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3HYJ
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BU of 3hyj by Molmil
Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA
分子名称: CHLORIDE ION, GLYCEROL, Protein DUF199/WhiA, ...
著者Kaiser, B.K, Clifton, M.C, Shen, B.W, Stoddard, B.L.
登録日2009-06-22
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The structure of a bacterial DUF199/WhiA protein: domestication of an invasive endonuclease.
Structure, 17, 2009
3HYI
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BU of 3hyi by Molmil
Crystal structure of full-length DUF199/WhiA from Thermatoga maritima
分子名称: GLYCEROL, Protein DUF199/WhiA, SODIUM ION
著者Kaiser, B.K, Clifton, M.C, Shen, B.W, Stoddard, B.L.
登録日2009-06-22
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献The structure of a bacterial DUF199/WhiA protein: domestication of an invasive endonuclease
Structure, 17, 2009
3CII
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BU of 3cii by Molmil
Structure of NKG2A/CD94 bound to HLA-E
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen peptide, HLA class I histocompatibility antigen, ...
著者Strong, R.K, Kaiser, B.K, Pizarro, J.C.
登録日2008-03-11
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.41 Å)
主引用文献Structural basis for NKG2A/CD94 recognition of HLA-E.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4YIS
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BU of 4yis by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-CpaMI Bound to Uncleaved DNA
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA (28-MER), ...
著者Hallinan, J.P, Kaiser, B.K, Stoddard, B.L.
登録日2015-03-02
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4YHX
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BU of 4yhx by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-GpeMI Bound to Uncleaved DNA
分子名称: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Hallinan, J.P, Kaiser, B.K, Stoddard, B.L.
登録日2015-02-27
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
5E63
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BU of 5e63 by Molmil
K262A mutant of I-SmaMI
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-METHOXYETHANOL, DNA (5'-D(P*CP*AP*GP*GP*TP*GP*TP*AP*CP*G)-3'), ...
著者Shen, B, Stoddard, B.
登録日2015-10-09
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.
J.Mol.Biol., 428, 2016
5E5P
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BU of 5e5p by Molmil
Wild type I-SmaMI in the space group of C121
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, I-SmaMI LAGLIDADG meganuclease
著者Shen, B.W.
登録日2015-10-09
公開日2016-01-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.
J.Mol.Biol., 428, 2016
5E5S
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BU of 5e5s by Molmil
I-SmaMI K103A mutant
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Bottom strand DNA, DNA (5'-D(P*CP*AP*GP*GP*TP*GP*TP*AP*CP*G)-3'), ...
著者Shen, B.W.
登録日2015-10-09
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.
J.Mol.Biol., 428, 2016
5E5O
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BU of 5e5o by Molmil
I-SmaMI bound to uncleaved DNA target in the presence of Calcium ions
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA (25-MER), ...
著者Shen, B.W.
登録日2015-10-08
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.
J.Mol.Biol., 428, 2016
5E67
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BU of 5e67 by Molmil
K103A/K262A double mutant of I-SmaMI
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-METHOXYETHANOL, DNA bottom strand, ...
著者Shen, B.W, Stoddard, B.
登録日2015-10-09
公開日2016-01-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.
J.Mol.Biol., 428, 2016
5ESP
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BU of 5esp by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-PanMI with coordinated Calcium ions
分子名称: CALCIUM ION, DNA (27-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-11-16
公開日2016-03-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.995 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
7T8L
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BU of 7t8l by Molmil
BrxR from Acinetobacter BREX type I phage restriction system
分子名称: 1,2-ETHANEDIOL, BrxR, CHLORIDE ION
著者Doyle, L, Kaiser, B, Stoddard, B.
登録日2021-12-16
公開日2022-05-18
最終更新日2022-06-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system.
Nucleic Acids Res., 50, 2022
7T8K
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BU of 7t8k by Molmil
BrxR from Acinetobacter BREX type I phage restriction system bound to DNA
分子名称: 1,2-ETHANEDIOL, BrxR, CHLORIDE ION, ...
著者Doyle, L, Kaiser, B, Stoddard, B.
登録日2021-12-16
公開日2022-05-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system.
Nucleic Acids Res., 50, 2022
3U0D
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BU of 3u0d by Molmil
The structure of human Siderocalin bound to the bacterial siderophore 2,3-DHBA
分子名称: 2,3-DIHYDROXY-BENZOIC ACID, CHLORIDE ION, FE (III) ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-09-28
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
Plos One, 7, 2012
3U9P
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BU of 3u9p by Molmil
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
分子名称: Monoclonal Fab Fragment Heavy Chain, Monoclonal Fab Fragment Light Chain, Neutrophil gelatinase-associated lipocalin
著者Correnti, C, Strong, R.K.
登録日2011-10-19
公開日2013-05-01
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
Plos One, 7, 2012
8EIL
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BU of 8eil by Molmil
C-Terminal Domain of BrxL from Acinetobacter BREX type I phage restriction system
分子名称: MALONIC ACID, Protease Lon-related BREX system protein BrxL, SUCCINIC ACID
著者Doyle, L.A, Stoddard, B.L, Kaiser, B.
登録日2022-09-15
公開日2023-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure, substrate binding and activity of a unique AAA+ protein: the BrxL phage restriction factor.
Nucleic Acids Res., 51, 2023
4YIT
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BU of 4yit by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-AabMI Bound to Uncleaved DNA
分子名称: CALCIUM ION, DNA (25-MER), DNA (25MER), ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-02
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4Z20
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BU of 4z20 by Molmil
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTGT Central Four
分子名称: CALCIUM ION, DNA (26-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-27
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4Z1Z
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BU of 4z1z by Molmil
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTCT Central Four
分子名称: CALCIUM ION, DNA (28-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-27
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
7JTA
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BU of 7jta by Molmil
Crystal structure of a putative nuclease with anti-Cas9 activity from an uncultured Clostridia bacterium
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NITRATE ION, NTF2-like nuclease/anti-CRISPR
著者Werther, R, Forsberg, K.J, Stoddard, B.L.
登録日2020-08-17
公開日2021-09-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献The novel anti-CRISPR AcrIIA22 relieves DNA torsion in target plasmids and impairs SpyCas9 activity.
Plos Biol., 19, 2021
8EMH
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BU of 8emh by Molmil
CryoEM characterization of a unique AAA+ BrxL phage restriction factor
分子名称: DNA (63-MER), DNA (64-MER), Protease Lon-related BREX system protein BrxL
著者Shen, B.W, Stoddard, B.L.
登録日2022-09-27
公開日2023-02-01
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Structure, substrate binding and activity of a unique AAA+ protein: the BrxL phage restriction factor.
Nucleic Acids Res., 51, 2023
8EMC
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BU of 8emc by Molmil
CryoEM characterization of BrxL -- a unique AAA+ phage restriction Factor.
分子名称: Protease Lon-related BREX system protein BrxL
著者Shen, B.W, Stoddard, B.L.
登録日2022-09-27
公開日2023-02-01
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure, substrate binding and activity of a unique AAA+ protein: the BrxL phage restriction factor.
Nucleic Acids Res., 51, 2023

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