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5LAQ
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BU of 5laq by Molmil
Crystal structure of human phosphodiesterase 4B catalytic domain with inhibitor NPD-001
Descriptor: (4~{a}~{S},8~{a}~{R})-2-cycloheptyl-4-[4-methoxy-3-[4-[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenoxy]butoxy]phenyl]-4~{a},5,8,8~{a}-tetrahydrophthalazin-1-one, ACETATE ION, MAGNESIUM ION, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2016-06-14
Release date:2018-03-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Targeting a Subpocket in Trypanosoma brucei Phosphodiesterase B1 (TbrPDEB1) Enables the Structure-Based Discovery of Selective Inhibitors with Trypanocidal Activity.
J. Med. Chem., 61, 2018
5LBO
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BU of 5lbo by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-001
Descriptor: (4~{a}~{S},8~{a}~{R})-2-cycloheptyl-4-[4-methoxy-3-[4-[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenoxy]butoxy]phenyl]-4~{a},5,8,8~{a}-tetrahydrophthalazin-1-one, 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2016-06-16
Release date:2018-03-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Targeting a Subpocket in Trypanosoma brucei Phosphodiesterase B1 (TbrPDEB1) Enables the Structure-Based Discovery of Selective Inhibitors with Trypanocidal Activity.
J. Med. Chem., 61, 2018
6FDX
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BU of 6fdx by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1086
Descriptor: (4aS,8aR)-2-[1-(2-aminoquinazolin-4-yl)piperidin-4-yl]-4-(3,4-dimethoxyphenyl)-1,2,4a,5,8,8a-hexahydrophthalazin-1-one, FORMIC ACID, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-27
Release date:2019-04-10
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:TbrPDEB1 structure with inhibitor NPD-1086
To be published
6FEB
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BU of 6feb by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1086
Descriptor: (4aS,8aR)-2-[1-(2-aminoquinazolin-4-yl)piperidin-4-yl]-4-(3,4-dimethoxyphenyl)-1,2,4a,5,8,8a-hexahydrophthalazin-1-one, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-31
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:hPDE4D2 structure with inhibitor NPD-1086
To be published
6FDI
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BU of 6fdi by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-226
Descriptor: 1,2-ETHANEDIOL, 1-[2-[4-[(4~{a}~{S},8~{a}~{R})-4-(3,4-dimethoxyphenyl)-1-oxidanylidene-4~{a},5,8,8~{a}-tetrahydrophthalazin-2-yl]piperi din-1-yl]-2-oxidanylidene-ethyl]-4,4-dimethyl-piperidine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-24
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:hPDE4D2 structure with inhibitor NPD-226
To be published
6FDW
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BU of 6fdw by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-356
Descriptor: (4aS,8aR)-2-(1-{2-aminothieno[2,3-d]pyrimidin-4-yl}piperidin-4-yl)-4-(3,4- dimethoxyphenyl)-1,2,4a,5,8,8a-hexahydrophthalazin-1-one, GLYCEROL, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-27
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:TbrPDEB1 structure with inhibitor NPD-356
To be published
6FE3
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BU of 6fe3 by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1439
Descriptor: 1-(2-{4-[(4aS,8aR)-4-[3,4-bis(difluoromethoxy)phenyl]-1-oxo-1,2,4a,5,8,8a-hexahydrophthalazin-2-yl]piperidin-1-yl}-2-oxoethyl)-4,4-dimethylpiperidine-2,6-dione, FORMIC ACID, GLYCEROL, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-28
Release date:2019-04-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:TbrPDEB1 structure with inhibitor NPD-1439
To be published
6FDS
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BU of 6fds by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-226
Descriptor: 1-[2-[4-[(4~{a}~{S},8~{a}~{R})-4-(3,4-dimethoxyphenyl)-1-oxidanylidene-4~{a},5,8,8~{a}-tetrahydrophthalazin-2-yl]piperi din-1-yl]-2-oxidanylidene-ethyl]-4,4-dimethyl-piperidine-2,6-dione, GLYCEROL, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-26
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:TbrPDEB1 structure with inhibitor NPD-226
To be published
6FE7
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BU of 6fe7 by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-356
Descriptor: (4aS,8aR)-2-(1-{2-aminothieno[2,3-d]pyrimidin-4-yl}piperidin-4-yl)-4-(3,4- dimethoxyphenyl)-1,2,4a,5,8,8a-hexahydrophthalazin-1-one, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2017-12-29
Release date:2019-04-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:hPDE4D2 structure with inhibitor NPD-356
To be published
6FET
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BU of 6fet by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1439
Descriptor: 1,2-ETHANEDIOL, 1-(2-{4-[(4aS,8aR)-4-[3,4-bis(difluoromethoxy)phenyl]-1-oxo-1,2,4a,5,8,8a-hexahydrophthalazin-2-yl]piperidin-1-yl}-2-oxoethyl)-4,4-dimethylpiperidine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-01-03
Release date:2019-04-24
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:hPDE4D2 structure with inhibitor NPD-1439
To be published
6FW3
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BU of 6fw3 by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-007
Descriptor: 1,2-ETHANEDIOL, 1-(2-{4-[(4aS,8aR)-4-(3,4-dimethoxyphenyl)-1-oxo-1,2,4a,5,8,8a-hexahydrophthalazin-2-yl]piperidin-1-yl}-2-oxoethyl)pyrrolidine-2,5-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-03-05
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:hPDE4D2 structure with inhibitor NPD-007
To be published
6FV9
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BU of 6fv9 by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-007
Descriptor: 1-(2-{4-[(4aS,8aR)-4-(3,4-dimethoxyphenyl)-1-oxo-1,2,4a,5,8,8a-hexahydrophthalazin-2-yl]piperidin-1-yl}-2-oxoethyl)pyrrolidine-2,5-dione, GLYCEROL, MAGNESIUM ION, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-03-01
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:TbrPDEB1 structure with inhibitor NPD-007
To be published
6FTW
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BU of 6ftw by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-048
Descriptor: 1,2-ETHANEDIOL, 3-{5-[(4aR,8aS)-3-cycloheptyl-4-oxo-3,4,4a,5,8,8a-hexahydrophthalazin-1-yl]-2-methoxyphenyl}prop-2-ynamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-02-24
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Alkynamide phthalazinones as a new class of TbrPDEB1 inhibitors.
Bioorg.Med.Chem., 27, 2019
6GXQ
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BU of 6gxq by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1335
Descriptor: 3-[5-[(4aR,8aS)-4-OXIDANYLIDENE-3-PROPAN-2-YL-4a,5,8,8a-TETRAHYDROPHTHALAZIN-1-YL]-2-METHOXY-PHENYL]-N-(PHENYLMETHYL)PROP-2-YNAMIDE, GLYCEROL, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-06-27
Release date:2019-07-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Alkynamide phthalazinones as a new class of TbrPDEB1 inhibitors (Part 2).
Bioorg.Med.Chem., 27, 2019
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