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6ZHI
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BU of 6zhi by Molmil
Structure of the Plasmodium falciparum Hsp70-x substrate binding domain in complex with hydrophobic peptide
Descriptor: ASN-ARG-LEU-LEU-LEU-THR-GLY, Heat shock protein 70
Authors:Schmidt, J, Vakonakis, I.
Deposit date:2020-06-23
Release date:2020-09-09
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure of the substrate-binding domain of Plasmodium falciparum heat-shock protein 70-x.
Acta Crystallogr.,Sect.F, 76, 2020
2M7J
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BU of 2m7j by Molmil
Solution Structure of a Beta-Hairpin Peptidomimetic antibiotic that target LptD in Pseudomonas sp.
Descriptor: beta-Hairpin Peptidomimetic Antibiotic TWLKKRRWKKAK(DPR)P
Authors:Moehle, K, Schmidt, J, Robinson, J.
Deposit date:2013-04-25
Release date:2013-09-11
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural studies of beta-hairpin peptidomimetic antibiotics that target LptD in Pseudomonas sp.
Bioorg.Med.Chem., 21, 2013
2M7I
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BU of 2m7i by Molmil
Solution structure of a Beta-Hairpin Peptidomimetic antibiotic that targets LptD in Pseudomonas sp.
Descriptor: Beta-Hairpin Peptidomimetic antibiotic TWL(DAB)(ORN)(DLY)RW(ORN)(DAB)AK(DPR)P
Authors:Moehle, K, Schmidt, J, Robinson, J.
Deposit date:2013-04-24
Release date:2013-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural studies of beta-hairpin peptidomimetic antibiotics that target LptD in Pseudomonas sp.
Bioorg.Med.Chem., 21, 2013
9R2O
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BU of 9r2o by Molmil
De novo designed N5 protein fold
Descriptor: N5, POTASSIUM ION, THIOCYANATE ION
Authors:Pacesa, M, Miao, Y, Georgeon, S, Schmidt, J, Correia, B.E.
Deposit date:2025-04-30
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Reimagine accessibility of protein space with generative model
To Be Published
9R2L
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BU of 9r2l by Molmil
De novo designed N37 protein fold
Descriptor: ACETATE ION, ETHANOLAMINE, N37, ...
Authors:Pacesa, M, Miao, Y, Georgeon, S, Schmidt, J, Correia, B.E.
Deposit date:2025-04-30
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reimagine accessibility of protein space with generative model
To Be Published
9R2R
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BU of 9r2r by Molmil
De novo designed M7 protein fold
Descriptor: M7r1
Authors:Pacesa, M, Miao, Y, Georgeon, S, Schmidt, J, Correia, B.E.
Deposit date:2025-04-30
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Reimagine accessibility of protein space with generative model
To Be Published
9R2K
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BU of 9r2k by Molmil
De novo designed N30 protein fold
Descriptor: N30
Authors:Pacesa, M, Miao, Y, Georgeon, S, Schmidt, J, Correia, B.E.
Deposit date:2025-04-30
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Reimagine accessibility of protein space with generative model
To Be Published
9R2V
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BU of 9r2v by Molmil
De novo designed M16 protein fold
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, FORMIC ACID, ...
Authors:Pacesa, M, Miao, Y, Georgeon, S, Schmidt, J, Correia, B.E.
Deposit date:2025-05-01
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Reimagine accessibility of protein space with generative model
To Be Published
9MER
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BU of 9mer by Molmil
Structure of H1H5:FluA20 Chimeric Influenza HA Complex
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Seraj, N.
Deposit date:2024-12-08
Release date:2025-03-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based Design of Chimeric Influenza Hemagglutinins to Elicit Cross-group Immunity.
Biorxiv, 2025
9MEV
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BU of 9mev by Molmil
Structure of H1H3:FluA20 Chimeric Antigen Complex
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Seraj, N.
Deposit date:2024-12-08
Release date:2025-03-19
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure-based Design of Chimeric Influenza Hemagglutinins to Elicit Cross-group Immunity.
Biorxiv, 2025
8OUS
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BU of 8ous by Molmil
CRYSTAL STRUCTURE OF DLK IN COMPLEX WITH COMPOUND 19
Descriptor: (1S)-1-[4-[6-azanyl-5-(trifluoromethyloxy)pyridin-3-yl]-1-(3-morpholin-4-yl-1-bicyclo[1.1.1]pentanyl)imidazol-2-yl]-2-methyl-propan-1-ol, Mitogen-activated protein kinase kinase kinase 12
Authors:Zebisch, M, McEwan, P.A, Barker, J.J, Cross, J.B.
Deposit date:2023-04-24
Release date:2023-07-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of IACS-52825, a Potent and Selective DLK Inhibitor for Treatment of Chemotherapy-Induced Peripheral Neuropathy.
