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7CT3
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BU of 7ct3 by Molmil
Crystal Structure of MglC from Myxococcus xanthus
Descriptor: Mutual gliding motility protein C (MglC), SODIUM ION
Authors:Thakur, K.G, Kapoor, S, Kodesia, A.
Deposit date:2020-08-17
Release date:2021-01-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural characterization of Myxococcus xanthus MglC, a component of the polarity control system, and its interactions with its paralog MglB.
J.Biol.Chem., 296, 2021
7CY1
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BU of 7cy1 by Molmil
Crystal Structure of MglC from Myxococcus xanthus
Descriptor: Mutual gliding motility protein C, SODIUM ION
Authors:Thakur, K.G, Kapoor, S, Kodesia, A.
Deposit date:2020-09-03
Release date:2021-01-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural characterization of Myxococcus xanthus MglC, a component of the polarity control system, and its interactions with its paralog MglB.
J.Biol.Chem., 2021
8U5F
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BU of 8u5f by Molmil
Crystal Structure of Trypsinized Clostridium perfringens Enterotoxin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Heat-labile enterotoxin B chain, ...
Authors:Kapoor, S, Ogbu, C.P, Vecchio, A.J.
Deposit date:2023-09-12
Release date:2023-09-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Basis of Clostridium perfringens Enterotoxin Activation and Oligomerization by Trypsin.
Toxins, 15, 2023
8U5E
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BU of 8u5e by Molmil
Crystal Structure of C-terminal domain of Clostridium perfringens Enterotoxin in Space Group P 21 21 21
Descriptor: ACETATE ION, GLYCEROL, Heat-labile enterotoxin B chain, ...
Authors:Kapoor, S, Vecchio, A.J.
Deposit date:2023-09-12
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis of Clostridium perfringens Enterotoxin Activation and Oligomerization by Trypsin.
Toxins, 15, 2023
8U5D
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BU of 8u5d by Molmil
Crystal Structure of C-terminal domain of Clostridium perfringens Enterotoxin in Space Group P 41 21 2
Descriptor: ACETATE ION, GLYCEROL, Heat-labile enterotoxin B chain, ...
Authors:Kapoor, S, Vecchio, A.J.
Deposit date:2023-09-12
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Clostridium perfringens Enterotoxin Activation and Oligomerization by Trypsin.
Toxins, 15, 2023
7XQC
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BU of 7xqc by Molmil
Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP)
Descriptor: DI(HYDROXYETHYL)ETHER, Fusion protein of Maltose-binding periplasmic protein and RNA-binding protein KhpA
Authors:Thakur, K.G, Singh, A, Kapoor, S, Deep, A.
Deposit date:2022-05-07
Release date:2023-05-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP)
To Be Published
4QGS
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BU of 4qgs by Molmil
Substrate and cofactor-free form of the Aldehyde Reductase YqhD from E. coli.
Descriptor: Alcohol dehydrogenase YqhD, CHLORIDE ION, ZINC ION
Authors:LaMattina, J.W, Kapoor, S, Lanzilotta, W.N.
Deposit date:2014-05-24
Release date:2015-05-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Open form of E. coli YqhD
To be Published
5ZFR
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BU of 5zfr by Molmil
Crystal structure of PilB, an extension ATPase motor of Type IV pilus, from Geobacter sulfurreducens
Descriptor: PHOSPHATE ION, Type IV pilus biogenesis ATPase PilB, ZINC ION
Authors:Thakur, K.G, Solanki, V, Kapoor, S.
Deposit date:2018-03-06
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into the mechanism of Type IVa pilus extension and retraction ATPase motors
FEBS J., 285, 2018
5I2G
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BU of 5i2g by Molmil
1,2-propanediol Dehydration in Roseburia inulinivorans; Structural Basis for Substrate and Enantiomer Selectivity
Descriptor: Diol dehydratase, S-1,2-PROPANEDIOL
Authors:LaMattina, J.W, Reitzer, P, Kapoor, S, Galzerani, F, Koch, D.J, Gouvea, I.E, Lanzilotta, W.N.
Deposit date:2016-02-08
Release date:2016-06-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:1,2-Propanediol Dehydration in Roseburia inulinivorans: STRUCTURAL BASIS FOR SUBSTRATE AND ENANTIOMER SELECTIVITY.
J.Biol.Chem., 291, 2016
5ZFQ
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BU of 5zfq by Molmil
Crystal structure of PilT-4, a retraction ATPase motor of Type IV pilus , from Geobacter sulfurreducens
Descriptor: Twitching motility pilus retraction protein
Authors:Thakur, K.G, Kapoor, S, Solanki, V.
Deposit date:2018-03-06
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the mechanism of Type IVa pilus extension and retraction ATPase motors
FEBS J., 285, 2018
5I2A
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BU of 5i2a by Molmil
1,2-propanediol Dehydration in Roseburia inulinivorans; Structural Basis for Substrate and Enantiomer Selectivity
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Diol-dehydratase
Authors:LaMattina, J.W, Reitzer, P, Kapoor, S, Galzerani, F, Koch, D.J, Gouvea, I.E, Lanzilotta, W.N.
Deposit date:2016-02-08
Release date:2016-06-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:1,2-Propanediol Dehydration in Roseburia inulinivorans: STRUCTURAL BASIS FOR SUBSTRATE AND ENANTIOMER SELECTIVITY.
J.Biol.Chem., 291, 2016
9MXI
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BU of 9mxi by Molmil
Crystal Structure of synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin
Descriptor: COP-2 antibody heavy chain, COP-2 antibody light chain, GLYCEROL, ...
Authors:Ogbu, C.P, Kapoor, S, Vecchio, A.J.
Deposit date:2025-01-20
Release date:2025-02-12
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin
To Be Published
8OYS
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BU of 8oys by Molmil
De novo designed TIM barrel fold TBF_24
Descriptor: CHLORIDE ION, De novo designed TIM-barrel
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OYY
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BU of 8oyy by Molmil
De novo designed soluble GPCR-like fold GLF_32
Descriptor: CHLORIDE ION, De novo designed soluble GPCR-like protein, POTASSIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OYV
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BU of 8oyv by Molmil
De novo designed Claudin fold CLF_4
Descriptor: De novo designed soluble Claudin
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OYX
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BU of 8oyx by Molmil
De novo designed soluble GPCR-like fold GLF_18
Descriptor: De novo designed soluble GPCR-like protein, PHOSPHATE ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OYW
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BU of 8oyw by Molmil
De novo designed rhomboid protease-like fold RPF_9
Descriptor: De novo designed soluble Rhomboid protease-like protein, SODIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
9BEI
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BU of 9bei by Molmil
Cryo-EM structure of synthetic claudin-4 complex with Clostridium perfringens enterotoxin C-terminal domain, sFab COP-2, and Nanobody
Descriptor: Anti-fab nanobody, COP-2 Fab Heavy chain, COP-2 Fab Light chain, ...
Authors:Vecchio, A.J.
Deposit date:2024-04-15
Release date:2024-04-24
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
9HAC
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BU of 9hac by Molmil
De novo designed BBF-14 beta barrel with computationally designed BBF-14_b4 binder
Descriptor: BBF-14, BBF-14_binder4, CHLORIDE ION, ...
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAE
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BU of 9hae by Molmil
Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Descriptor: DerF7_binder2, Mite allergen Der f 7, SODIUM ION
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAD
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BU of 9had by Molmil
Der f 21 dust mite allergen with computationally designed DerF21_b10 binder
Descriptor: DerF21_binder10, Mite allergen Der f 21.0101
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
9HAF
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BU of 9haf by Molmil
Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Descriptor: DerF7_binder2, Mite allergen Der f 7
Authors:Pacesa, M, Nickel, L, Correia, B.E.
Deposit date:2024-11-03
Release date:2024-12-18
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:BindCraft: one-shot design of functional protein binders.
Biorxiv, 2024
2VHY
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BU of 2vhy by Molmil
Crystal structure of apo L-alanine dehydrogenase from Mycobacterium tuberculosis
Descriptor: ALANINE DEHYDROGENASE
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008
2VHX
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BU of 2vhx by Molmil
Crystal structure of the ternary complex of L-alanine dehydrogenase from Mycobacterium tuberculosis with NAD+ and pyruvate
Descriptor: ALANINE DEHYDROGENASE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008
2VHZ
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BU of 2vhz by Molmil
Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the closed conformation
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALANINE DEHYDROGENASE
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008

 

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