Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4R48
DownloadVisualize
BU of 4r48 by Molmil
Racemic crystal structure of a calcium-bound DNA four-way junction
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', CALCIUM ION, SODIUM ION
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
登録日2014-08-19
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R4D
DownloadVisualize
BU of 4r4d by Molmil
Racemic crystal structure of a magnesium-bound B-DNA duplex
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', MAGNESIUM ION, SODIUM ION
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
登録日2014-08-19
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R47
DownloadVisualize
BU of 4r47 by Molmil
Racemic crystal structure of a bimolecular DNA G-quadruplex (P21/n)
分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
登録日2014-08-19
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R44
DownloadVisualize
BU of 4r44 by Molmil
Racemic crystal structure of a tetramolecular DNA G-quadruplex
分子名称: 5'-D(*TP*GP*GP*GP*GP*T)-3', POTASSIUM ION, SODIUM ION
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
登録日2014-08-19
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
5ET9
DownloadVisualize
BU of 5et9 by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (P21/n)
分子名称: BARIUM ION, Pribnow box consensus sequence- template strand, Pribnow box non-template strand
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
登録日2015-11-17
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5HIX
DownloadVisualize
BU of 5hix by Molmil
Cocrystal structure of an anti-parallel DNA G-quadruplex and a tetra-Quinoline Foldamer
分子名称: 4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-nitroquinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinoline-2-carboxylic acid, Dimeric G-quadruplex, POTASSIUM ION
著者Mandal, P.K, Baptiste, B, Langlois d'Estaintot, B, Kauffmann, B, Huc, I.
登録日2016-01-12
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Multivalent Interactions between an Aromatic Helical Foldamer and a DNA G-Quadruplex in the Solid State.
Chembiochem, 17, 2016
1MOT
DownloadVisualize
BU of 1mot by Molmil
NMR Structure Of Extended Second Transmembrane Domain Of Glycine Receptor alpha1 Subunit in SDS Micelles
分子名称: Glycine Receptor alpha-1 CHAIN
著者Yushmanov, V.E, Mandal, P.K, Liu, Z, Tang, P, Xu, Y.
登録日2002-09-09
公開日2003-09-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structure and Backbone Dynamics of the Extended Second Transmembrane Domain of the Human Neuronal Glycine Receptor Alpha1 Subunit
Biochemistry, 42, 2003
5WV7
DownloadVisualize
BU of 5wv7 by Molmil
Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4A resolution
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-12-22
公開日2017-05-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.406 Å)
主引用文献Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6A1O
DownloadVisualize
BU of 6a1o by Molmil
Crystal structures of disordered Z-type helices
分子名称: DNA (5'-D(P*CP*A)-3'), DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*G)-3'), ...
著者Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
登録日2018-06-07
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
4ZKK
DownloadVisualize
BU of 4zkk by Molmil
The novel double-fold structure of d(GCATGCATGC)
分子名称: COBALT (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3')
著者Thirugnanasambandam, A, Karthik, S, Mandal, P.K, Gautham, N.
登録日2015-04-30
公開日2015-10-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The novel double-folded structure of d(GCATGCATGC): a possible model for triplet-repeat sequences
Acta Crystallogr.,Sect.D, 71, 2015
5IYE
DownloadVisualize
BU of 5iye by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3'), ZINC ION
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.694 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYG
DownloadVisualize
BU of 5iyg by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYJ
DownloadVisualize
BU of 5iyj by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
3HQE
DownloadVisualize
BU of 3hqe by Molmil
Crystal Structure of the decamer CGGGCGCCCG forming a Holliday junction
分子名称: 5'-D(*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3'
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2009-06-06
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Sequence dependent structural variation of Holliday junction - crystal structure of d(CGGGCGCCCG)4
To be Published
3HSW
DownloadVisualize
BU of 3hsw by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with 2-methoxycyclohexa-2-5-diene-1,4-dione
分子名称: 2-methoxycyclohexa-2,5-diene-1,4-dione, CALCIUM ION, Phospholipase A2, ...
