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4UFC
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BU of 4ufc by Molmil
Crystal structure of the GH95 enzyme BACOVA_03438
分子名称: CACODYLATE ION, CALCIUM ION, GH95, ...
著者Rogowski, A, Briggs, J.A, Mortimer, J.C, Tryfona, T, Terrapon, N, Lowe, E.C, Basle, A, Morland, C, Day, A.M, Zheng, H, Rogers, T.E, Thompson, P, Hawkins, A.R, Yadav, M.P, Henrissat, B, Martens, E.C, Dupree, P, Gilbert, H.J, Bolam, D.N.
登録日2015-03-16
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Glycan Complexity Dictates Microbial Resource Allocation in the Large Intestine.
Nat.Commun., 6, 2015
4UTF
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BU of 4utf by Molmil
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-isofagomine and alpha- 1,2-mannobiose
分子名称: 1,2-ETHANEDIOL, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCOSYL HYDROLASE FAMILY 71, ...
著者Cuskin, F, Lowe, E.C, Temple, M.J, Zhu, Y, Pudlo, N.A, Cameron, E.A, Urs, K, Thompson, A.J, Cartmell, A, Rogowski, A, Tolbert, T, Piens, K, Bracke, D, Vervecken, W, Hakki, Z, Speciale, G, Munoz-Munoz, J.L, Pena, M.J, McLean, R, Suits, M.D, Boraston, A.B, Atherly, T, Ziemer, C.J, Williams, S.J, Davies, G.J, Abbott, D.W, Martens, E.C, Gilbert, H.J.
登録日2014-07-21
公開日2014-12-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
Nature, 517, 2015
4C1R
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BU of 4c1r by Molmil
Bacteroides thetaiotaomicron VPI-5482 mannosyl-6-phosphatase Bt3783
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, MANNOSYL-6-PHOSPHATASE
著者Cuskin, F, Lowe, E.C, Zhu, Y, Temple, M, Thompson, A.J, Cartmell, A, Piens, K, Bracke, D, Vervecken, W, Munoz-Munoz, J.L, Suits, M.D.L, Boraston, A.B, Williams, S.J, Davies, G.J, Abbott, W.D, Martens, E.C, Gilbert, H.J.
登録日2013-08-13
公開日2013-11-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
Nature, 517, 2015
4C1S
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BU of 4c1s by Molmil
Glycoside hydrolase family 76 (mannosidase) Bt3792 from Bacteroides thetaiotaomicron VPI-5482
分子名称: 1,2-ETHANEDIOL, GLYCEROL, GLYCOSIDE HYDROLASE FAMILY 76 MANNOSIDASE
著者Cuskin, F, Lowe, E.C, Zhu, Y, Temple, M, Thompson, A.J, Cartmell, A, Piens, K, Bracke, D, Vervecken, W, Munoz-Munoz, J.L, Suits, M.D.L, Boraston, A.B, Williams, S.J, Davies, G.J, Abbott, W.D, Martens, E.C, Gilbert, H.J.
登録日2013-08-13
公開日2013-11-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
Nature, 517, 2015
3ZMR
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BU of 3zmr by Molmil
Bacteroides ovatus GH5 xyloglucanase in complex with a XXXG heptasaccharide
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CELLULASE (GLYCOSYL HYDROLASE FAMILY 5), ...
著者Larsbrink, J, Rogers, T.E, Hemsworth, G.R, McKee, L.S, Spadiut, O, Klinter, S, Pudlo, N.A, Urs, K, Kelly, A.G, Cederholm, S.N, Davies, G.J, Martens, E.C, Brumer, H.
登録日2013-02-12
公開日2014-01-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献A Discrete Genetic Locus Confers Xyloglucan Metabolism in Select Human Gut Bacteroidetes
Nature, 506, 2014
4AW7
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BU of 4aw7 by Molmil
BpGH86A: A beta-porphyranase of glycoside hydrolase family 86 from the human gut bacterium Bacteroides plebeius
分子名称: 1,2-ETHANEDIOL, 6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-6-O-sulfo-alpha-L-galactopyranose-(1-3)-alpha-D-galactopyranose, CALCIUM ION, ...
著者Hehemann, J.H, Kelly, A.G, Pudlo, N.A, Martens, E.C, Boraston, A.B.
登録日2012-06-01
公開日2012-07-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4AWD
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BU of 4awd by Molmil
Crystal structure of the beta-porphyranase BpGH16B (BACPLE_01689) from the human gut bacterium Bacteroides plebeius
分子名称: BETA-PORPHYRANASE, CALCIUM ION, GLYCEROL
著者Hehemann, J.H, Kelly, A.G, Pudlo, N.A, Martens, E.C, Boraston, A.B.
登録日2012-06-01
公開日2012-07-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
7OQD
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BU of 7oqd by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1636-S1_20)
分子名称: 3-O-sulfo-beta-D-galactopyranose, Arylsulfatase, CALCIUM ION
著者Sofia de Jesus Vaz Luis, A, Basle, A, Martens, E.C, Cartmell, A.
登録日2021-06-03
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
4FEM
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BU of 4fem by Molmil
Structure of SusE with alpha-cyclodextrin
分子名称: 1,2-ETHANEDIOL, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Outer membrane protein SusE
著者Koropatkin, N.M, Cameron, E.A, Martens, E.C.
登録日2012-05-30
公開日2012-08-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
4FCH
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BU of 4fch by Molmil
Crystal Structure SusE from Bacteroides thetaiotaomicron with maltoheptaose
分子名称: 1,2-ETHANEDIOL, Outer membrane protein SusE, SULFATE ION, ...
著者Koropatkin, N.M, Cameron, E.A, Martens, E.C.
登録日2012-05-24
公開日2012-08-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
4FE9
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BU of 4fe9 by Molmil
Crystal Structure of SusF from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, Cyclic alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, GLYCEROL, ...
著者Koropatkin, N.M, Cameron, E.A, Martens, E.C.
登録日2012-05-29
公開日2012-08-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
7ALL
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BU of 7all by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT4683-S1_4)
分子名称: Arylsulfatase, CALCIUM ION, IODIDE ION, ...
著者Sofia de Jesus Vaz Luis, A, Martens, E.C, Basle, A, Cartmell, A.
登録日2020-10-06
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
7ANB
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BU of 7anb by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1622-S1_20)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, N-acetylgalactosamine-6-sulfatase, ...
著者Sofia de Jesus Vaz Luis, A, Basle, A, Martens, E.C, Cartmell, A.
登録日2020-10-11
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
7AN1
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BU of 7an1 by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1636-S1_20)
分子名称: Arylsulfatase, CALCIUM ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Sofia de Jesus Vaz Luis, A, Basle, A, Martens, E.C, Cartmell, A.
登録日2020-10-10
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
7ANA
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BU of 7ana by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1622-S1_20)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
著者Sofia de Jesus Vaz Luis, A, Basle, A, Martens, E.C, Cartmell, A.
登録日2020-10-11
公開日2021-11-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
3CKC
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BU of 3ckc by Molmil
B. thetaiotaomicron SusD
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-04-01
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CKB
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BU of 3ckb by Molmil
B. thetaiotaomicron SusD with maltotriose
分子名称: CALCIUM ION, SusD, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK8
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BU of 3ck8 by Molmil
B. thetaiotaomicron SusD with beta-cyclodextrin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK7
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BU of 3ck7 by Molmil
B. thetaiotaomicron SusD with alpha-cyclodextrin
分子名称: CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), SusD
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK9
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BU of 3ck9 by Molmil
B. thetaiotaomicron SusD with maltoheptaose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SusD, ...
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
5NBO
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BU of 5nbo by Molmil
Bacteroides ovatus mixed linkage glucan PUL (MLGUL) GH16
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase family 16
著者Hemsworth, G.R, Tamura, K, Dejean, G, Rogers, T.E, Pudlo, N.A, Urs, K, Jain, N, Martens, E.C, Brumer, H, Davies, G.J.
登録日2017-03-02
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.
Cell Rep, 21, 2017
5NBP
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BU of 5nbp by Molmil
Bacteroides ovatus mixed linkage glucan PUL (MLGUL) GH16 in complex with G4G4G3G Product
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16, ...
著者Hemsworth, G.R, Tamura, K, Dejean, G, Rogers, T.E, Pudlo, N.A, Urs, K, Jain, N, Martens, E.C, Brumer, H, Davies, G.J.
登録日2017-03-02
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.
Cell Rep, 21, 2017
8GEX
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BU of 8gex by Molmil
Crystal structure of the ferric enterobactin transporter (XusB) from Bacteroides thetaiotaomicron
分子名称: DUF4374 domain-containing protein
著者Perera, Y.R, Chazin, W.J.
登録日2023-03-07
公開日2023-08-02
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Iron acquisition by a commensal bacterium modifies host nutritional immunity during Salmonella infection.
Biorxiv, 2023
4ZXO
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BU of 4zxo by Molmil
The structure of a GH26 beta-mannanase from Bacteroides ovatus, BoMan26A.
分子名称: Glycosyl hydrolase family 26, PHOSPHATE ION, POTASSIUM ION
著者Bagenholm, V, Aurelius, O, Logan, D.T, Bouraoui, H, Stalbrand, H.
登録日2015-05-20
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A beta-MANNANASE.
J. Biol. Chem., 292, 2017
5OLQ
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BU of 5olq by Molmil
Rhamnogalacturonan lyase
分子名称: CALCIUM ION, PHOSPHATE ION, Rhamnogalacturonan lyase
著者Basle, A, Luis, A.S, Gilbert, H.J.
登録日2017-07-28
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides.
Nat Microbiol, 3, 2018

 

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