, J.L, Murakami, M, Tulinsky, A.
Deposit date:1997-12-26
Release date:1998-07-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Thrombin Inhibited by Aeruginosin 298-A from a Blue-Green Alga
J.Am.Chem.Soc., 120, 1998
7UZF
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BU of 7uzf by Molmil
Rat Kidney V-ATPase with SidK, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZI
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BU of 7uzi by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZH
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BU of 7uzh by Molmil
Rat Kidney V-ATPase with SidK, State 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZG
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BU of 7uzg by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
1B8X
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BU of 1b8x by Molmil
GLUTATHIONE S-TRANSFERASE FUSED WITH THE NUCLEAR MATRIX TARGETING SIGNAL OF THE TRANSCRIPTION FACTOR AML-1
Descriptor: PROTEIN (AML-1B)
Authors:Tang, L, Guo, B, Van Wijnen, A.J, Lian, J.B, Stein, J.L, Stein, G.S, Zhou, G.W.
Deposit date:1999-02-03
Release date:1999-04-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Preliminary crystallographic study of glutathione S-transferase fused with the nuclear matrix targeting signal of the transcription factor AML-1/CBF-alpha2.
J.Struct.Biol., 123, 1998
5VCA
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BU of 5vca by Molmil
VCP like ATPase from T. acidophilum (VAT)-Substrate bound conformation
Descriptor: VCP-like ATPase
Authors:Ripstein, Z.A, Huang, R, Augustyniak, R, Kay, L.E, Rubinstein, J.L.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of a AAA+ unfoldase in the process of unfolding substrate.
Elife, 6, 2017
6VQG
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BU of 6vqg by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 2 (from focused refinement)
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQC
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BU of 6vqc by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 1 (from focused refinement)
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQK
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BU of 6vqk by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)
Descriptor: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ8
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BU of 6vq8 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 3 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
7TAP
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BU of 7tap by Molmil
Cryo-EM structure of archazolid A bound to yeast VO V-ATPase
Descriptor: Archazolid A, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
Deposit date:2021-12-21
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
7TAO
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BU of 7tao by Molmil
Cryo-EM structure of bafilomycin A1 bound to yeast VO V-ATPase
Descriptor: (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
Deposit date:2021-12-21
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
5KGF
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BU of 5kgf by Molmil
Structural model of 53BP1 bound to a ubiquitylated and methylated nucleosome, at 4.5 A resolution
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:Wilson, M.D, Benlekbir, S, Sicheri, F, Rubinstein, J.L, Durocher, D.
Deposit date:2016-06-13
Release date:2016-07-27
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:The structural basis of modified nucleosome recognition by 53BP1.
Nature, 536, 2016
9B8Q
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BU of 9b8q by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, peripheral stalks
Descriptor: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
Authors:Coupland, E.M, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRB
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BU of 9brb by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRD
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BU of 9brd by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRC
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BU of 9brc by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
8UX1
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BU of 8ux1 by Molmil
Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
Descriptor: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
Authors:Huang, S.K, Rubinstein, J.L, Kay, L.E.
Deposit date:2023-11-08
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
9B8O
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BU of 9b8o by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, Vo
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
7Q21
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BU of 7q21 by Molmil
III2-IV2 respiratory supercomplex from Corynebacterium glutamicum
Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Kovalova, T, Moe, A, Krol, S, Yanofsky, D.J, Bott, M, Sjostrand, D, Rubinstein, J.L, Hogbom, M, Brzezinski, P.
Deposit date:2021-10-22
Release date:2022-02-02
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The respiratory supercomplex from C. glutamicum.
Structure, 30, 2022
5VC7
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BU of 5vc7 by Molmil
VCP like ATPase from T. acidophilum (VAT) - conformation 1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, VCP-like ATPase
Authors:Ripstein, Z.A, Huang, R, Augustyniak, R, Kay, L.E, Rubinstein, J.L.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of a AAA+ unfoldase in the process of unfolding substrate.
Elife, 6, 2017
3J0J
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BU of 3j0j by Molmil
Fitted atomic models of Thermus thermophilus V-ATPase subunits into cryo-EM map
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Lau, W.C.Y, Rubinstein, J.L.
Deposit date:2011-08-24
Release date:2011-12-14
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Subnanometre-resolution structure of the intact Thermus thermophilus H+-driven ATP synthase.
Nature, 481, 2012

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