J.Med.Chem., 66, 2023
8OUR
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BU of 8our by Molmil
CRYSTAL STRUCTURE OF DLK IN COMPLEX WITH COMPOUND 16
Descriptor: 5-[1-(3-morpholin-4-yl-1-bicyclo[1.1.1]pentanyl)-2-propan-2-yl-imidazol-4-yl]-3-(trifluoromethyloxy)pyridin-2-amine, Mitogen-activated protein kinase kinase kinase 12
Authors:Zebisch, M, McEwan, P.A, Barker, J.J, Cross, J.B.
Deposit date:2023-04-24
Release date:2023-07-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery of IACS-52825, a Potent and Selective DLK Inhibitor for Treatment of Chemotherapy-Induced Peripheral Neuropathy.
J.Med.Chem., 66, 2023
8OUT
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BU of 8out by Molmil
CRYSTAL STRUCTURE OF DLK IN COMPLEX WITH COMPOUND 22
Descriptor: (1R)-1-[4-[6-azanyl-5-(trifluoromethyloxy)pyridin-3-yl]-1-(3-fluoranyl-1-bicyclo[1.1.1]pentanyl)imidazol-2-yl]-2,2,2-tris(fluoranyl)ethanol, Mitogen-activated protein kinase kinase kinase 12
Authors:Zebisch, M, Akkermans, O, Barker, J.J, Cross, J.B.
Deposit date:2023-04-24
Release date:2023-07-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Discovery of IACS-52825, a Potent and Selective DLK Inhibitor for Treatment of Chemotherapy-Induced Peripheral Neuropathy.
J.Med.Chem., 66, 2023
4PIH
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BU of 4pih by Molmil
X-ray crystal structure of the K33S mutant of ubiquitin
Descriptor: CALCIUM ION, CHLORIDE ION, Ubiquitin
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
4PIJ
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BU of 4pij by Molmil
X-ray crystal structure of the K11S/K63S double mutant of ubiquitin
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
7ZAK
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BU of 7zak by Molmil
Crystal structure of HLA-DP (DPA1*02:01-DPB1*01:01) in complex with a peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, MAGNESIUM ION, ...
Authors:Racle, J, Guillaume, P, Larabi, A, Lau, K, Pojer, F, Gfeller, D.
Deposit date:2022-03-22
Release date:2023-03-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes.
Immunity, 56, 2023
7ZFR
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BU of 7zfr by Molmil
Crystal structure of HLA-DP (DPA1*02:01-DPB1*01:01) in complex with a peptide bound in the reverse direction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class II HLA-DP alpha chain (DPA1*02:01), MHC class II HLA-DP beta chain (DPB1*01:01), ...
Authors:Racle, J, Guillaume, P, Larabi, A, Lau, K, Pojer, F, Gfeller, D.
Deposit date:2022-04-01
Release date:2023-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes.
Immunity, 56, 2023
4PIG
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BU of 4pig by Molmil
Crystal structure of the ubiquitin K11S mutant
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
3CBG
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BU of 3cbg by Molmil
Functional and Structural Characterization of a Cationdependent O-Methyltransferase from the Cyanobacterium Synechocystis Sp. Strain PCC 6803
Descriptor: (2E)-3-(3-hydroxy-4-methoxyphenyl)prop-2-enoic acid, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, MAGNESIUM ION, ...
Authors:Kopycki, J.G, Neumann, P, Stubbs, M.T.
Deposit date:2008-02-22
Release date:2008-06-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and Structural Characterization of a Cation-dependent O-Methyltransferase from the Cyanobacterium Synechocystis sp. Strain PCC 6803
J.Biol.Chem., 283, 2008
1PWP
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BU of 1pwp by Molmil
Crystal Structure of the Anthrax Lethal Factor complexed with Small Molecule Inhibitor NSC 12155
Descriptor: Lethal factor, N,N'-BIS(4-AMINO-2-METHYLQUINOLIN-6-YL)UREA, ZINC ION
Authors:Wong, T.Y, Schwarzenbacher, R, Liddington, R.C.
Deposit date:2003-07-02
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of small molecule inhibitors of anthrax lethal factor.
Nat.Struct.Mol.Biol., 11, 2004
9HAF
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BU of 9haf by Molmil
Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Descriptor: DerF7_binder2, Mite allergen Der f 7
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAC
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BU of 9hac by Molmil
De novo designed BBF-14 beta barrel with computationally designed BBF-14_b4 binder
Descriptor: BBF-14, BBF-14_binder4, CHLORIDE ION, ...
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAE
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BU of 9hae by Molmil
Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Descriptor: DerF7_binder2, Mite allergen Der f 7, SODIUM ION
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAD
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BU of 9had by Molmil
Der f 21 dust mite allergen with computationally designed DerF21_b10 binder
Descriptor: DerF21_binder10, Mite allergen Der f 21.0101
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9GNZ
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BU of 9gnz by Molmil
Salmonella cap-filament complex
Descriptor: Flagellar hook-associated protein 2, Flagellin
Authors:Qin, K, Einenkel, R, Erhardt, M, Bergeron, J.R.C.
Deposit date:2024-09-04
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the complete extracellular bacterial flagellum reveals mechanism for flagellin incorporation
To Be Published

 

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