2ZNL
 
 | | Crystal structure of PA-PB1 complex form influenza virus RNA polymerase | | 分子名称: | Polymerase acidic protein, RNA-directed RNA polymerase catalytic subunit | | 著者 | Obayashi, E, Yoshida, H, Kawai, F, Shibayama, N, Kawaguchi, A, Nagata, K, Tame, J.R.H, Park, S.-Y. | | 登録日 | 2008-04-28 | | 公開日 | 2008-09-02 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | The structural basis for an essential subunit interaction in influenza virus RNA polymerase
Nature, 454, 2008
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5H7U
 | | NMR structure of eIF3 36-163 | | 分子名称: | Eukaryotic translation initiation factor 3 subunit C | | 著者 | Nagata, T, Obayashi, E. | | 登録日 | 2016-11-21 | | 公開日 | 2017-05-31 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.
Cell Rep, 18, 2017
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2RVH
 | | NMR structure of eIF1 | | 分子名称: | Eukaryotic translation initiation factor eIF-1 | | 著者 | Nagata, T, Obayashi, E, Asano, K. | | 登録日 | 2015-10-16 | | 公開日 | 2016-10-26 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5
Cell Rep, 18, 2017
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4YH8
 | | Structure of yeast U2AF complex | | 分子名称: | Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ZINC ION | | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | | 登録日 | 2015-02-27 | | 公開日 | 2015-08-12 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | A novel 3' splice site recognition by the two zinc fingers in the U2AF small subunit.
Genes Dev., 29, 2015
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5LSB
 | | Crystal structure of yeast Hsh49p in complex with Cus1p binding domain. | | 分子名称: | Cold sensitive U2 snRNA suppressor 1, Protein HSH49 | | 著者 | van Roon, A.M, Obayashi, E, Sposito, B, Oubridge, C, Nagai, K. | | 登録日 | 2016-08-24 | | 公開日 | 2017-04-12 | | 最終更新日 | 2024-01-17 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystal structure of U2 snRNP SF3b components: Hsh49p in complex with Cus1p-binding domain.
RNA, 23, 2017
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5LSL
 | | Crystal structure of yeast Hsh49p in complex with Cus1p binding domain. | | 分子名称: | Cold sensitive U2 snRNA suppressor 1, Protein HSH49 | | 著者 | van Roon, A.M, Obayashi, E, Sposito, B, Oubridge, C, Nagai, K. | | 登録日 | 2016-09-02 | | 公開日 | 2017-04-12 | | 最終更新日 | 2024-01-17 | | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | | 主引用文献 | Crystal structure of U2 snRNP SF3b components: Hsh49p in complex with Cus1p-binding domain.
RNA, 23, 2017
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7C06
 | | Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU. | | 分子名称: | RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | | 登録日 | 2020-04-30 | | 公開日 | 2020-09-30 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (3.02 Å) | | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1.
Nat Commun, 11, 2020
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7C08
 | | Crystal structure of S34Y mutant of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU. | | 分子名称: | RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | | 登録日 | 2020-04-30 | | 公開日 | 2020-09-30 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (3.35 Å) | | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1.
Nat Commun, 11, 2020
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7C07
 | | Crystal structure of yeast U2AF1 complex bound to 5'-AAGGU RNA. | | 分子名称: | RNA (5'-R(*U*AP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | | 登録日 | 2020-04-30 | | 公開日 | 2020-09-30 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1.
Nat Commun, 11, 2020
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7BV9
 | | The NMR structure of the BEN domain from human NAC1 | | 分子名称: | Nucleus accumbens-associated protein 1 | | 著者 | Nagata, T, Kobayashi, N, Nakayama, N, Obayashi, E, Urano, T. | | 登録日 | 2020-04-09 | | 公開日 | 2021-02-17 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Nucleus Accumbens-Associated Protein 1 Binds DNA Directly through the BEN Domain in a Sequence-Specific Manner.
Biomedicines, 8, 2020
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2ZTT
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3A1G
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1F24
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1F25
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1F26
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5H2B
 | | Structure of a novel antibody G196 | | 分子名称: | G196 antibody Heavy chain, G196 antibody Light chain | | 著者 | Park, S.Y, Sugiyama, K. | | 登録日 | 2016-10-14 | | 公開日 | 2017-03-22 | | 最終更新日 | 2020-02-26 | | 実験手法 | X-RAY DIFFRACTION (2.001 Å) | | 主引用文献 | G196 epitope tag system: a novel monoclonal antibody, G196, recognizes the small, soluble peptide DLVPR with high affinity.
Sci Rep, 7, 2017
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2K0A
 | | 1H, 15N and 13C chemical shift assignments for Rds3 protein | | 分子名称: | Pre-mRNA-splicing factor RDS3, ZINC ION | | 著者 | Loening, N, van Roon, A, Yang, J, Nagai, K, Neuhaus, D. | | 登録日 | 2008-01-31 | | 公開日 | 2008-07-22 | | 最終更新日 | 2022-03-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the U2 snRNP protein Rds3p reveals a knotted zinc-finger motif.
Proc.Natl.Acad.Sci.Usa, 105, 2008
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1ROM
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1JFB
 | | X-ray structure of nitric oxide reductase (cytochrome P450nor) in the ferric resting state at atomic resolution | | 分子名称: | GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, nitric-oxide reductase cytochrome P450 55A1 | | 著者 | Shimizu, H, Adachi, S, Park, S.Y, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2001-06-20 | | 公開日 | 2001-12-20 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1 Å) | | 主引用文献 | X-ray structure of nitric oxide reductase (cytochrome P450nor) at atomic resolution.
Acta Crystallogr.,Sect.D, 58, 2002
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1JFC
 | | X-ray structure of nitric oxide reductase (cytochrome P450nor) in the ferrous CO state at atomic resolution | | 分子名称: | CARBON MONOXIDE, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ... | | 著者 | Shimizu, H, Adachi, S, Park, S.Y, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2001-06-20 | | 公開日 | 2001-12-20 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | | 主引用文献 | X-ray structure of nitric oxide reductase (cytochrome P450nor) at atomic resolution.
Acta Crystallogr.,Sect.D, 58, 2002
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3VSK
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3VSL
 | | Crystal structure of penicillin-binding protein 3 (PBP3) from methicilin-resistant Staphylococcus aureus in the cefotaxime bound form. | | 分子名称: | CEFOTAXIME, C3' cleaved, open, ... | | 著者 | Yoshida, H, Tame, J.R, Park, S.Y. | | 登録日 | 2012-04-25 | | 公開日 | 2012-10-31 | | 最終更新日 | 2017-03-15 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal Structures of Penicillin-Binding Protein 3 (PBP3) from Methicillin-Resistant Staphylococcus aureus in the Apo and Cefotaxime-Bound Forms.
J.Mol.Biol., 423, 2012
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2ROM
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3A3J
 | | Crystal structures of penicillin binding protein 5 from Haemophilus influenzae | | 分子名称: | PBP5, SULFATE ION | | 著者 | Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H. | | 登録日 | 2009-06-12 | | 公開日 | 2009-12-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
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3A3D
 | | Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae | | 分子名称: | GLYCEROL, Penicillin-binding protein 4 | | 著者 | Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H. | | 登録日 | 2009-06-12 | | 公開日 | 2009-12-22 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
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