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1QE3
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PNB ESTERASE
分子名称: PARA-NITROBENZYL ESTERASE, SULFATE ION, ZINC ION
著者Spiller, B, Gershenson, A, Arnold, F, Stevens, R.
登録日1999-07-12
公開日1999-07-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A structural view of evolutionary divergence.
Proc.Natl.Acad.Sci.USA, 96, 1999
1C7I
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BU of 1c7i by Molmil
THERMOPHYLIC PNB ESTERASE
分子名称: CALCIUM ION, PROTEIN (PARA-NITROBENZYL ESTERASE)
著者Spiller, B, Gershenson, A, Arnold, F, Stevens, R.
登録日2000-02-21
公開日2000-03-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural view of evolutionary divergence.
Proc.Natl.Acad.Sci.USA, 96, 1999
1C7J
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BU of 1c7j by Molmil
PNB ESTERASE 56C8
分子名称: POTASSIUM ION, PROTEIN (PARA-NITROBENZYL ESTERASE), SULFATE ION
著者Spiller, B, Gershenson, A, Arnold, F, Stevens, R.C.
登録日2000-02-21
公開日2000-03-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structural view of evolutionary divergence.
Proc.Natl.Acad.Sci.USA, 96, 1999
3FCT
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BU of 3fct by Molmil
MATURE METAL CHELATASE CATALYTIC ANTIBODY WITH HAPTEN
分子名称: CADMIUM ION, CALCIUM ION, MAGNESIUM ION, ...
著者Romesberg, F.E, Santarsiero, B.D, Barnes, D, Yin, J, Spiller, B, Schultz, P.G, Stevens, R.C.
登録日1999-06-13
公開日1999-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and kinetic evidence for strain in biological catalysis.
Biochemistry, 37, 1998
1A4J
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BU of 1a4j by Molmil
DIELS ALDER CATALYTIC ANTIBODY GERMLINE PRECURSOR
分子名称: IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (HEAVY CHAIN), DIELS ALDER CATALYTIC ANTIBODY (LIGHT CHAIN)
著者Spiller, B.W, Romesburg, F.E, Schultz, P.G, Stevens, R.C.
登録日1998-01-30
公開日1998-05-13
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Immunological origins of binding and catalysis in a Diels-Alderase antibody.
Science, 279, 1998
1A4K
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BU of 1a4k by Molmil
DIELS ALDER CATALYTIC ANTIBODY WITH TRANSITION STATE ANALOGUE
分子名称: ANTIBODY FAB, CADMIUM ION, [4-(4-ACETYLAMINO-PHENYL)-3,5-DIOXO-4-AZA-TRICYCLO[5.2.2.0 2,6]UNDEC-1-YLCARBAMOYLOXY]-ACETIC ACID
著者Spiller, B.W, Romesburg, F.E, Schultz, P.G, Stevens, R.C.
登録日1998-01-30
公開日1998-05-13
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Immunological origins of binding and catalysis in a Diels-Alderase antibody.
Science, 279, 1998
1UOT
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BU of 1uot by Molmil
HUMAN CD55 DOMAINS 3 & 4
分子名称: COMPLEMENT DECAY-ACCELERATING FACTOR
著者Williams, P, Chaudhry, Y, Goodfellow, I.G, Billington, J, Spiller, B, Evans, D.J, Lea, S.M.
登録日2003-09-23
公開日2003-09-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mapping Cd55 Function. The Structure of Two Pathogen-Binding Domains at 1.7 A
J.Biol.Chem., 278, 2003
3HO6
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BU of 3ho6 by Molmil
Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in clostridium difficile toxin A
分子名称: INOSITOL HEXAKISPHOSPHATE, Toxin A
著者Pruitt, R.N, Lacy, D.B.
登録日2009-06-01
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in Clostridium difficile toxin A.
J.Biol.Chem., 284, 2009
3SRZ
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BU of 3srz by Molmil
Clostridium difficile toxin A (TcdA) glucolsyltransferase domain bound to UDP-glucose
分子名称: MANGANESE (II) ION, Toxin A, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Pruitt, R.N, Chumbler, N.M, Farrow, M.A, Seeback, S.A, Friedman, D.B, Spiller, B.W, Lacy, D.B.
