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2YWV
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BU of 2ywv by Molmil
Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole succinocarboxamide synthetase, ...
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
To be Published
2YWB
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BU of 2ywb by Molmil
Crystal structure of GMP synthetase from Thermus thermophilus
Descriptor: GMP synthase [glutamine-hydrolyzing]
Authors:Baba, S, Kanagawa, M, Yanai, H, Ishii, T, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YYT
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BU of 2yyt by Molmil
Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Descriptor: Orotidine 5'-phosphate decarboxylase
Authors:Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
2YZK
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BU of 2yzk by Molmil
Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
Descriptor: Orotate phosphoribosyltransferase, PHOSPHATE ION
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
To be Published
2Z01
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BU of 2z01 by Molmil
Crystal structure of phosphoribosylaminoimidazole synthetase from Geobacillus kaustophilus
Descriptor: Phosphoribosylformylglycinamidine cyclo-ligase
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus
J.Biochem., 2015
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
2ZDC
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BU of 2zdc by Molmil
Crystal structure of dUTPase from Sulfolobus tokodaii
Descriptor: 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION
Authors:Kanagawa, M, Baba S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-21
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of dUTPase from Sulfolobus tokodaii
To be Published
3AW8
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BU of 3aw8 by Molmil
Crystal structure of N5-carboxyaminoimidazole ribonucleotide synthetase from Thermus thermophilus HB8
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Phosphoribosylaminoimidazole carboxylase, ...
Authors:Okada, K, Tsunoda, S, Taka, H, Baba, S, Kanagawa, M, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-03-15
Release date:2012-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of N5-carboxyaminoimidazole ribonucleotide synthetase, PurK, from thermophilic bacteria
To be Published
2ZW2
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BU of 2zw2 by Molmil
Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS)
Descriptor: GLYCEROL, Putative uncharacterized protein STS178
Authors:Suzuki, S, Tamura, S, Okada, K, Baba, S, Kumasaka, T, Nakagawa, N, Masui, R, Kuramitsu, S, Sampei, G, Kawai, G.
Deposit date:2008-11-27
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS)
To be Published
3AX6
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BU of 3ax6 by Molmil
Crystal structure of N5-carboxyaminoimidazole ribonucleotide synthetase from Thermotoga maritima
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Phosphoribosylaminoimidazole carboxylase, ATPase subunit
Authors:Miyazawa, R, Kanagawa, M, Baba, S, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-03-30
Release date:2012-04-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of N5-carboxyaminoimidazole ribonucleotide synthetase, PurK, from thermophilic bacteria
To be Published
3ACC
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BU of 3acc by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with GMP from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-MONOPHOSPHATE, Hypoxanthine-guanine phosphoribosyltransferase
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
3ACB
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BU of 3acb by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
2Z00
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BU of 2z00 by Molmil
Crystal structure of dihydroorotase from Thermus thermophilus
Descriptor: Dihydroorotase, ZINC ION
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of dihydroorotase from Thermus thermophilus
To be Published
2YWW
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BU of 2yww by Molmil
Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Aspartate carbamoyltransferase regulatory chain, ZINC ION
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
To be Published
2YZJ
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BU of 2yzj by Molmil
Crystal structure of dCTP deaminase from Sulfolobus tokodaii
Descriptor: 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-DIPHOSPHATE, ...
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of dCTP deaminase from Sulfolobus tokodaii
To be Published
2Z04
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BU of 2z04 by Molmil
Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus
Descriptor: Phosphoribosylaminoimidazole carboxylase ATPase subunit, SULFATE ION
Authors:Okada, K, Tamura, S, Baba, S, Kanagawa, M, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus
To be Published
7FJ0
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BU of 7fj0 by Molmil
Interaction between a fluoroquinolone derivative and RNAs with a single bulge
Descriptor: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*GP*AP*UP*CP*C)-3')
Authors:Nagano, K, Kamimura, T, Kawai, G.
Deposit date:2021-08-02
Release date:2021-12-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022
7FHI
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BU of 7fhi by Molmil
Interaction between a fluoroquinolone derivative and RNAs with a single bulge
Descriptor: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*CP*AP*UP*CP*C)-3')
Authors:Nagano, K, Kamimura, T, Kawai, G.
Deposit date:2021-07-29
Release date:2021-12-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022
7FGT
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BU of 7fgt by Molmil
Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
Descriptor: DNA (5'-D(*AP*AP*GP*AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*CP*TP*T)-3'), ~{N}-[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]-1-methyl-4-[3-[[1-methyl-4-[[1-methyl-4-[3-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazole-2-carboxamide
Authors:Takase, N, Kawai, G, Igarashi, W, Katagiri, T.
Deposit date:2021-07-28
Release date:2022-08-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
To be published
7EXY
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BU of 7exy by Molmil
T-hairpin structure found in the RNA element involved in the piRNA biogenesis
Descriptor: RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3')
Authors:Takase, N, Kawai, G.
Deposit date:2021-05-29
Release date:2022-03-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:T-hairpin structure found in the RNA element involved in piRNA biogenesis.
Rna, 28, 2022
7DD4
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BU of 7dd4 by Molmil
Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA
Descriptor: RNA (36-MER)
Authors:Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G.
Deposit date:2020-10-27
Release date:2021-06-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Sci Rep, 11, 2021
2F87
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BU of 2f87 by Molmil
Solution structure of a GAAG tetraloop in SRP RNA from Pyrococcus furiosus
Descriptor: SRP RNA
Authors:Okada, K, Takahashi, M, Sakamoto, T, Nakamura, K, Kanai, A, Kawai, G
Deposit date:2005-12-02
Release date:2006-08-08
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of a GAAG tetraloop in helix 6 of SRP RNA from Pyrococcus furiosus
Nucleosides Nucleotides Nucleic Acids, 25, 2006
2DGB
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BU of 2dgb by Molmil
Structure of Thermus thermophilus PurS in the P21 Form
Descriptor: hypothetical protein PurS
Authors:Yanai, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-10
Release date:2006-09-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be published
4P6A
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BU of 4p6a by Molmil
Crystal structure of a potent anti-HIV lectin actinohivin in complex with alpha-1,2-mannotriose
Descriptor: Actinohivin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Zhang, F, Hoque, M.M, Suzuki, K, Tsunoda, M, Naomi, O, Tanaka, H, Takenaka, A.
Deposit date:2014-03-23
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:The characteristic structure of anti-HIV actinohivin in complex with three HMTG D1 chains of HIV-gp120.
Chembiochem, 15, 2014
5B4V
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BU of 5b4v by Molmil
Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and an inhibitor methylmalonate
Descriptor: 3-hydroxybutyrate dehydrogenase, CHLORIDE ION, METHYLMALONIC ACID, ...
Authors:Kanazawa, H, Tsunoda, M, Hoque, M.M, Suzuki, K, Yamamoto, T, Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016

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