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8G73
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BU of 8g73 by Molmil
SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 bound at 2.5 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, ...
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G72
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BU of 8g72 by Molmil
SARS-CoV-2 spike/Nb2 complex with 1 RBD up (local refinement at 5.6 A)
Descriptor: Nanosota-2, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19.
J.Virol., 97, 2023
8G71
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BU of 8g71 by Molmil
Spike/Nb2 complex with 1 RBD up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:SARS-CoV-2 spike/Nb2 complex with 1 RBD up
To Be Published
8G7A
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BU of 8g7a by Molmil
SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement)
To Be Published
8G70
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BU of 8g70 by Molmil
SARS-CoV-2 spike/nanobody mixture complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, ...
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:SARS-CoV-2 spike/nanobody mixture complex
To Be Published
8G7B
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BU of 8g7b by Molmil
SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3
To Be Published
8G7C
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BU of 8g7c by Molmil
local refinement of SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-4, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:local refinement of SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound
To Be Published
8G78
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BU of 8g78 by Molmil
Local refinement of SARS-CoV-2 spike/nanobody mixture complex around NTD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-5, Nanosota-6, ...
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Local refinement of SARS-CoV-2 spike/nanobody mixture complex around NTD
To Be Published
8G79
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BU of 8g79 by Molmil
Local refinement of SARS-CoV-2 spike/nanobody mixture complex around RBD
Descriptor: Nanosota-3, Nanosota-4, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Local refinement of SARS-CoV-2 spike/nanobody mixture complex around RBD
To Be Published
8G77
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BU of 8g77 by Molmil
SARS-CoV-2 spike/Nb6 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-6, ...
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 spike/Nb6 complex
To Be Published
8G76
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BU of 8g76 by Molmil
SARS-CoV-2 spike/Nb5 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-5, ...
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:SARS-CoV-2 spike/Nb5 complex
To Be Published
1YUK
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BU of 1yuk by Molmil
The crystal structure of the PSI/Hybrid domain/ I-EGF1 segment from the human integrin beta2 at 1.8 resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Integrin beta-2 A chain, Integrin beta-2 B chain
Authors:Shi, M, Sundramurthy, K, Liu, B, Tan, S.M, Law, S.K, Lescar, J.
Deposit date:2005-02-14
Release date:2005-07-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin {beta}2 Subunit at 1.8-A Resolution
J.Biol.Chem., 280, 2005
5TDH
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BU of 5tdh by Molmil
The crystal structure of the dominant negative mutant G protein alpha(i)-1-beta-1-gamma-2 G203A/A326S
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Liu, P, Jia, M.-Z, Zhou, X.E, de Waal, P.W, Dickson, B.M, Liu, B, Hou, L, Yin, Y.-T, Kang, Y.-Y, Shi, Y, Melcher, K, Xu, H.E, Jiang, Y.
Deposit date:2016-09-19
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structural basis of the dominant negative phenotype of the G alpha i1 beta 1 gamma 2 G203A/A326S heterotrimer
Acta Pharmacol.Sin., 37, 2016
5V54
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BU of 5v54 by Molmil
Crystal structure of 5-HT1B receptor in complex with methiothepin
Descriptor: 1-methyl-4-[(5~{S})-3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl]piperazine, 5-hydroxytryptamine receptor 1B,OB-1 fused 5-HT1b receptor,5-hydroxytryptamine receptor 1B
Authors:Yin, W.C, Zhou, X.E, Yang, D, de Waal, P, Wang, M.T, Dai, A, Cai, X, Huang, C.Y, Liu, P, Yin, Y, Liu, B, Caffrey, M, Melcher, K, Xu, Y, Wang, M.W, Xu, H.E, Jiang, Y.
Deposit date:2017-03-13
Release date:2018-02-07
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:A common antagonistic mechanism for class A GPCRs revealed by the structure of the human 5-HT1B serotonin receptor bound to an antagonist
Cell Discov, 2018
1STS
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BU of 1sts by Molmil
STREPTAVIDIN DIMERIZED BY DISULFIDE-BONDED PEPTIDE FCHPQNT-NH2 DIMER
Descriptor: FCHPQNT-NH2, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T, Liu, B, Arze, R, Collins, N.
Deposit date:1995-09-12
Release date:1996-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Topochemical catalysis achieved by structure-based ligand design.
