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1SMA
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BU of 1sma by Molmil
CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE
Descriptor: MALTOGENIC AMYLASE
Authors:Kim, J.S, Cha, S.S, Oh, B.H.
Deposit date:1999-04-21
Release date:2000-04-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.
J.Biol.Chem., 274, 1999
1T6S
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BU of 1t6s by Molmil
Crystal structure of a conserved hypothetical protein from Chlorobium tepidum
Descriptor: NITRATE ION, conserved hypothetical protein
Authors:Kim, J.S, Shin, D.H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning.
Proteins, 62, 2006
1R6V
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BU of 1r6v by Molmil
Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Descriptor: CALCIUM ION, subtilisin-like serine protease
Authors:Kim, J.S, Kluskens, L.D, de Vos, W.M, Huber, R, van der Oost, J.
Deposit date:2003-10-17
Release date:2004-10-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.
J.Mol.Biol., 335, 2004
1YF2
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BU of 1yf2 by Molmil
Three-dimensional structure of DNA sequence specificity (S) subunit of a type I restriction-modification enzyme and its functional implications
Descriptor: Type I restriction-modification enzyme, S subunit
Authors:Kim, J.S, Degiovanni, A, Jancarik, J, Adams, P.D, Yokota, H.A, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-12-30
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications.
Proc.Natl.Acad.Sci.USA, 102, 2005
5CHI
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BU of 5chi by Molmil
Crystal structure of PF2046 in complex with ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*T)-3'), MAGNESIUM ION, Uncharacterized protein
Authors:Kim, J.S, Hwang, K.Y, Lee, W.C.
Deposit date:2015-07-10
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural basis of two-nucleotide removal of ssDNA by a cryptic RNase H fold 3'-5' exonuclease PF2046 from Pyrococcus furiosus
to be published
4WFQ
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BU of 4wfq by Molmil
Crystal structure of TFIIH subunit
Descriptor: GLYCEROL, SULFATE ION, Suppressor of stem-loop protein 1
Authors:Cho, Y, Kim, J.S, Lim, H.S.
Deposit date:2014-09-17
Release date:2015-02-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44
J.Biol.Chem., 290, 2015
4QA8
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BU of 4qa8 by Molmil
Crystal structure of LprF from Mycobacterium bovis
Descriptor: (2R)-2-(dodecanoyloxy)propyl (4E,6E,8E,10E,12E)-pentadeca-4,6,8,10,12-pentaenoate, Putative lipoprotein LprF
Authors:Ha, N.C, Jiao, L, Kim, J.S.
Deposit date:2014-05-02
Release date:2014-10-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure and functional implications of LprF from Mycobacterium tuberculosis and M. bovis
Acta Crystallogr.,Sect.D, 70, 2014
5C22
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BU of 5c22 by Molmil
Crystal structure of Zn-bound HlyD from E. coli
Descriptor: Chromosomal hemolysin D, ZINC ION
Authors:Ha, N.C, Kim, J.S.
Deposit date:2015-06-15
Release date:2016-02-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
5C21
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BU of 5c21 by Molmil
Crystal structure of native HlyD from E. coli
Descriptor: Chromosomal hemolysin D
Authors:Ha, N.C, Kim, J.S, Yoon, B.Y.
Deposit date:2015-06-15
Release date:2016-02-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
5BZA
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BU of 5bza by Molmil
Crystal structure of CbsA from Thermotoga neapolitana
Descriptor: Beta-N-acetylhexosaminidase, CADMIUM ION
Authors:Ha, N.C, Kim, J.S, Yoon, B.Y.
Deposit date:2015-06-11
Release date:2015-09-16
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
5C0Q
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BU of 5c0q by Molmil
Crystal structure of Zn bound CbsA from Thermotoga neapolitana
Descriptor: Beta-N-acetylhexosaminidase, ZINC ION
Authors:Ha, N.C, Kim, J.S, Yoon, B.Y.
