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6JPP
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BU of 6jpp by Molmil
Solution structure of ELMO1 RBD
Descriptor: Engulfment and cell motility protein 1
Authors:Tsuda, K, Kukimoto-Niino, M, Shirouzu, M.
Deposit date:2019-03-27
Release date:2020-04-01
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Targeting Ras-binding domain of ELMO1 by computational nanobody design.
Commun Biol, 6, 2023
8I5F
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BU of 8i5f by Molmil
Crystal structure of the DHR-2 domain of DOCK10 in complex with Cdc42 (T17N mutant)
Descriptor: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 10
Authors:Kukimoto-Niino, M, Mishima-Tsumagari, C, Fukui, Y, Yokoyama, S, Shirouzu, M.
Deposit date:2023-01-25
Release date:2023-03-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the dual GTPase specificity of the DOCK10 guanine nucleotide exchange factor.
Biochem.Biophys.Res.Commun., 653, 2023
7DM9
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BU of 7dm9 by Molmil
Crystal structure of FliM middle domain (51-229) from Vibro alginolyticus
Descriptor: Flagellar motor switch protein FliM
Authors:Takekawa, N, Homma, M, Imada, K.
Deposit date:2020-12-02
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:A slight bending of an alpha-helix in FliM creates a counterclockwise-locked structure of the flagellar motor in Vibrio.
J.Biochem., 170, 2021
7DMA
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BU of 7dma by Molmil
Crystal structure of FliM middle domain (46-231) with R49P substitution from Vibro alginolyticus
Descriptor: Flagellar motor switch protein FliM
Authors:Takekawa, N, Homma, M, Imada, K.
Deposit date:2020-12-03
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:A slight bending of an alpha-helix in FliM creates a counterclockwise-locked structure of the flagellar motor in Vibrio.
J.Biochem., 170, 2021
3A7K
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BU of 3a7k by Molmil
Crystal structure of halorhodopsin from Natronomonas pharaonis
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
Authors:Kouyama, T.
Deposit date:2009-09-27
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Light-Driven Chloride Pump Halorhodopsin from Natronomonas pharaonis.
J.Mol.Biol., 396, 2010
4FBZ
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BU of 4fbz by Molmil
Crystal structure of deltarhodopsin from Haloterrigena thermotolerans
Descriptor: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, BACTERIORUBERIN, ...
Authors:Kouyama, T.
Deposit date:2012-05-23
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of deltarhodopsin-3 from Haloterrigena thermotolerans
Proteins, 81, 2013
1MPG
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BU of 1mpg by Molmil
3-METHYLADENINE DNA GLYCOSYLASE II FROM ESCHERICHIA COLI
Descriptor: 3-METHYLADENINE DNA GLYCOSYLASE II, GLYCEROL
Authors:Labahn, J, Schaerer, O.D, Long, A, Ezaz-Nikpay, K, Verdine, G.L, Ellenberger, T.E.
Deposit date:1997-10-28
Release date:1998-01-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the excision repair of alkylation-damaged DNA.
Cell(Cambridge,Mass.), 86, 1996
3QBI
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BU of 3qbi by Molmil
Crystal structure of an anion-free yellow form of pharaonis halorhodopsin
Descriptor: BACTERIORUBERIN, Halorhodopsin, RETINAL, ...
Authors:Kouyama, T, Kanada, S.
Deposit date:2011-01-13
Release date:2011-08-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin
J.Mol.Biol., 413, 2011
3QBL
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BU of 3qbl by Molmil
Pharaonis halorhodopsin complexed with nitrate
Descriptor: BACTERIORUBERIN, Halorhodopsin, NITRATE ION, ...
Authors:Kouyama, T, Kanada, S.
Deposit date:2011-01-13
Release date:2011-08-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of anion-free blue and yellow forms of pharaonis halorhodopsin
To be Published
3QBK
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BU of 3qbk by Molmil
Bromide-bound form of pharaonis halorhodopsin
Descriptor: BACTERIORUBERIN, BROMIDE ION, Halorhodopsin, ...
Authors:Kouyama, T, Kanada, S.
Deposit date:2011-01-13
Release date:2011-08-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin
J.Mol.Biol., 413, 2011
3QBG
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BU of 3qbg by Molmil
Anion-free blue form of pharaonis halorhodopsin
Descriptor: BACTERIORUBERIN, Halorhodopsin, RETINAL, ...
Authors:Kouyama, T, Kanada, S.
Deposit date:2011-01-13
Release date:2011-08-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin
J.Mol.Biol., 413, 2011
4FWG
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BU of 4fwg by Molmil
Crystal structure of the Lon-like protease MtaLonC in complex with lactacystin
Descriptor: Omuralide, open form, PHOSPHATE ION, ...
Authors:Chang, C.I, Kuo, C.I, Huang, K.F.
Deposit date:2012-07-01
Release date:2013-06-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structures of an ATP-independent Lon-like protease and its complexes with covalent inhibitors
Acta Crystallogr.,Sect.D, 69, 2013
4FWD
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BU of 4fwd by Molmil
Crystal structure of the Lon-like protease MtaLonC in complex with bortezomib
Descriptor: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, PHOSPHATE ION, TTC1975 peptidase
Authors:Chang, C.I, Kuo, C.I, Huang, K.F.
Deposit date:2012-06-30
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of an ATP-independent Lon-like protease and its complexes with covalent inhibitors
Acta Crystallogr.,Sect.D, 69, 2013
4FWH
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BU of 4fwh by Molmil
Crystal structure of the Lon-like protease MtaLonC in complex with MG262
Descriptor: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-leucinamide, PHOSPHATE ION, TTC1975 peptidase
Authors:Chang, C.I, Kuo, C.I, Huang, K.F.
Deposit date:2012-07-01
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structures of an ATP-independent Lon-like protease and its complexes with covalent inhibitors
Acta Crystallogr.,Sect.D, 69, 2013
3WXQ
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BU of 3wxq by Molmil
Serial femtosecond X-ray structure of human fatty acid-binding protein type-3 (FABP3) in complex with stearic acid (C18:0) determined using X-ray free-electron laser at SACLA
Descriptor: Fatty acid-binding protein, heart, STEARIC ACID
Authors:Mizohata, E, Suzuki, M, Kakinouchi, K, Sugiyama, S, Murata, M, Sugahara, M, Nango, E, Tanaka, T, Tanaka, R, Tono, K, Song, C, Hatsui, T, Joti, Y, Yabashi, M, Iwata, S.
Deposit date:2014-08-04
Release date:2014-11-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
3WUM
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BU of 3wum by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nango, E, Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WUL
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BU of 3wul by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nango, E, Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXS
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BU of 3wxs by Molmil
Thaumatin structure determined by SPring-8 Angstrom Compact free electron Laser (SACLA)
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Nango, E, Sugahara, M, Mizohata, E, Tanaka, T, Tanaka, R, Suzuki, M, Mikami, B, Iwata, S.
Deposit date:2014-08-07
Release date:2014-11-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
3WXT
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BU of 3wxt by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nango, E, Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXU
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BU of 3wxu by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nango, E, Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3VHZ
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BU of 3vhz by Molmil
Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3VI0
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BU of 3vi0 by Molmil
Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3VVK
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BU of 3vvk by Molmil
An M-like Reaction State of the azide-bound purple form of pharaonis halorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, AZIDE ION, BACTERIORUBERIN, ...
Authors:Kouyama, T, Nakanishi, T.
Deposit date:2012-07-26
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Large deformation of helix F during the photoreaction cycle of Pharaonis halorhodopsin in complex with azide
Biophys.J., 104, 2013
1VGP
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BU of 1vgp by Molmil
Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7
Descriptor: 373aa long hypothetical citrate synthase
Authors:Murakami, M, Ihara, K, Kouyama, T.
Deposit date:2004-04-28
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Two Isozymes of Citrate Synthase from Sulfolobus tokodaii Strain 7.
Biochem Res Int, 2016, 2016
1VGM
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BU of 1vgm by Molmil
Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7
Descriptor: 378aa long hypothetical citrate synthase, GLYCEROL, SULFATE ION
Authors:Murakami, M, Ihara, K, Kouyama, T.
Deposit date:2004-04-27
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Two Isozymes of Citrate Synthase from Sulfolobus tokodaii Strain 7.
Biochem Res Int, 2016, 2016
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