J.Biol.Chem., 270, 1995
1STR
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BU of 1str by Molmil
STREPTAVIDIN DIMERIZED BY DISULFIDE-BONDED PEPTIDE AC-CHPQNT-NH2 DIMER
Descriptor: AC-CHPQNT-NH2, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T, Liu, B, Arze, R, Collins, N.
Deposit date:1995-09-12
Release date:1996-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Topochemical catalysis achieved by structure-based ligand design.
J.Biol.Chem., 270, 1995
4F24
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BU of 4f24 by Molmil
Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB
Descriptor: Clumping factor B, MAGNESIUM ION
Authors:Yang, M.J, Xiang, H, Wang, J.W, Liu, B, Chen, Y.G, Liu, L, Deng, X.M, Feng, Y.
Deposit date:2012-05-07
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.509 Å)
Cite:Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus aureus ClfB
Plos Pathog., 8, 2012
4F1Z
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BU of 4f1z by Molmil
Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB
Descriptor: Clumping factor B, MAGNESIUM ION, peptide from Keratin, ...
Authors:Yang, M.J, Xiang, H, Wang, J.W, Liu, B, Chen, Y.G, Liu, L, Deng, X.M, Feng, Y.
Deposit date:2012-05-07
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus aureus ClfB
Plos Pathog., 8, 2012
4F27
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BU of 4f27 by Molmil
Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB
Descriptor: Clumping factor B, MAGNESIUM ION, peptide from Fibrinogen alpha chain
Authors:Yang, M.J, Xiang, H, Wang, J.W, Liu, B, Chen, Y.G, Liu, L, Deng, X.M, Feng, Y.
Deposit date:2012-05-07
Release date:2012-08-08
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.917 Å)
Cite:Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus aureus ClfB
Plos Pathog., 8, 2012
4F20
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BU of 4f20 by Molmil
Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB
Descriptor: Clumping factor B, MAGNESIUM ION, peptide from Dermokine
Authors:Yang, M.J, Xiang, H, Wang, J.W, Liu, B, Chen, Y.G, Liu, L, Deng, X.M, Feng, Y.
Deposit date:2012-05-07
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus aureus ClfB
Plos Pathog., 8, 2012
6F24
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BU of 6f24 by Molmil
PH domain from PfAPH
Descriptor: C-terminal PH domain from PfAPH
Authors:Darvill, N, Liu, B, Matthews, S, Soldati-Favre, D, Rouse, S, Benjamin, S, Blake, T, Dubois, D.J, Hammoudi, P.M, Pino, P.
Deposit date:2017-11-23
Release date:2018-12-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:C-terminal PH domain from P. falciparum acylated plekstrin homology domain containing protein (APH)
To Be Published
6F8E
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BU of 6f8e by Molmil
PH domain from TgAPH
Descriptor: Pleckstrin homology domain
Authors:Darvill, N, Liu, B, Matthews, S, Soldati-Favre, D, Rouse, S, Benjamin, S, Blake, T, Dubois, D.J, Hammoudi, P.M, Pino, P.
Deposit date:2017-12-13
Release date:2019-01-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of Phosphatidic Acid Sensing by APH in Apicomplexan Parasites.
Structure, 26, 2018
6GZ8
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BU of 6gz8 by Molmil
First GerMN domain of the sporulation protein GerM from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Spore germination protein GerM
Authors:Trouve, J, Mohamed, A, Leisico, F, Contreras-Martel, C, Liu, B, Mas, C, Rudner, D.Z, Rodrigues, C.D.A, Morlot, C.
Deposit date:2018-07-03
Release date:2018-10-10
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural characterization of the sporulation protein GerM from Bacillus subtilis.
J. Struct. Biol., 204, 2018
6GZB
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BU of 6gzb by Molmil
Tandem GerMN domains of the sporulation protein GerM from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Spore germination protein GerM
Authors:Trouve, J, Mohamed, A, Leisico, F, Contreras-Martel, C, Liu, B, Mas, C, Rudner, D.Z, Rodrigues, C.D.A, Morlot, C.
Deposit date:2018-07-03
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of the sporulation protein GerM from Bacillus subtilis.
J. Struct. Biol., 204, 2018
8ENR
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BU of 8enr by Molmil
Cryo-EM structure of E. coli CsgA fibril (260 pixel box size)
Descriptor: Major curlin subunit
Authors:Bu, F, Liu, B.
Deposit date:2022-09-30
Release date:2023-10-04
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insight into Escherichia coli CsgA amyloid fibril assembly.
Mbio, 15, 2024

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