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8X7U
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BU of 8x7u by Molmil
MCM in complex with dsDNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:MCM in complex with dsDNA in presence of ATP
To Be Published
6D45
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BU of 6d45 by Molmil
L89S Mutant of FeBMb Sperm Whale Myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhagi-Damodaran, A, Mirts, E.N, Sandoval, B, Lu, Y.
Deposit date:2018-04-17
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Heme redox potentials hold the key to reactivity differences between nitric oxide reductase and heme-copper oxidase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1LUF
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BU of 1luf by Molmil
Crystal Structure of the MuSK Tyrosine Kinase: Insights into Receptor Autoregulation
Descriptor: muscle-specific tyrosine kinase receptor musk
Authors:Till, J.H, Becerra, M, Watty, A, Lu, Y, Ma, Y, Neubert, T.A, Burden, S.J, Hubbard, S.R.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the MuSK tyrosine kinase: insights into receptor autoregulation.
Structure, 10, 2002
1HZ3
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BU of 1hz3 by Molmil
ALZHEIMER'S DISEASE AMYLOID-BETA PEPTIDE (RESIDUES 10-35)
Descriptor: A-BETA AMYLOID
Authors:Zhang, S, Iwata, K, Lachenmann, M.J, Peng, J.W, Li, S, Stimson, E.R, Lu, Y, Felix, A.M, Maggio, J.E, Lee, J.P.
Deposit date:2001-01-23
Release date:2001-01-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The Alzheimer's peptide a beta adopts a collapsed coil structure in water.
J.Struct.Biol., 130, 2000
2FDP
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BU of 2fdp by Molmil
Crystal structure of beta-secretase complexed with an amino-ethylene inhibitor
Descriptor: Beta-secretase 1, N1-((2S,3S,5R)-3-AMINO-6-(4-FLUOROPHENYLAMINO)-5-METHYL-6-OXO-1-PHENYLHEXAN-2-YL)-N3,N3-DIPROPYLISOPHTHALAMIDE
Authors:Yang, W, Lu, W, Lu, Y, Zhong, M, Sun, J, Thomas, A.E, Wilkinson, J.M, Fucini, R.V, Lam, M, Randal, M, Shi, X.P, Jacobs, J.W, McDowell, R.S, Gordon, E.M, Ballinger, M.D.
Deposit date:2005-12-14
Release date:2006-01-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Aminoethylenes: a tetrahedral intermediate isostere yielding potent inhibitors of the aspartyl protease BACE-1.
J.Med.Chem., 49, 2006
8WD2
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BU of 8wd2 by Molmil
The Crystal Structure of p53 from Biortus.
Descriptor: 1,2-ETHANEDIOL, Cellular tumor antigen p53, PHOSPHATE ION, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Lu, Y.
Deposit date:2023-09-14
Release date:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of p53 from Biortus.
To Be Published
8X2P
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BU of 8x2p by Molmil
The Crystal Structure of LCK from Biortus.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, TETRAETHYLENE GLYCOL, ...
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
Deposit date:2023-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Crystal Structure of LCK from Biortus.
To Be Published
8X2R
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BU of 8x2r by Molmil
The Crystal Structure of HSP 90-alpha from Biortus.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Heat shock protein HSP 90-alpha
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
Deposit date:2023-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Crystal Structure of HSP 90-alpha from Biortus.
To Be Published
8WFF
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BU of 8wff by Molmil
The Crystal Structure of LYN from Biortus.
Descriptor: CHLORIDE ION, CITRATE ANION, Tyrosine-protein kinase Lyn
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Lu, Y.
Deposit date:2023-09-19
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Crystal Structure of LYN from Biortus.
To Be Published
8WFR
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BU of 8wfr by Molmil
The Crystal Structure of PCSK9 from Biortus.
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
Deposit date:2023-09-20
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Crystal Structure of PCSK9 from Biortus.
To Be Published
8YHS
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BU of 8yhs by Molmil
The Crystal Structure of BRDT from Biortus.
Descriptor: 1,2-ETHANEDIOL, 2,4-dimethyl-6-[6-(oxan-4-yl)-1-[(1~{S})-1-phenylethyl]imidazo[4,5-c]pyridin-2-yl]pyridazin-3-one, Bromodomain testis-specific protein
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
Deposit date:2024-02-28
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of BRDT from Biortus.
To Be Published
8EKO
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BU of 8eko by Molmil
Sperm whale myoglobin mutant L29H F33W F43H (F33W CuBMb)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ledray, A.P, Dwaraknath, S, Lu, Y.
Deposit date:2022-09-21
Release date:2022-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Tryptophan Can Promote Oxygen Reduction to Water in a Biosynthetic Model of Heme Copper Oxidases.
Biochemistry, 62, 2023
4QLW
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BU of 4qlw by Molmil
Azurin mutant M121E with iron
Descriptor: Azurin, FE (III) ION, NITRATE ION, ...