登録日2011-07-07
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structural Determinants of Clostridium difficile Toxin A Glucosyltransferase Activity.
J.Biol.Chem., 287, 2012
3SS1
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BU of 3ss1 by Molmil
Clostridium difficile toxin A (TcdA) glucolsyltransferase domain
分子名称: MANGANESE (II) ION, Toxin A
著者Pruitt, R.N, Chumbler, N.M, Farrow, M.A, Seeback, S.A, Friedman, D.B, Spiller, B.W, Lacy, D.B.
登録日2011-07-07
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Structural Determinants of Clostridium difficile Toxin A Glucosyltransferase Activity.
J.Biol.Chem., 287, 2012
2QV3
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BU of 2qv3 by Molmil
Crystal Structure of the Helicobacter pylori Vacuolating Toxin p55 Domain
分子名称: Vacuolating cytotoxin
著者Gangwer, K.A.
登録日2007-08-07
公開日2007-10-23
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Crystal structure of the Helicobacter pylori vacuolating toxin p55 domain
Proc.Natl.Acad.Sci.Usa, 104, 2007
1H04
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BU of 1h04 by Molmil
Human CD55 domains 3 & 4
分子名称: COMPLEMENT DECAY-ACCELERATING FACTOR, NICKEL (II) ION
著者Williams, P, Chaudhry, Y, Goodfellow, I, Billington, J, Spiller, B, Evans, D.J, Lea, S.M.
登録日2002-06-11
公開日2003-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mapping Cd55 Function. The Structure of Two Pathogen-Binding Domains at 1.7 A
J.Biol.Chem., 278, 2003
1H2P
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BU of 1h2p by Molmil
Human CD55 domains 3 & 4
分子名称: COMPLEMENT DECAY-ACCELERATING FACTOR
著者Williams, P, Chaudhry, Y, Goodfellow, I, Billington, J, Spiller, B, Evans, D.J, Lea, S.M.
登録日2002-08-13
公開日2003-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mapping Cd55 Function. The Structure of Two Pathogen-Binding Domains at 1.7 A
J.Biol.Chem., 278, 2003
1H03
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BU of 1h03 by Molmil
Human CD55 domains 3 & 4
分子名称: COMPLEMENT DECAY-ACCELERATING FACTOR
著者Williams, P, Chaudhry, Y, Goodfellow, I, Billington, J, Spiller, B, Evans, D.J, Lea, S.M.
登録日2002-06-11
公開日2003-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mapping Cd55 Function. The Structure of Two Pathogen-Binding Domains at 1.7 A
J.Biol.Chem., 278, 2003
8G72
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SARS-CoV-2 spike/Nb2 complex with 1 RBD up (local refinement at 5.6 A)
分子名称: Nanosota-2, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G74
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BU of 8g74 by Molmil
SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G75
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BU of 8g75 by Molmil
SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-4, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G73
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BU of 8g73 by Molmil
SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 bound at 2.5 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G71
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BU of 8g71 by Molmil
Spike/Nb2 complex with 1 RBD up
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献SARS-CoV-2 spike/Nb2 complex with 1 RBD up
To Be Published
8G79
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BU of 8g79 by Molmil
Local refinement of SARS-CoV-2 spike/nanobody mixture complex around RBD
分子名称: Nanosota-3, Nanosota-4, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Local refinement of SARS-CoV-2 spike/nanobody mixture complex around RBD
To Be Published
8G7B
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BU of 8g7b by Molmil
SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3
To Be Published
8G76
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SARS-CoV-2 spike/Nb5 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-5, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献SARS-CoV-2 spike/Nb5 complex
To Be Published
8G77
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SARS-CoV-2 spike/Nb6 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-6, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献SARS-CoV-2 spike/Nb6 complex
To Be Published
8G7A
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BU of 8g7a by Molmil
SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement)
To Be Published
8G7C
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BU of 8g7c by Molmil
local refinement of SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-4, Spike glycoprotein
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献local refinement of SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound
To Be Published

 

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