著者Dileep, K.V, Tintu, I, Karthe, P, Mandal, P.K, Haridas, M, Sadasivan, C.
登録日2009-06-11
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of porcine pancreatic phospholipase A2 in complex with 2-methoxycyclohexa-2-5-diene-1,4-dione
Frontiers in life sci., 2012
3HS1
DownloadVisualize
BU of 3hs1 by Molmil
Structure of Holliday junction formed by d(CCGGTACCGG); Crystal grown with CoCl2
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3'
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2009-06-10
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of Holliday junction
To be Published
3IXN
DownloadVisualize
BU of 3ixn by Molmil
Crystal structure of d(CCGGTACCGG) as B-DNA duplex
分子名称: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2009-09-04
公開日2010-09-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex
To be Published
4OKL
DownloadVisualize
BU of 4okl by Molmil
Crystal Structure of d(CCCCGGTACCGGGG)2 at 1.65 Angstrom
分子名称: 14 mer A-DNA
著者Anna, V, Monica, P, Mandal, P.K, Gautham, N.
登録日2014-01-22
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of d(CCCCGGTACCGGGG)2 at 1.65 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4OAQ
DownloadVisualize
BU of 4oaq by Molmil
Crystal structure of the R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Aggrawal, N, Mandal, P.K, Gautham, N, Chadha, A.
登録日2014-01-06
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.858 Å)
主引用文献Insights into the stereoselectivity of R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330: Biochemical Characterization and Crystal structure studies
To be Published
3TCI
DownloadVisualize
BU of 3tci by Molmil
Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
分子名称: DNA (5'-D(P*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2011-08-09
公開日2011-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.421 Å)
主引用文献Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
To be Published
3O4M
DownloadVisualize
BU of 3o4m by Molmil
Crystal structure of porcine pancreatic phospholipase A2 in complex with 1,2-dihydroxybenzene
分子名称: CALCIUM ION, CATECHOL, Phospholipase A2, ...
著者Dileep, K.V, Tintu, I, Karthe, P, Mandal, P.K, Haridas, M, Sadasivan, C.
登録日2010-07-27
公開日2010-08-25
最終更新日2011-11-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Binding to PLA(2) may contribute to the anti-inflammatory activity of catechol
Chem.Biol.Drug Des., 2011
3Q5C
DownloadVisualize
BU of 3q5c by Molmil
Crystal structure of four-way junction with sticky end
分子名称: DNA (5'-D(*CP*GP*GP*CP*GP*GP*CP*CP*GP*C)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2010-12-28
公開日2011-05-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献The sequence d(CGGCGGCCGC) self-assembles into a two dimensional rhombic DNA lattice
Biochem.Biophys.Res.Commun., 407, 2011
3QLM
DownloadVisualize
BU of 3qlm by Molmil
Crystal structure of porcine pancreatic phospholipase A2 in complex with n-hexadecanoic acid
分子名称: CALCIUM ION, PALMITIC ACID, Phospholipase A2, ...
著者Aparna, V, Dileep, K.V, Karthe, P, Mandal, P.K, Sadasivan, C, Haridas, M.
登録日2011-02-03
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Anti-inflammatory property of n-hexadecanoic acid: Structural evidence and Kinetic assessment.
Chem.Biol.Drug Des., 2012
3QK4
DownloadVisualize
BU of 3qk4 by Molmil
Crystal structure of d(CGCGGGTACCCGCG)2 as A-DNA duplex
分子名称: DNA (5'-D(*CP*GP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*CP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2011-01-31
公開日2011-03-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The structure of a full turn of an A-DNA duplex d(CGCGGGTACCCGCG)(2)
Biochem.Biophys.Res.Commun., 407, 2011
3R86
DownloadVisualize
BU of 3r86 by Molmil
Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex grown with 5 mM CoCl2
分子名称: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2011-03-23
公開日2011-04-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex
To be Published

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon