Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2VNN
DownloadVisualize
BU of 2vnn by Molmil
Human BACE-1 in complex with 7-ethyl-N-((1S,2R)-2-hydroxy-1-(phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino)propyl)-1- methyl-3,4-dihydro-1H-(1,2,5)thiadiazepino(3,4,5-hi)indole-9- carboxamide 2,2-dioxide
分子名称: BETA-SECRETASE 1, N-[(1S,2R)-1-benzyl-2-hydroxy-3-{[3-(trifluoromethyl)benzyl]amino}propyl]-7-ethyl-1-methyl-3,4-dihydro-1H-[1,2,5]thiadiazepino[3,4,5-hi]indole-9-carboxamide 2,2-dioxide
著者Charrier, N, Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, East, P, Hawkins, J, Howes, C, Hussain, I, Jeffrey, P, Maile, G, Matico, R, Mosley, J, Naylor, A, OBrien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
登録日2008-02-05
公開日2008-05-20
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Second Generation of Hydroxyethylamine Bace-1 Inhibitors: Optimizing Potency and Oral Bioavailability.
J.Med.Chem., 51, 2008
2VNM
DownloadVisualize
BU of 2vnm by Molmil
Human BACE-1 in complex with 3-(1,1-dioxidotetrahydro-2H-1,2-thiazin- 2-yl)-5-(ethylamino)-N-((1S,2R)-2-hydroxy-1-(phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino)propyl)benzamide
分子名称: BETA-SECRETASE 1, N-[(1S,2R)-1-benzyl-2-hydroxy-3-{[3-(trifluoromethyl)benzyl]amino}propyl]-3-(1,1-dioxido-1,2-thiazinan-2-yl)-5-(ethylamino)benzamide
著者Charrier, N, Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, East, P, Hawkins, J, Howes, C, Hussain, I, Jeffrey, P, Maile, G, Matico, R, Mosley, J, Naylor, A, OBrien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
登録日2008-02-05
公開日2008-05-20
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Second Generation of Hydroxyethylamine Bace-1 Inhibitors: Optimizing Potency and Oral Bioavailability.
J.Med.Chem., 51, 2008
3H4M
DownloadVisualize
BU of 3h4m by Molmil
AAA ATPase domain of the proteasome- activating nucleotidase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Proteasome-activating nucleotidase
著者Jeffrey, P, Zhang, F, Hu, M, Tian, G, Zhang, P, Finley, D, Shi, Y.
登録日2009-04-20
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.106 Å)
主引用文献Structural Insights into the Regulatory Particle of the Proteasome from Methanocaldococcus jannaschii.
Mol.Cell, 34, 2009
7Z8O
DownloadVisualize
BU of 7z8o by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
分子名称: 2,4,6-tris(chloromethyl)-1,3,5-triazine, GLYCEROL, Spike protein S1, ...
著者Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
登録日2022-03-18
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
8AAA
DownloadVisualize
BU of 8aaa by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
分子名称: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Spike protein S1, Stapled peptide
著者Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
登録日2022-06-30
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
6Z7B
DownloadVisualize
BU of 6z7b by Molmil
Variant Surface Glycoprotein VSGsur bound to suramin
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Variant surface glycoprotein Sur, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zeelen, J.P, Straaten van, M, Stebbins, C.E, Jeffrey, P.
登録日2020-05-30
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of trypanosome coat protein VSGsur and function in suramin resistance.
Nat Microbiol, 6, 2021
4C66
DownloadVisualize
BU of 4c66 by Molmil
Discovery of Epigenetic Regulator I-BET762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the BET Bromodomains
分子名称: 4-(2-chlorophenyl)-2-ethyl-9-methyl-6,8-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium, BROMODOMAIN-CONTAINING PROTEIN 4
著者Chung, C, Mirguet, O.
登録日2013-09-17
公開日2013-10-02
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Discovery of Epigenetic Regulator I-Bet762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the Bet Bromodomains.
J.Med.Chem., 56, 2013
4C67
DownloadVisualize
BU of 4c67 by Molmil
Discovery of Epigenetic Regulator I-BET762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the BET Bromodomains
分子名称: 1,2-ETHANEDIOL, 13-methyl-7-phenyl-3-thia-1,8,11,12-tetraazatricyclo trideca-2(6),4,7,10,12-pentaene, BROMODOMAIN-CONTAINING PROTEIN 4
著者Chung, C, Mirguet, O.
登録日2013-09-17
公開日2013-10-02
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of Epigenetic Regulator I-Bet762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the Bet Bromodomains.
J.Med.Chem., 56, 2013
1TSR
DownloadVisualize
BU of 1tsr by Molmil
P53 CORE DOMAIN IN COMPLEX WITH DNA
分子名称: DNA (5'-D(*AP*TP*AP*AP*TP*TP*GP*GP*GP*CP*AP*AP*GP*TP*CP*TP*A P*GP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*CP*CP*TP*AP*GP*AP*CP*TP*TP*GP*CP*CP*CP*A P*AP*TP*TP*A)-3'), PROTEIN (P53 TUMOR SUPPRESSOR), ...
著者Cho, Y, Gorina, S, Jeffrey, P, Pavletich, N.
登録日1995-07-28
公開日1996-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a p53 tumor suppressor-DNA complex: understanding tumorigenic mutations.
Science, 265, 1994
3QP4
DownloadVisualize
BU of 3qp4 by Molmil
Crystal structure of CviR ligand-binding domain bound to C10-HSL
分子名称: CviR transcriptional regulator, N-[(3S)-2-oxotetrahydrofuran-3-yl]decanamide
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3QP2
DownloadVisualize
BU of 3qp2 by Molmil
Crystal structure of CviR ligand-binding domain bound to C8-HSL
分子名称: CviR transcriptional regulator, N-(2-OXOTETRAHYDROFURAN-3-YL)OCTANAMIDE
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.638 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3QP8
DownloadVisualize
BU of 3qp8 by Molmil
Crystal structure of CviR (Chromobacterium violaceum 12472) ligand-binding domain bound to C10-HSL
分子名称: CviR transcriptional regulator, N-[(3S)-2-oxotetrahydrofuran-3-yl]decanamide
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3QP5
DownloadVisualize
BU of 3qp5 by Molmil
Crystal structure of CviR bound to antagonist chlorolactone (CL)
分子名称: 4-(4-chlorophenoxy)-N-[(3S)-2-oxotetrahydrofuran-3-yl]butanamide, CviR transcriptional regulator
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.249 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3QP6
DownloadVisualize
BU of 3qp6 by Molmil
Crystal structure of CviR (Chromobacterium violaceum 12472) bound to C6-HSL
分子名称: CviR transcriptional regulator, N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3QP1
DownloadVisualize
BU of 3qp1 by Molmil
Crystal structure of CviR ligand-binding domain bound to the native ligand C6-HSL
分子名称: CviR transcriptional regulator, N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
3ZYU
DownloadVisualize
BU of 3zyu by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with I-BET151(GSK1210151A)
分子名称: 1,2-ETHANEDIOL, 7-(3,5-DIMETHYL-1,2-OXAZOL-4-YL)-8-METHOXY-1-[(1R)-1-(PYRIDIN-2-YL)ETHYL]-1H,2H,3H-IMIDAZO[4,5-C]QUINOLIN-2-ONE, BROMODOMAIN-CONTAINING PROTEIN 4
著者Chung, C.W, Mirguet, O.
登録日2011-08-25
公開日2011-11-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of Bet Recruitment to Chromatin as an Effective Treatment for Mll-Fusion Leukaemia.
Nature, 478, 2011
4G0F
DownloadVisualize
BU of 4g0f by Molmil
Crystal structure of the complex of a human telomeric repeat G-quadruplex and N-methyl mesoporphyrin IX (P6)
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN, POTASSIUM ION
著者Nicoludis, J.M, Miller, S.T, Jeffrey, P, Lawton, T.J, Rosenzweig, A.C, Yatsunyk, L.A.
登録日2012-07-09
公開日2012-12-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Optimized End-Stacking Provides Specificity of N-Methyl Mesoporphyrin IX for Human Telomeric G-Quadruplex DNA.
J.Am.Chem.Soc., 134, 2012
4FXM
DownloadVisualize
BU of 4fxm by Molmil
Crystal structure of the complex of a human telomeric repeat G-quadruplex and N-methyl mesoporphyrin IX (P21212)
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN, POTASSIUM ION
著者Nicoludis, J.M, Miller, S.T, Jeffrey, P, Lawton, T.J, Rosenzweig, A.C, Yatsunyk, L.A.
登録日2012-07-03
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Optimized End-Stacking Provides Specificity of N-Methyl Mesoporphyrin IX for Human Telomeric G-Quadruplex DNA.
J.Am.Chem.Soc., 134, 2012
6MYW
DownloadVisualize
BU of 6myw by Molmil
Gluconobacter Ene-Reductase (GluER) mutant - T36A
分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Garfinkle, S.E, Jeffrey, P, Hyster, T.K.
登録日2018-11-02
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.157 Å)
主引用文献Photoexcitation of flavoenzymes enables a stereoselective radical cyclization.
Science, 364, 2019
6O08
DownloadVisualize
BU of 6o08 by Molmil
Gluconobacter Ene-Reductase (GluER)
分子名称: ACETATE ION, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
著者Garfinkle, S.E, Jeffrey, P, Hyster, T.K.
登録日2019-02-15
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Photoexcitation of flavoenzymes enables a stereoselective radical cyclization.
Science, 364, 2019
7TNB
DownloadVisualize
BU of 7tnb by Molmil
Caulobacter segnis arene reductase (CSAR) - WT
分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase/NADH oxidase, ...
著者Garfinkle, S.E, Jeffrey, P, Hyster, T.K.
登録日2022-01-20
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献An asymmetric sp 3 -sp 3 cross-electrophile coupling using 'ene'-reductases.
Nature, 610, 2022

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon