Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1B7D
DownloadVisualize
BU of 1b7d by Molmil
NEUROTOXIN (TS1) FROM BRAZILIAN SCORPION TITYUS SERRULATUS
Descriptor: PHOSPHATE ION, PROTEIN (NEUROTOXIN TS1)
Authors:Polikarpov, I, Sanches Jr, M.S, Marangoni, S, Toyama, M.H, Teplyakov, A.
Deposit date:1999-01-21
Release date:1999-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of neurotoxin Ts1 from Tityus serrulatus provides insights into the specificity and toxicity of scorpion toxins.
J.Mol.Biol., 290, 1999
1XC6
DownloadVisualize
BU of 1xc6 by Molmil
Native Structure Of Beta-Galactosidase from Penicillium sp. in complex with Galactose
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rojas, A.L, Nagem, R.A.P, Neustroev, K.N, Arand, M, Adamska, M, Eneyskaya, E.V, Kulminskaya, A.A, Garratt, R.C, Golubev, A.M, Polikarpov, I.
Deposit date:2004-09-01
Release date:2004-11-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of beta-Galactosidase from Penicillium sp. and its Complex with Galactose
J.Mol.Biol., 343, 2004
8GF3
DownloadVisualize
BU of 8gf3 by Molmil
Crystallographic structure from BlMan5_7
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Briganti, L, Araujo, E.A, Polikarpov, I.
Deposit date:2023-03-07
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic structure from BlMan5_7
To be published
2RC5
DownloadVisualize
BU of 2rc5 by Molmil
Refined structure of FNR from Leptospira interrogans
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin-NADP reductase, SULFATE ION, ...
Authors:Nascimento, A.S, Catalano-Dupuy, D.L, Polikarpov, I, Ceccarelli, E.A.
Deposit date:2007-09-19
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:Crystal structures of Leptospira interrogans FAD-containing ferredoxin-NADP+ reductase and its complex with NADP+.
Bmc Struct.Biol., 7, 2007
2RC6
DownloadVisualize
BU of 2rc6 by Molmil
Refined structure of FNR from Leptospira interrogans bound to NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin-NADP reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Nascimento, A.S, Catalano-Dupuy, D.L, Ceccarelli, E.A, Polikarpov, I.
Deposit date:2007-09-19
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of Leptospira interrogans FAD-containing ferredoxin-NADP+ reductase and its complex with NADP+.
Bmc Struct.Biol., 7, 2007
3CFN
DownloadVisualize
BU of 3cfn by Molmil
Crystal structure of human transthyretin in complex with 1-anilino-8-naphthalene sulfonate
Descriptor: 8-ANILINO-1-NAPHTHALENE SULFONATE, Transthyretin
Authors:Lima, L.-M.T.R, Foguel, D, Polikarpov, I.
Deposit date:2008-03-04
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Identification of a novel ligand binding motif in the transthyretin channel.
Bioorg.Med.Chem., 18, 2010
3CFT
DownloadVisualize
BU of 3cft by Molmil
Crystal structure of human transthyretin in complex with 1-amino-5-naphthalene sulfonate
Descriptor: 5-aminonaphthalene-1-sulfonic acid, Transthyretin
Authors:Lima, L.-M.T.R, Foguel, D, Polikarpov, I.
Deposit date:2008-03-04
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Identification of a novel ligand binding motif in the transthyretin channel.
Bioorg.Med.Chem., 18, 2010
3CFM
DownloadVisualize
BU of 3cfm by Molmil
Crystal structure of the apo form of human wild-type transthyretin
Descriptor: Transthyretin
Authors:Lima, L.-M.T.R, Foguel, D, Polikarpov, I.
Deposit date:2008-03-04
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of a novel ligand binding motif in the transthyretin channel.
Bioorg.Med.Chem., 18, 2010
4UZS
DownloadVisualize
BU of 4uzs by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase
Descriptor: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
Deposit date:2014-09-08
Release date:2015-09-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpah-Galactose.
FEBS J., 283, 2016
6O9N
DownloadVisualize
BU of 6o9n by Molmil
Structural insights on a new fungal aryl-alcohol oxidase
Descriptor: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2019-03-14
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Enzymatic versatility and thermostability of a new aryl-alcohol oxidase from Thermothelomyces thermophilus M77.
Biochim Biophys Acta Gen Subj, 1864, 2020
6WGD
DownloadVisualize
BU of 6wgd by Molmil
Crystal structure of a 6-phospho-beta-glucosidase from Bacillus licheniformis
Descriptor: 1,2-ETHANEDIOL, 6-phospho-beta-glucosidase
Authors:Liberato, M.V, Popov, A, Polikarpov, I.
Deposit date:2020-04-05
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray Structure, Bioinformatics Analysis, and Substrate Specificity of a 6-Phospho-beta-glucosidase Glycoside Hydrolase 1 Enzyme from Bacillus licheniformis .
J.Chem.Inf.Model., 60, 2020
4UOJ
DownloadVisualize
BU of 4uoj by Molmil
Structure of Fungal beta-mannosidase (GH2) from Trichoderma harzianum
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(3-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Muniz, J.R.C, Aparicio, R, Santos, J.C, Nascimento, A.S, Golubev, A.M, Polikarpov, I.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into the Structure and Function of Fungal Beta-Mannosidases from Glycoside Hydrolase Family 2 Based on Multiple Crystal Structures of the Trichoderma Harzianum Enzyme.