Deposit date:2015-06-12
Release date:2015-09-16
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
3TIS
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BU of 3tis by Molmil
Crystal structures of yrdA from Escherichia coli, a homologous protein of gamma-class carbonic anhydrases, show possible allosteric conformations
Descriptor: Protein YrdA, ZINC ION
Authors:Park, H.M, Chio, J.W, Lee, J.E, Jung, J.H, Kim, B.Y, Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
3TIO
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BU of 3tio by Molmil
Crystal structures of yrdA from Escherichia coli, a homologous protein of gamma-class carbonic anhydrase, show possible allosteric conformations
Descriptor: PHOSPHATE ION, Protein YrdA, ZINC ION
Authors:Park, H.M, Choi, J.W, Lee, J.E, Jung, C.H, Kim, B.Y, Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
7BVB
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BU of 7bvb by Molmil
Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium bovis in complex with UDP-N-acetylglucosamine
Descriptor: UDP-N-acetylmuramate--L-alanine ligase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, ZINC ION
Authors:Seo, P.W, Kim, J.S.
Deposit date:2020-04-10
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Crystal structures of UDP-N-acetylmuramic acid L-alanine ligase (MurC) from Mycobacterium bovis with and without UDP-N-acetylglucosamine.
Acta Crystallogr D Struct Biol, 77, 2021
7BVA
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BU of 7bva by Molmil
Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium bovis
Descriptor: UDP-N-acetylmuramate--L-alanine ligase, ZINC ION
Authors:Seo, P.W, Kim, J.S.
Deposit date:2020-04-10
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structures of UDP-N-acetylmuramic acid L-alanine ligase (MurC) from Mycobacterium bovis with and without UDP-N-acetylglucosamine.
Acta Crystallogr D Struct Biol, 77, 2021
8I07
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BU of 8i07 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
Descriptor: 2-oxidanylethanal, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I08
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BU of 8i08 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I01
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BU of 8i01 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I05
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BU of 8i05 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
7XZ3
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BU of 7xz3 by Molmil
Crystal structure of the Type I-B CRISPR-associated protein, Csh2 from Thermobaculum terrenum
Descriptor: CRISPR-associated protein, Csh2 family
Authors:Seo, P.W, Gu, D.H, Park, S.Y, Kim, J.S.
Deposit date:2022-06-02
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Structural characterization of the type I-B CRISPR Cas7 from Thermobaculum terrenum.
Biochim Biophys Acta Proteins Proteom, 1871, 2023
6J7H
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BU of 6j7h by Molmil
Crystal structure of blue fluorescent protein from metagenomic library
Descriptor: Blue fluorescent protein
Authors:Seo, P.W, Kim, J.S.
Deposit date:2019-01-18
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:Structure-Guided Generation of a Redox-Independent Blue Fluorescent Protein from mBFP.
J.Mol.Biol., 431, 2019
6J7U
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BU of 6j7u by Molmil
Crystal structure of blue fluorescent protein from metagenomic library in complex with NADPH
Descriptor: Blue fluorescent protein, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Seo, P.W, Kim, J.S.
Deposit date:2019-01-18
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structure-Guided Generation of a Redox-Independent Blue Fluorescent Protein from mBFP.
J.Mol.Biol., 431, 2019
5GUS
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BU of 5gus by Molmil
Crystal structure of ASCH domain from Zymomonas mobilis
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, Helix-turn-helix domain-containing protein, ...
Authors:Ha, S.C, Park, S.Y, Kim, J.S.
Deposit date:2016-08-31
Release date:2017-08-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Crystal structure of an ASCH protein from Zymomonas mobilis and its ribonuclease activity specific for single-stranded RNA.
Sci Rep, 7, 2017
3UFC
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BU of 3ufc by Molmil
Characterization of a Cas6-related gene from Pyrococcus furiosus
Descriptor: Putative uncharacterized protein
Authors:Park, H.M, Kim, J.S.
Deposit date:2011-11-01
Release date:2012-03-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a Cas6 paralogous protein from Pyrococcus furiosus
Proteins, 80, 2012
4Y0M
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BU of 4y0m by Molmil
The reduced form of OxyR regulatory domain from Psedomonas aeruginosa
Descriptor: OxyR
Authors:Jo, I, Kim, J.S, Ha, N.C.
Deposit date:2015-02-06
Release date:2015-04-29
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural details of the OxyR peroxide-sensing mechanism
Proc.Natl.Acad.Sci.USA, 112, 2015

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