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1LWM
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BU of 1lwm by Molmil
Solution Structure of the Sequence-Non-Specific HMGB protein NHP6A
分子名称: NONHISTONE CHROMOSOMAL PROTEIN 6A
著者Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J.
登録日2002-05-31
公開日2002-10-16
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
J.Mol.Biol., 323, 2002
6DGB
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BU of 6dgb by Molmil
Crystal structure of the C-terminal catalytic domain of IS1535 TnpA, an IS607-like serine recombinase
分子名称: IS607 family transposase IS1535
著者Chen, W.Y, Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2018-05-17
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition.
Elife, 7, 2018
6DGC
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BU of 6dgc by Molmil
Crystal structure of the C-terminal catalytic domain of ISC1926 TnpA, an IS607-like serine recombinase
分子名称: ISC1926 TnpA C-terminal catalytic domain
著者Hancock, S.P, Kumar, P, Cascio, D, Johnson, R.C.
登録日2018-05-17
公開日2018-07-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition.
Elife, 7, 2018
6P0U
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BU of 6p0u by Molmil
Crystal structure of ternary DNA complex " FX(1-2)-2Xis" containing E. coli Fis and phage lambda Xis
分子名称: DNA (27-MER), FX1-2, DNA-binding protein Fis, ...
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2019-05-17
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Cooperative DNA binding by proteins through DNA shape complementarity.
Nucleic Acids Res., 47, 2019
6P0T
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BU of 6p0t by Molmil
Crystal structure of ternary DNA complex "FX(1-2)-1Xis" containing E. coli Fis and phage lambda Xis
分子名称: DNA (27-MER), FX1-2, DNA-binding protein Fis, ...
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2019-05-17
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.603 Å)
主引用文献Cooperative DNA binding by proteins through DNA shape complementarity.
Nucleic Acids Res., 47, 2019
6P0S
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BU of 6p0s by Molmil
Crystal structure of ternary DNA complex "FX2" containing E. coli Fis and phage lambda Xis
分子名称: DNA (27-MER), FX1-2, DNA-binding protein Fis, ...
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2019-05-17
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Cooperative DNA binding by proteins through DNA shape complementarity.
Nucleic Acids Res., 47, 2019
5E3L
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BU of 5e3l by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5E3M
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BU of 5e3m by Molmil
Crystal structure of Fis bound to 27bp DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Stella, S, Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-09
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.886 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5DTD
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BU of 5dtd by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-09-17
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5DS9
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BU of 5ds9 by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8A (AAATTAGTTTGAATTTTGAGCTAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-09-17
公開日2016-07-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.561 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5E3O
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BU of 5e3o by Molmil
Crystal structure of Fis bound to 27bp DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5E3N
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BU of 5e3n by Molmil
Crystal structure of Fis bound to 27bp DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-09
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
4FIS
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BU of 4fis by Molmil
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
分子名称: FACTOR FOR INVERSION STIMULATION (FIS)
著者Yuan, H.S, Finkel, S.E, Feng, J.-A, Johnson, R.C, Dickerson, R.E.
登録日1991-08-12
公開日1993-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
4IHX
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BU of 4ihx by Molmil
Crystal structure of Fis bound to 27 bp 2-Aminopurine substituted DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
分子名称: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2012-12-19
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
4IHV
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BU of 4ihv by Molmil
Crystal structure of Fis bound to 27 bp sequence DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
分子名称: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2012-12-19
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.716 Å)
主引用文献Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
4IHY
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BU of 4ihy by Molmil
Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)
分子名称: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2012-12-19
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
4IHW
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BU of 4ihw by Molmil
Crystal structure of Fis bound to 27 bp Inosine substituted DNA F28-dI (AAATTTGTTTGAICITTGAGCAAATTT)
分子名称: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2012-12-19
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
3FIS
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BU of 3fis by Molmil
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
分子名称: FACTOR FOR INVERSION STIMULATION (FIS)
著者Yuan, H.S, Finkel, S.E, Feng, J-A, Johnson, R.C, Dickerson, R.E.
登録日1991-08-12
公開日1993-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
2IEF
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BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
分子名称: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
著者Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
登録日2006-09-18
公開日2007-02-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2OG0
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BU of 2og0 by Molmil
Crystal Structure of the Lambda Xis-DNA complex
分子名称: 5'-D(*AP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*TP*AP*TP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*T)-3', Excisionase
著者Papagiannis, C.V, Sam, M.D, Abbani, M.A, Cascio, D, Yoo, D, Clubb, R.T, Johnson, R.C.
登録日2007-01-04
公開日2007-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Fis targets assembly of the xis nucleoprotein filament to promote excisive recombination by phage lambda.
J.Mol.Biol., 367, 2007
1IJW
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BU of 1ijw by Molmil
Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*(CBR)P*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-04-30
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1HCR
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BU of 1hcr by Molmil
HIN RECOMBINASE BOUND TO DNA: THE ORIGIN OF SPECIFICITY IN MAJOR AND MINOR GROOVE INTERACTIONS
分子名称: DNA (5'-D(*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3'), PROTEIN (HIN RECOMBINASE)
著者Feng, J.-A, Johnson, R.C, Dickerson, R.E.
登録日1993-12-17
公開日1994-04-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Hin recombinase bound to DNA: the origin of specificity in major and minor groove interactions.
Science, 263, 1994
1JJ8
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BU of 1jj8 by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*(5IT)P*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-03
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKP
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BU of 1jkp by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*CP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*GP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-13
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKQ
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BU of 1jkq by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*AP*TP*AP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*TP*AP*TP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-13
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002

 

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