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3UNA
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BU of 3una by Molmil
Crystal Structure of Bovine Milk Xanthine Dehydrogenase with NAD Bound
分子名称: 2-HYDROXYBENZOIC ACID, CALCIUM ION, CARBONATE ION, ...
著者Eger, B.T, Okamoto, K, Nishino, T, Pai, E.F.
登録日2011-11-15
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Protein conformational gating of enzymatic activity in xanthine oxidoreductase.
J.Am.Chem.Soc., 134, 2012
3W07
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BU of 3w07 by Molmil
Atomic resolution structure of orotidine 5'-monophosphate decarboxylase from Methanothermobacter thermoautotrophicus bound with UMP.
分子名称: GLYCEROL, Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2012-10-22
公開日2013-02-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Atomic resolution structure of the orotidine 5'-monophosphate decarboxylase product complex combined with surface plasmon resonance analysis: implications for the catalytic mechanism.
J.Biol.Chem., 288, 2013
3VGC
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BU of 3vgc by Molmil
GAMMA-CHYMOTRYPSIN L-NAPHTHYL-1-ACETAMIDO BORONIC ACID ACID INHIBITOR COMPLEX
分子名称: GAMMA CHYMOTRYPSIN, L-1-NAPHTHYL-2-ACETAMIDO-ETHANE BORONIC ACID, SULFATE ION
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-05-01
公開日1997-11-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
3VSB
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BU of 3vsb by Molmil
SUBTILISIN CARLSBERG D-NAPHTHYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: SODIUM ION, SUBTILISIN CARLSBERG, TYPE VIII
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-09-25
公開日1998-03-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
3WK3
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BU of 3wk3 by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
分子名称: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK0
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BU of 3wk0 by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
分子名称: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJX
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BU of 3wjx by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Kuroda, S, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJW
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BU of 3wjw by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-methyl-UMP
分子名称: 6-methyluridine 5'-(dihydrogen phosphate), Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Kuroda, S, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJY
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BU of 3wjy by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK1
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BU of 3wk1 by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
分子名称: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJZ
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BU of 3wjz by Molmil
Orotidine 5'-monophosphate decarboxylase D75N mutant from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
1HYB
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BU of 1hyb by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE SITE MUTANT OF METHANOBACTERIUM THERMOAUTOTROPHICUM NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, SULFATE ION
著者Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F.
登録日2001-01-18
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
3WK2
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BU of 3wk2 by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
分子名称: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
1J70
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BU of 1j70 by Molmil
CRYSTAL STRUCTURE OF YEAST ATP SULFURYLASE
分子名称: ATP SULPHURYLASE, PHOSPHATE ION, SODIUM ION
著者Lalor, D.J, Schnyder, T, Saridakis, V, Pilloff, D.E, Dong, A, Tang, H, Leyh, T.S, Pai, E.F.
登録日2001-05-15
公開日2003-06-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional analysis of a truncated form of Saccharomyces cerevisiae ATP sulfurylase: C-terminal domain essential for oligomer formation but not for activity.
Protein Eng., 16, 2003
3D0L
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BU of 3d0l by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671
分子名称: 2F5 heavy chain, 2F5 light chain, GLYCEROL, ...
著者Bryson, S, Julien, J.P, Pai, E.F.
登録日2008-05-01
公開日2008-10-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3D0V
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BU of 3d0v by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide LLELDKWASLW
分子名称: 2F5 Fab heavy chain, 2F5 Fab light chain, gp41 peptide LLELDKWASLW
著者Bryson, S, Julien, J.P, Pai, E.F.
登録日2008-05-02
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3CXN
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BU of 3cxn by Molmil
Structure of the Urease Accessory Protein UreF from Helicobacter pylori
分子名称: GLYCEROL, Urease accessory protein ureF
著者Lam, R, Johns, K, Romanov, V, Dong, A, Wu-Brown, J, Guthrie, J, Dharamsi, A, Thambipillai, D, Mansoury, K, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
登録日2008-04-24
公開日2009-05-12
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of a truncated urease accessory protein UreF from Helicobacter pylori.
Proteins, 78, 2010
3D7R
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BU of 3d7r by Molmil
Crystal structure of a putative esterase from Staphylococcus aureus
分子名称: BROMIDE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Lam, R, Battaile, K.P, Chan, T, Romanov, V, Lam, K, Soloveychik, M, Wu-Brown, J, Pai, E.F, Chirgadze, N.Y.
登録日2008-05-21
公開日2009-06-09
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of a putative esterase from Staphylococcus aureus
To be Published
3DRQ
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BU of 3drq by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671 soaked in PEG/2-propanol solution
分子名称: 2F5 Fab' heavy chain, 2F5 Fab' light chain, GLYCEROL, ...
著者Bryson, S, Julien, J.P, Pai, E.F.
登録日2008-07-11
公開日2008-10-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3DBP
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BU of 3dbp by Molmil
Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
著者Liu, Y, To, T, Bello, A.M, Kotra, L.P, Pai, E.F.
登録日2008-06-02
公開日2009-06-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP
To be Published
3DRT
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BU of 3drt by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 scrambledFP-MPER scrHyb3K construct GIGAFGLLGFLAAGSKK-Ahx-K656NEQELLELDKWASLWN671
分子名称: 2F5 Fab' heavy chain, 2F5 Fab' light chain, GLYCEROL, ...
著者Julien, J.-P, Bryson, S, de la Torre, B.G, Andreu, D, Nieva, J.L, Pai, E.F.
登録日2008-07-11
公開日2009-06-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural constraints imposed by the conserved fusion peptide on the HIV-1 gp41 epitope recognized by the broadly neutralizing antibody 2F5.
J.Phys.Chem.B, 113, 2009
3DRO
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BU of 3dro by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Antibody 2F5 in complex with gp41 Peptide ELLELDKWASLWN grown in ammonium sulfate
分子名称: 2F5 Fab heavy chain, 2F5 Fab light chain, ELLELDKWASLWN gp41 peptide
著者Julien, J.-P, Bryson, S, Pai, E.F.
登録日2008-07-11
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3EGS
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BU of 3egs by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 scrambledFP-MPER scrHyb3K construct GIGAFGLLGFLAAGSKK-Ahx-K656NEQELLELDKWASLWN671 soaked in ammonium sulfate
分子名称: 2F5 Fab' heavy chain, 2F5 Fab' light chain, gp41 scrFP-MPER construct
著者Julien, J.-P, Bryson, S, de la Torre, B.G, Andreu, D, Nieva, J.L, Pai, E.F.
登録日2008-09-11
公開日2009-08-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural constraints imposed by the conserved fusion peptide on the HIV-1 gp41 epitope recognized by the broadly neutralizing antibody 2F5.
J.Phys.Chem.B, 113, 2009
3E2I
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BU of 3e2i by Molmil
Crystal structure of Thymidine Kinase from S. aureus
分子名称: GLYCEROL, Thymidine kinase, ZINC ION
著者Lam, R, Johns, K, Battaile, K.P, Romanov, V, Lam, K, Pai, E.F, Chirgadze, N.Y.
登録日2008-08-05
公開日2009-08-11
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of Thymidine Kinase from S. aureus
To be Published
3EYO
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BU of 3eyo by Molmil
Crystal structure of anti-human cytomegalovirus antibody 8F9
分子名称: 8f9 Fab, AD-2
著者Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
登録日2008-10-21
公開日2008-12-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008

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