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2FSD
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BU of 2fsd by Molmil
A Common Fold for the Receptor Binding Domains of Lactococcal Phages? The Crystal Structure of the Head Domain of Phage bIL170
分子名称: putative baseplate protein
著者Ricagno, S, Cambillau, C.
登録日2006-01-22
公開日2006-09-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the Receptor-Binding Protein Head Domain from Lactococcus lactis Phage bIL170
J.Virol., 80, 2006
1P5R
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BU of 1p5r by Molmil
Formyl-CoA Transferase in complex with Coenzyme A
分子名称: COENZYME A, Formyl-coenzyme A transferase
著者Ricagno, S, Jonsson, S, Richards, N, Lindqvist, Y.
登録日2003-04-28
公開日2003-07-29
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Formyl-CoA Transferase encloses the CoA binding site at the interface of an interlocked dimer
Embo J., 22, 2003
1P5H
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BU of 1p5h by Molmil
Crystal structure of Formyl-CoA Transferase (apoenzyme) from Oxalobacter formigenes
分子名称: Formyl-coenzyme A transferase
著者Ricagno, S, Jonsson, S, Richards, N, Lindqvist, Y.
登録日2003-04-27
公開日2003-07-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Formyl-CoA Transferase encloses the CoA binding site at the interface of an interlocked dimer
Embo J., 22, 2003
1R0K
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BU of 1r0k by Molmil
Crystal structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Zymomonas mobilis
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, ACETATE ION
著者Ricagno, S, Grolle, S, Bringer-Meyer, S, Sahm, H, Lindqvist, Y, Schneider, G.
登録日2003-09-22
公開日2004-07-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from Zymomonas mobilis at 1.9-A resolution.
Biochim.Biophys.Acta, 1698, 2004
1R0L
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BU of 1r0l by Molmil
1-deoxy-D-xylulose 5-phosphate reductoisomerase from zymomonas mobilis in complex with NADPH
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ricagno, S, Grolle, S, Bringer-Meyer, S, Sahm, H, Lindqvist, Y, Schneider, G.
登録日2003-09-22
公開日2004-07-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from Zymomonas mobilis at 1.9-A resolution.
Biochim.Biophys.Acta, 1698, 2004
2H85
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BU of 2h85 by Molmil
Crystal Structure of Nsp 15 from SARS
分子名称: Putative orf1ab polyprotein
著者Ricagno, S, Egloff, M.P, Ulferts, R, Coutard, B, Nurizzo, D, Campanacci, V, Cambillau, C, Ziebuhr, J, Canard, B.
登録日2006-06-06
公開日2006-08-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure and mechanistic determinants of SARS coronavirus nonstructural protein 15 define an endoribonuclease family.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2V2K
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BU of 2v2k by Molmil
THE CRYSTAL STRUCTURE OF FDXA, A 7FE FERREDOXIN FROM MYCOBACTERIUM SMEGMATIS
分子名称: ACETATE ION, FE3-S4 CLUSTER, FERREDOXIN
著者Ricagno, S, de Rosa, M, Aliverti, A, Zanetti, G, Bolognesi, M.
登録日2007-06-06
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 360, 2007
3DHJ
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BU of 3dhj by Molmil
Beta 2 microglobulin mutant W60C
分子名称: Beta-2-microglobulin
著者Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
登録日2008-06-18
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
3DHM
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BU of 3dhm by Molmil
Beta 2 microglobulin mutant D59P
分子名称: Beta-2-microglobulin
著者Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
登録日2008-06-18
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
3EKC
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BU of 3ekc by Molmil
structure of W60V beta-2 microglobulin mutant
分子名称: Beta-2-microglobulin
著者Ricagno, S, Sangiovanni, E, Bellotti, V, Bolognesi, M.
登録日2008-09-19
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Human beta-2 microglobulin W60V mutant structure: Implications for stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 380, 2009
3F02
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BU of 3f02 by Molmil
Cleaved human neuroserpin
分子名称: Neuroserpin
著者Ricagno, S, Sorrentino, G, Caccia, S, Bolognesi, M.
登録日2008-10-24
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Human neuroserpin: structure and time-dependent inhibition
J.Mol.Biol., 388, 2009
3F5N
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BU of 3f5n by Molmil
Structure of native human neuroserpin
分子名称: Neuroserpin
著者Ricagno, S, Caccia, S, Sorrentino, G, Bolognesi, M.
登録日2008-11-04
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Human neuroserpin: structure and time-dependent inhibition
J.Mol.Biol., 388, 2009
4FXL
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BU of 4fxl by Molmil
Crystal structure of the D76N Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Ricagno, S, Bellotti, V, Pepys, M.B, Stoppini, M, Bolognesi, M.
登録日2012-07-03
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Hereditary systemic amyloidosis due to Asp76Asn variant beta-2-microglobulin.
N.Engl.J.Med., 366, 2012
6TCC
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BU of 6tcc by Molmil
Crystal structure of Salmo salar RidA-1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ricagno, S, Visentin, C, Di Pisa, F, Digiovanni, S, Oberti, L, Degani, G, Popolo, L, Bartorelli, A.
登録日2019-11-05
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Two novel fish paralogs provide insights into the Rid family of imine deaminases active in pre-empting enamine/imine metabolic damage.
Sci Rep, 10, 2020
6TCD
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BU of 6tcd by Molmil
Crystal structure of Salmo salar RidA-2
分子名称: ACETATE ION, Ribonuclease UK114, SULFATE ION
著者Ricagno, S, Visentin, C, Di Pisa, F, Digiovanni, S, Oberti, L, Degani, G, Popolo, L, Bartorelli, A.
登録日2019-11-05
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Two novel fish paralogs provide insights into the Rid family of imine deaminases active in pre-empting enamine/imine metabolic damage.
Sci Rep, 10, 2020
3QDA
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BU of 3qda by Molmil
Crystal structure of W95L beta-2 microglobulin
分子名称: Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者Ricagno, S, Bellotti, V, Bolognesi, M.
登録日2011-01-18
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献The two tryptophans of beta2-microglobulin have distinct roles in function and folding and might represent two independent responses to evolutionary pressure.
BMC Evol Biol, 11, 2011
1T4C
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BU of 1t4c by Molmil
Formyl-CoA Transferase in complex with Oxalyl-CoA
分子名称: COENZYME A, Formyl-CoA:oxalate CoA-transferase, OXALIC ACID
著者Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
登録日2004-04-29
公開日2004-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1T3Z
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BU of 1t3z by Molmil
Formyl-CoA Tranferase mutant Asp169 to Ser
分子名称: Formyl-coenzyme A transferase, OXIDIZED COENZYME A
著者Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
登録日2004-04-28
公開日2004-08-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1VGR
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BU of 1vgr by Molmil
Formyl-CoA transferase mutant Asp169 to Glu
分子名称: COENZYME A, Formyl-coenzyme A transferase
著者Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
登録日2004-04-28
公開日2004-08-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1VGQ
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BU of 1vgq by Molmil
Formyl-CoA transferase mutant Asp169 to Ala
分子名称: Formyl-coenzyme A transferase, OXIDIZED COENZYME A
著者Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
登録日2004-04-28
公開日2004-08-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
2Z9T
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BU of 2z9t by Molmil
Crystal structure of the human beta-2 microglobulin mutant W60G
分子名称: Beta-2-microglobulin
著者Ricagno, S, Bolognesi, M, Bellotti, V, Corazza, A, Rennella, E, Gural, D, Mimmi, M.C, Betto, E, Pucillo, C, Fogolari, F, Viglino, P, Raimondi, S, Giorgetti, S, Bolognesi, B, Merlini, G, Stoppini, M.
登録日2007-09-26
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties
J.Mol.Biol., 378, 2008
8CPE
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BU of 8cpe by Molmil
CryoEM structure of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient.
分子名称: Immunoglobulin lambda light chain
著者Puri, S, Schulte, T, Chaves-Sanjuan, A, Ricagno, S.
登録日2023-03-02
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献The Cryo-EM STRUCTURE of Renal Amyloid Fibril Suggests Structurally Homogeneous Multiorgan Aggregation in AL Amyloidosis.
J.Mol.Biol., 435, 2023
8P88
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BU of 8p88 by Molmil
X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody C4
分子名称: CHLORIDE ION, Light Chain H3, Nanobody C4, ...
著者Broggini, L, Ricagno, S.
登録日2023-05-31
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.022 Å)
主引用文献Nanobodies counteract the toxicity of an amyloidogenic light chain by stabilizing a partially open dimeric conformation.
J.Mol.Biol., 435, 2023
8P89
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BU of 8p89 by Molmil
X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody B5
分子名称: CHLORIDE ION, Light chain H3, Nanobody B5
著者Broggini, L, Ricagno, S.
登録日2023-05-31
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.187 Å)
主引用文献Nanobodies counteract the toxicity of an amyloidogenic light chain by stabilizing a partially open dimeric conformation.
J.Mol.Biol., 435, 2023
6Z3X
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BU of 6z3x by Molmil
Crystal structure of the designed antibody DesAb-anti-HSA-P1
分子名称: CACODYLATE ION, DesAb-anti-HSA-P1, IMIDAZOLE, ...
著者Costanzi, E, Sormanni, P, Ricagno, S.
登録日2020-05-22
公開日2021-03-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Fragment-based computational design of antibodies targeting structured epitopes.
Sci Adv, 8, 2022

 

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