Authors:Liu, J, Robinson, H, Lu, Y.
Deposit date:2014-06-13
Release date:2014-08-13
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Redesigning the Blue Copper Azurin into a Redox-Active Mononuclear Nonheme Iron Protein: Preparation and Study of Fe(II)-M121E Azurin.
J.Am.Chem.Soc., 136, 2014
4QKT
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BU of 4qkt by Molmil
Azurin mutant M121EM44K with copper
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Azurin, ...
Authors:Liu, J, Robinson, H, Lu, Y.
Deposit date:2014-06-09
Release date:2014-08-13
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Redesigning the Blue Copper Azurin into a Redox-Active Mononuclear Nonheme Iron Protein: Preparation and Study of Fe(II)-M121E Azurin.
J.Am.Chem.Soc., 136, 2014
7TNC
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BU of 7tnc by Molmil
M13F/G116F Pseudomonas aeruginosa azurin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, CHLORIDE ION, ...
Authors:Liu, Y, Lu, Y.
Deposit date:2022-01-20
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Basis for the Effects of Phenylalanine on Tuning the Reduction Potential of Type 1 Copper in Azurin.
Inorg.Chem., 62, 2023
7U2F
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BU of 7u2f by Molmil
G116F Pseudomonas aeruginosa azurin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, COPPER (II) ION
Authors:Liu, Y, Lu, Y.
Deposit date:2022-02-23
Release date:2023-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the Effects of Phenylalanine on Tuning the Reduction Potential of Type 1 Copper in Azurin.
Inorg.Chem., 62, 2023
4TYX
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BU of 4tyx by Molmil
Structure of aquoferric sperm whale myoglobin L29H/F33Y/F43H/S92A mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhagi-Damodaran, A, Petrik, I.D, Robinson, H, Lu, Y.
Deposit date:2014-07-09
Release date:2014-08-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Systematic tuning of heme redox potentials and its effects on O2 reduction rates in a designed oxidase in myoglobin.
J.Am.Chem.Soc., 136, 2014
1MP1
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BU of 1mp1 by Molmil
Solution structure of the PWI motif from SRm160
Descriptor: Ser/Arg-related nuclear matrix protein
Authors:Szymczyna, B.R, Bowman, J, McCracken, S, Pineda-Lucena, A, Lu, Y, Cox, B, Lambermon, M, Graveley, B.R, Arrowsmith, C.H, Blencowe, B.J.
Deposit date:2002-09-11
Release date:2003-09-16
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure and function of the PWI motif: a novel nucleic acid-binding domain that facilitates pre-mRNA processing.
Genes Dev., 17, 2003
8ITU
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BU of 8itu by Molmil
SARS-CoV-2 Omicron BA.1 Spike glycoprotein in complex with rabbit monoclonal antibody 1H1 IgG.
Descriptor: 1H1 heavy chain, 1H1 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
Deposit date:2023-03-23
Release date:2023-04-12
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Mechanism of a rabbit monoclonal antibody broadly neutralizing SARS-CoV-2 variants
Commun Biol, 6, 2023
4LYC
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BU of 4lyc by Molmil
Cd ions within a lysoyzme single crystal
Descriptor: CADMIUM ION, Lysozyme C
Authors:Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y.
Deposit date:2013-07-30
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
4LYB
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BU of 4lyb by Molmil
CdS within a lysoyzme single crystal
Descriptor: CADMIUM ION, Lysozyme C
Authors:Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y.
Deposit date:2013-07-30
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
1U1Z
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BU of 1u1z by Molmil
The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Descriptor: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, SULFATE ION
Authors:Kimber, M.S, Martin, F, Lu, Y, Houston, S, Vedadi, M, Dharamsi, A, Fiebig, K.M, Schmid, M, Rock, C.O.
Deposit date:2004-07-16
Release date:2004-09-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of (3R)-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Pseudomonas aeruginosa
J.Biol.Chem., 279, 2004
4HK4
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BU of 4hk4 by Molmil
Crystal structure of apo Tyrosine-tRNA ligase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Tyrosine--tRNA ligase
Authors:Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
Deposit date:2012-10-15
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Crystal structure of apo Tyrosine-tRNA ligase mutant protein
To be Published
4HPW
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BU of 4hpw by Molmil
Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
Descriptor: 3-methoxy-L-tyrosine, Tyrosine--tRNA ligase
Authors:Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
Deposit date:2012-10-24
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
To be Published
5VNU
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BU of 5vnu by Molmil
Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Mn-bound FeBMb
Descriptor: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Reed, J, Shi, Y, Zhu, Q, Chakraborty, S, Mirs, E.N, Petrik, I.D, Bhagi-Damodaran, A, Ross, M, Moenne-Loccoz, P, Zhang, Y, Lu, Y.
Deposit date:2017-05-01
Release date:2017-08-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.584 Å)
Cite:Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.
J. Am. Chem. Soc., 139, 2017

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PDB entries from 2024-04-24

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