FEBS J., 281, 2014
4USC
DownloadVisualize
BU of 4usc by Molmil
Crystal structure of peroxidase from palm tree Chamaerops excelsa
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Bernardes, A, Santos, J.C, Textor, L.C, Cuadrado, N.H, Kostetsky, E.Y, Roig, M.G, Muniz, J.R.C, Shnyrov, V.L, Polikarpov, I.
Deposit date:2014-07-07
Release date:2015-05-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure Analysis of Peroxidase from the Palm Tree Chamaerops Excelsa.
Biochimie, 111, 2015
8FAA
DownloadVisualize
BU of 8faa by Molmil
Crystal structure of Xanthomonas campestris GH35 beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Godoy, A.S, Polikarpov, I.
Deposit date:2022-11-25
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Xanthomonas campestris GanA beta-galactosidase
To Be Published
5FLW
DownloadVisualize
BU of 5flw by Molmil
Crystal structure of putative exo-beta-1,3-galactanase from Bifidobacterium bifidum s17
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EXO-BETA-1,3-GALACTANASE
Authors:Godoy, A.S, de Lima, M.Z.T, Ramia, M.P, Camilo, C.M, Muniz, J.R.C, Polikarpov, I.
Deposit date:2015-10-28
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Crystal structure of a putative exo-beta-1,3-galactanase from Bifidobacterium bifidum S17.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5DYR
DownloadVisualize
BU of 5dyr by Molmil
Structure of virulence-associated protein D (VapD) from Xylella fastidiosa
Descriptor: Virulence-associated protein D
Authors:Kochneva, M.V, dos Santos, M.L, dos Santos, C.A, de Souza, A.P, Polikarpov, I, Aparicio, R, Golubev, A.M.
Deposit date:2015-09-25
Release date:2016-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of virulence-associated protein D (VapD) from Xylella fastidiosa
To Be Published
4TUF
DownloadVisualize
BU of 4tuf by Molmil
Catalytic domain of the major endoglucanase from Xanthomonas campestris pv. campestris
Descriptor: DIHYDROGENPHOSPHATE ION, Major extracellular endoglucanase
Authors:Puhl, A.C, Rosseto, F.R, Polikarpov, I.
Deposit date:2014-06-24
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Substrate cleavage pattern, biophysical characterization and crystallographic structure of the major endoglucanase from Xanthomonas campestris pv. campestris
To Be Published
4BCR
DownloadVisualize
BU of 4bcr by Molmil
Structure of PPARalpha in complex with WY14643
Descriptor: 1,2-ETHANEDIOL, 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR ALPHA
Authors:Bernardes, A, Muniz, J.R.C, Polikarpov, I.
Deposit date:2012-10-02
Release date:2013-05-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Molecular Mechanism of Peroxisome Proliferator-Activated Receptor Alpha Activation by Wy14643: A New Mode of Ligand Recognition and Receptor Stabilization
J.Mol.Biol., 425, 2013
6MVI
DownloadVisualize
BU of 6mvi by Molmil
Apo Cel45A from Neurospora crassa OR74A
Descriptor: Endoglucanase V
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2018-10-25
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A.
Biochimie, 165, 2019
6BUS
DownloadVisualize
BU of 6bus by Molmil
Extended E2 DNA-binding domain of the Bovine Papillomavirus-1
Descriptor: Regulatory protein E2
Authors:Leroy, L.M.D, Barbosa, J.A.R.G, Polikarpov, I, Pinheiro, C.B.
Deposit date:2017-12-11
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of the extended E2 DNA-binding domain of the bovine papillomavirus-1.
Proteins, 88, 2020
6MVJ
DownloadVisualize
BU of 6mvj by Molmil
Cellobiose complex Cel45A from Neurospora crassa OR74A
Descriptor: Endoglucanase V, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2018-10-25
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.809 Å)
Cite:Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A.
Biochimie, 165, 2019
8FA4
DownloadVisualize
BU of 8fa4 by Molmil
Crystal structure of Xanthomonas campestris GanA beta-galactosidase
Descriptor: Glycoside hydrolase
Authors:Godoy, A.S, Polikarpov, I.
Deposit date:2022-11-25
Release date:2023-11-29
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structure of Xanthomonas campestris GanA beta-galactosidase
To Be Published
8FA5
DownloadVisualize
BU of 8fa5 by Molmil
Crystal structure of Xanthomonas campestris GH35 beta-galactosidase
Descriptor: 1,2-ETHANEDIOL, Beta-galactosidase
Authors:Godoy, A.S, Polikarpov, I.
Deposit date:2022-11-25
Release date:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Xanthomonas campestris GanA beta-galactosidase
To Be Published
1Y9G
DownloadVisualize
BU of 1y9g by Molmil
Crystal structure of exo-inulinase from Aspergillus awamori complexed with fructose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-fructofuranose, ...
Authors:Nagem, R.A.P, Rojas, A.L, Golubev, A.M, Korneeva, O.S, Eneyskaya, E.V, Kulminskaya, A.A, Neustroev, K.N, Polikarpov, I.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of exo-inulinase from Aspergillus awamori: the enzyme fold and structural determinants of substrate recognition
J.Mol.Biol., 344, 2004
1Y4W
DownloadVisualize
BU of 1y4w by Molmil
Crystal structure of exo-inulinase from Aspergillus awamori in spacegroup P21
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Nagem, R.A.P, Rojas, A.L, Golubev, A.M, Korneeva, O.S, Eneyskaya, E.V, Kulminskaya, A.A, Neustroev, K.N, Polikarpov, I.
Deposit date:2004-12-01
Release date:2004-12-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of exo-inulinase from Aspergillus awamori: the enzyme fold and structural determinants of substrate recognition
J.Mol.Biol., 344, 2004

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon