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1Q9P
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Solution structure of the mature HIV-1 protease monomer
分子名称: HIV-1 Protease
著者Ishima, R, Torchia, D.A, Lynch, S.M, Gronenborn, A.M, Louis, J.M.
登録日2003-08-25
公開日2004-03-02
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Solution structure of the mature HIV-1 protease monomer: Insight into the tertiary fold and stability of a precursor
J.Biol.Chem., 278, 2003
1BXD
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BU of 1bxd by Molmil
NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ))
著者Tanaka, T, Saha, S.K, Tomomori, C, Ishima, R, Liu, D, Tong, K.I, Park, H, Dutta, R, Qin, L, Swindells, M.B, Yamazaki, T, Ono, A.M, Kainosho, M, Inouye, M, Ikura, M.
登録日1998-10-02
公開日1999-10-02
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
1GUR
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BU of 1gur by Molmil
GURMARIN, A SWEET TASTE-SUPPRESSING POLYPEPTIDE, NMR, 10 STRUCTURES
分子名称: GURMARIN
著者Arai, K, Ishima, R, Morikawa, S, Imoto, T, Yoshimura, S, Aimoto, S, Akasaka, K.
登録日1996-03-12
公開日1996-08-01
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of gurmarin, a sweet taste-suppressing polypeptide.
J.Biomol.NMR, 5, 1995
1JOY
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BU of 1joy by Molmil
SOLUTION STRUCTURE OF THE HOMODIMERIC DOMAIN OF ENVZ FROM ESCHERICHIA COLI BY MULTI-DIMENSIONAL NMR.
分子名称: PROTEIN (ENVZ_ECOLI)
著者Tomomori, C, Tanaka, T, Dutta, R, Park, H, Saha, S.K, Zhu, Y, Ishima, R, Liu, D, Tong, K.I, Kurokawa, H, Qian, H, Inouye, M, Ikura, M.
登録日1998-12-28
公開日2000-01-12
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the homodimeric core domain of Escherichia coli histidine kinase EnvZ.
Nat.Struct.Biol., 6, 1999
1JSA
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BU of 1jsa by Molmil
MYRISTOYLATED RECOVERIN WITH TWO CALCIUMS BOUND, NMR, 24 STRUCTURES
分子名称: CALCIUM ION, MYRISTIC ACID, RECOVERIN
著者Ames, J.B, Ishima, R, Tanaka, T, Gordon, J.I, Stryer, L, Ikura, M.
登録日1997-06-04
公開日1997-10-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Molecular mechanics of calcium-myristoyl switches.
Nature, 389, 1997
1TBA
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BU of 1tba by Molmil
SOLUTION STRUCTURE OF A TBP-TAFII230 COMPLEX: PROTEIN MIMICRY OF THE MINOR GROOVE SURFACE OF THE TATA BOX UNWOUND BY TBP, NMR, 25 STRUCTURES
分子名称: TRANSCRIPTION INITIATION FACTOR IID 230K CHAIN, TRANSCRIPTION INITIATION FACTOR TFIID
著者Liu, D, Ishima, R, Tong, K.I, Bagby, S, Kokubo, T, Muhandiram, D.R, Kay, L.E, Nakatani, Y, Ikura, M.
登録日1998-08-16
公開日1999-08-16
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of a TBP-TAF(II)230 complex: protein mimicry of the minor groove surface of the TATA box unwound by TBP.
Cell(Cambridge,Mass.), 94, 1998
3JVY
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HIV-1 Protease Mutant G86A with DARUNAVIR
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, Gag-Pol polyprotein, ...
著者Tie, Y, Weber, I.T.
登録日2009-09-17
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
3JVW
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HIV-1 Protease Mutant G86A with symmetric inhibitor DMP323
分子名称: Gag-Pol polyprotein, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHEN YLMETHYL)]-2H-1,3-DIAZEPINONE
著者Tie, Y, Weber, I.T.
登録日2009-09-17
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
3JW2
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HIV-1 Protease Mutant G86S with DARUNAVIR
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, Gag-Pol polyprotein, ...
著者Tie, Y, Weber, I.T.
登録日2009-09-17
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
1C4E
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GURMARIN FROM GYMNEMA SYLVESTRE
分子名称: PROTEIN (GURMARIN)
著者Fletcher, J.I, Dingley, A.J, King, G.F.
登録日1999-07-27
公開日1999-08-27
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献High-resolution solution structure of gurmarin, a sweet-taste-suppressing plant polypeptide.
Eur.J.Biochem., 264, 1999
3BVB
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BU of 3bvb by Molmil
Cystal structure of HIV-1 Active Site Mutant D25N and inhibitor Darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, GLYCEROL, ...
著者Liu, F, Weber, I.T.
登録日2008-01-05
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
3BVA
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BU of 3bva by Molmil
Cystal structure of HIV-1 Active Site Mutant D25N and p2-NC analog inhibitor
分子名称: GLYCEROL, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, Protease (Retropepsin)
著者Liu, F, Weber, I.T.
登録日2008-01-05
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
5UV5
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BU of 5uv5 by Molmil
Crystal Structure of a 2-Hydroxyisoquinoline-1,3-dione RNase H Active Site Inhibitor with Multiple Binding Modes to HIV Reverse Transcriptase
分子名称: 7-(furan-2-yl)-2-hydroxyisoquinoline-1,3(2H,4H)-dione, MANGANESE (II) ION, Reverse transcriptase/ribonuclease H, ...
著者Kirby, K.A, Sarafianos, S.G.
登録日2017-02-19
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A 2-Hydroxyisoquinoline-1,3-Dione Active-Site RNase H Inhibitor Binds in Multiple Modes to HIV-1 Reverse Transcriptase.
Antimicrob. Agents Chemother., 61, 2017
4DIR
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BU of 4dir by Molmil
2.6 Angstrom X-ray structure of human CA(2+)-S100A5
分子名称: CALCIUM ION, Protein S100-A5
著者Liriano, M.A, Toth, E.A, Weber, D.J.
登録日2012-01-31
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Target-binding to S100A5 changes Ca(2+)-binding affinity and dynamics.
To be Published
3RLZ
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BU of 3rlz by Molmil
2.0 Angstrom X-ray structure of bovine Ca(2+)-S100B D63N
分子名称: CALCIUM ION, Protein S100-B
著者Liriano, M.A, Weber, D.J.
登録日2011-04-20
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
2L4J
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BU of 2l4j by Molmil
Yap ww2
分子名称: Yes-associated protein 2 (YAP2)
著者Webb, C, Upadhyay, A, Furutani-Seiki, M, Bagby, S.
登録日2010-10-07
公開日2010-11-03
最終更新日2020-02-05
実験手法SOLUTION NMR
主引用文献Structural Features and Ligand Binding Properties of Tandem WW Domains from YAP and TAZ, Nuclear Effectors of the Hippo Pathway.
Biochemistry, 50, 2011
3RM1
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BU of 3rm1 by Molmil
1.24 Angstrom X-ray structure of bovine TRTK12-Ca(2+)-S100B D63N
分子名称: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-B
著者Liriano, M.A, Weber, D.J.
登録日2011-04-20
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
1TFB
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BU of 1tfb by Molmil
NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
分子名称: TFIIB
著者Bagby, S, Ikura, M.
登録日1996-11-14
公開日1997-03-12
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
6FB4
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human KIBRA C2 domain mutant C771A
分子名称: GLYCEROL, PHOSPHATE ION, Protein KIBRA
著者Crennell, S.J, Posner, M.G, Bagby, S.
登録日2017-12-18
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.415631 Å)
主引用文献Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FJC
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BU of 6fjc by Molmil
Human KIBRA C2 domain mutant C771A in complex with phosphatidylinositol 3,4,5-trisphosphate
分子名称: (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, GLYCEROL, Protein KIBRA, ...
著者Crennell, S.J, Posner, M.G, Bagby, S.
登録日2018-01-22
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FJD
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Human KIBRA C2 domain mutant C771A in complex with phosphatidylinositol 4,5-bisphosphate
分子名称: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, GLYCEROL, Protein KIBRA, ...
著者Crennell, S.J, Posner, M.G, Bagby, S.
登録日2018-01-22
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.898 Å)
主引用文献Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FD0
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Human KIBRA C2 domain mutant M734I S735A
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Protein KIBRA
著者Crennell, S.J, Posner, M.G, Bagby, S.
登録日2017-12-21
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.64215851 Å)
主引用文献Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018

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