Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7LTN
DownloadVisualize
BU of 7ltn by Molmil
Crystal structure of Mpro in complex with inhibitor CDD-1713
Descriptor: 2-[4-(1~{H}-indazol-4-yl)-2-methanoyl-6-methoxy-phenoxy]-~{N},~{N}-dimethyl-ethanamide, 3C-like proteinase
Authors:Lu, S, Palzkill, T, Matzuk, M, Young, D, Melek, N, Chamakuri, S.
Deposit date:2021-02-19
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:DNA-encoded chemistry technology yields expedient access to SARS-CoV-2 M pro inhibitors.
Proc.Natl.Acad.Sci.USA, 118, 2021
4IVO
DownloadVisualize
BU of 4ivo by Molmil
Structure of human protoporphyrinogen IX oxidase(R59Q)
Descriptor: 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Xiaohong, Q, Baifan, W.
Deposit date:2013-01-23
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:Quantitative structural insight into human variegate porphyria disease.
J.Biol.Chem., 288, 2013
4IVM
DownloadVisualize
BU of 4ivm by Molmil
Structure of human protoporphyrinogen IX oxidase(R59G)
Descriptor: 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Xiaohong, Q, Baifan, W.
Deposit date:2013-01-23
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.769 Å)
Cite:Quantitative structural insight into human variegate porphyria disease.
J.Biol.Chem., 288, 2013
7BEF
DownloadVisualize
BU of 7bef by Molmil
Structures of class II bacterial transcription complexes
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Hao, M, Ye, F.Z, Zhang, X.D.
Deposit date:2020-12-23
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures of Class I and Class II Transcription Complexes Reveal the Molecular Basis of RamA-Dependent Transcription Activation.
Adv Sci, 9, 2022
7BEG
DownloadVisualize
BU of 7beg by Molmil
Structures of class I bacterial transcription complexes
Descriptor: Class I pacrA promoter non-template DNA, Class I pacrA promoter template DNA, DNA-directed RNA polymerase subunit alpha, ...
Authors:Ye, F.Z, Hao, M, Zhang, X.D.
Deposit date:2020-12-23
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of Class I and Class II Transcription Complexes Reveal the Molecular Basis of RamA-Dependent Transcription Activation.
Adv Sci, 9, 2022
5GS4
DownloadVisualize
BU of 5gs4 by Molmil
Crystal structure of estrogen receptor alpha in complex with a stabilized peptide antagonist
Descriptor: ARG-IAS-ILE-LEU-DNP-ARG-LEU-LEU-GLN, ESTRADIOL, Estrogen receptor, ...
Authors:Xie, M, Wang, T, Li, Z.-G.
Deposit date:2016-08-13
Release date:2017-08-30
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of Inhibition of ER alpha-Coactivator Interaction by High-Affinity N-Terminus Isoaspartic Acid Tethered Helical Peptides
J. Med. Chem., 60, 2017
5GTR
DownloadVisualize
BU of 5gtr by Molmil
estrogen receptor alpha in complex with a stabilized peptide antagonist 6
Descriptor: ARG-IAS-ILE-0JY-DPP-ARG-0JY-0JY-GLN-NH2, ESTRADIOL, Estrogen receptor
Authors:Xie, M, Wang, T, Li, Z.-G.
Deposit date:2016-08-23
Release date:2017-08-30
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural Basis of Inhibition of ER alpha-Coactivator Interaction by High-Affinity N-Terminus Isoaspartic Acid Tethered Helical Peptides
J. Med. Chem., 60, 2017
7XIV
DownloadVisualize
BU of 7xiv by Molmil
Structural insight into the interactions between Lloviu virus VP30 and nucleoprotein
Descriptor: Nucleocapsid protein,Minor nucleoprotein VP30
Authors:Dong, S.S, Qin, X.C, Sun, W.Y, Luan, F.C, Wang, J.J, Ma, L, Li, X.X, Yang, G.X, Hao, C.Y.
Deposit date:2022-04-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structural insights into the interactions between lloviu virus VP30 and nucleoprotein.
Biochem.Biophys.Res.Commun., 616, 2022
4KSO
DownloadVisualize
BU of 4kso by Molmil
Crystal Structure of Circadian clock protein KaiB from S.Elongatus
Descriptor: Circadian clock protein KaiB
Authors:Pattanayek, R, Egli, M.
Deposit date:2013-05-17
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.622 Å)
Cite:CryoEM and Molecular Dynamics of the Circadian KaiB-KaiC Complex Indicates KaiB Monomers Interact with KaiC and Block ATP Binding Clefts.
J.Mol.Biol., 425, 2013
5ZGH
DownloadVisualize
BU of 5zgh by Molmil
Cryo-EM structure of the red algal PSI-LHCR
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Pi, X.
Deposit date:2018-03-09
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ZGB
DownloadVisualize
BU of 5zgb by Molmil
Cryo-EM structure of the red algal PSI-LHCR
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Pi, X.
Deposit date:2018-03-08
Release date:2018-04-25
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6A2W
DownloadVisualize
BU of 6a2w by Molmil
Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Wang, W, Yu, L.J, Kuang, T.Y, Shen, J.R.
Deposit date:2018-06-13
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for blue-green light harvesting and energy dissipation in diatoms.
Science, 363, 2019
8HKG
DownloadVisualize
BU of 8hkg by Molmil
Crystal structure of glycosidic hydrolase family 10 (GH10) xylanase XynA contains an additional proline-rich sequence in the C-terminus
Descriptor: xylanase
Authors:Dong, R.Y, Tu, T.
Deposit date:2022-11-26
Release date:2023-02-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Effectiveness of ruminal xylanase with an extra proline-rich C-terminus on lignocellulosic biomass degradation.
Bioresour Technol, 372, 2023
7YJI
DownloadVisualize
BU of 7yji by Molmil
Crystal structure of Lpg1083 from Legionella pneumophila
Descriptor: ACETATE ION, T4SS effector Lpg1083
Authors:Ge, H, Gao, J, Chen, X.
Deposit date:2022-07-20
Release date:2023-06-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The bacterial effector SidN/Lpg1083 promotes cell death by targeting Lamin-B2.
J Mol Cell Biol, 15, 2023
8HGT
DownloadVisualize
BU of 8hgt by Molmil
Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei
Descriptor: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jiang, Y, Tian, X, Cong, Z.
Deposit date:2022-11-15
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Enabling Peroxygenase Activity in Cytochrome P450 Monooxygenases by Engineering Hydrogen Peroxide Tunnels.
J.Am.Chem.Soc., 145, 2023
7WVR
DownloadVisualize
BU of 7wvr by Molmil
Crystal structure of Talaromyces leycettanus JCM12802 expansin
Descriptor: EXLX1
Authors:Ding, S.J, Luo, H.Y, Yao, B, Tu, T.
Deposit date:2022-02-11
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Boosting enzymatic degradation of cellulose using a fungal expansin: Structural insight into the pretreatment mechanism
Bioresour Technol, 358, 2022
7WDH
DownloadVisualize
BU of 7wdh by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-phenylalanine, phenol and hydroxylamine
Descriptor: (2S)-2-(6-imidazol-1-ylhexanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2021-12-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Engineering Cytochrome P450BM3 Enzymes for Direct Nitration of Unsaturated Hydrocarbons.
Angew.Chem.Int.Ed.Engl., 62, 2023
7WDG
DownloadVisualize
BU of 7wdg by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87L in complex with N-imidazolyl-hexanoyl-L-phenylalanine, phenol and hydroxylamine
Descriptor: (2S)-2-(6-imidazol-1-ylhexanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2021-12-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Engineering Cytochrome P450BM3 Enzymes for Direct Nitration of Unsaturated Hydrocarbons.
Angew.Chem.Int.Ed.Engl., 62, 2023
8HGC
DownloadVisualize
BU of 8hgc by Molmil
Crystal structure of the CYP199A4 mutant F182T in complex with 4-methoxybenzoic acid
Descriptor: 4-METHOXYBENZOIC ACID, ACETATE ION, Cytochrome P450, ...
Authors:Jiang, Y, Cong, Z.
Deposit date:2022-11-14
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Enabling Peroxygenase Activity in Cytochrome P450 Monooxygenases by Engineering Hydrogen Peroxide Tunnels.
J.Am.Chem.Soc., 145, 2023
8HLV
DownloadVisualize
BU of 8hlv by Molmil
Bry-LHCII homotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-01
Release date:2023-09-06
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8HPD
DownloadVisualize
BU of 8hpd by Molmil
Bry-LHCII heterotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-12
Release date:2023-09-06
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8HQ8
DownloadVisualize
BU of 8hq8 by Molmil
Bry-LHCII homotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-13
Release date:2023-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
7VZR
DownloadVisualize
BU of 7vzr by Molmil
Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the smaller form)
Descriptor: BACTERIOCHLOROPHYLL A, CALCIUM ION, CHLOROPHYLL A, ...
Authors:Huang, G.Q, Dong, S.S, Qin, X.C, Sui, S.F.
Deposit date:2021-11-16
Release date:2022-12-28
Method:ELECTRON MICROSCOPY (2.22 Å)
Cite:Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c
Nat Commun, 13, 2022
7VZG
DownloadVisualize
BU of 7vzg by Molmil
Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the larger form)
Descriptor: BACTERIOCHLOROPHYLL A, CALCIUM ION, CHLOROPHYLL A, ...
Authors:Huang, G.Q, Dong, S.S, Qin, X.C, Sui, S.F.
Deposit date:2021-11-16
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c.
Nat Commun, 13, 2022
7DKZ
DownloadVisualize
BU of 7dkz by Molmil
Structure of plant photosystem I-light harvesting complex I supercomplex
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Wang, J, Yu, L.J, Wang, W.
Deposit date:2020-11-25
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structure of plant photosystem I-light harvesting complex I supercomplex at 2.4 angstrom resolution.
J Integr Plant Biol, 63, 2021

219869

數據於2024-05-15公開中

PDB statisticsPDBj update infoContact PDBjnumon