6KBC
| Crystal structure of CghA with Sch210972 | 分子名称: | (2S)-3-[(2S,4E)-4-[[(1R,2S,4aR,6S,8R,8aS)-2-[(E)-but-2-en-2-yl]-6,8-dimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]-oxidanyl-methylidene]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]-2-methyl-2-oxidanyl-propanoic acid, CghA | 著者 | Hara, K, Hashimoto, H, Maeda, N, Sato, M, Watanabe, K. | 登録日 | 2019-06-24 | 公開日 | 2020-06-24 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase Nat Catal, 2021
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6KJI
| Crystal structure of PsoF with SAH | 分子名称: | Dual-functional monooxygenase/methyltransferase psoF, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2019-07-22 | 公開日 | 2019-09-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Functional and Structural Analyses oftrans C-Methyltransferase in Fungal Polyketide Biosynthesis. Biochemistry, 58, 2019
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6MR4
| Crystal structure of the Sth1 bromodomain from S.cerevisiae | 分子名称: | Nuclear protein STH1/NPS1 | 著者 | Seo, H.S, Hashimoto, H, Krolak, A, Debler, E.W, Blus, B.J. | 登録日 | 2018-10-11 | 公開日 | 2019-07-24 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | 主引用文献 | Substrate Affinity and Specificity of the ScSth1p Bromodomain Are Fine-Tuned for Versatile Histone Recognition. Structure, 27, 2019
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2CW7
| Crystal structure of intein homing endonuclease II | 分子名称: | Endonuclease PI-PkoII, SULFATE ION | 著者 | Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y. | 登録日 | 2005-06-17 | 公開日 | 2006-04-18 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1 Proteins, 63, 2006
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2CW8
| Crystal structure of intein homing endonuclease II | 分子名称: | Endonuclease PI-PkoII, GLYCEROL, SULFATE ION | 著者 | Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y. | 登録日 | 2005-06-17 | 公開日 | 2006-04-18 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1 Proteins, 63, 2006
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7CP7
| Crystal structure of FqzB, native proteins | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K. | 登録日 | 2020-08-06 | 公開日 | 2020-12-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis. Biochemistry, 59, 2020
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7CP6
| Crystal structure of FqzB | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase, ... | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K. | 登録日 | 2020-08-06 | 公開日 | 2020-12-30 | 最終更新日 | 2021-01-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis. Biochemistry, 59, 2020
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2CT9
| The crystal structure of calcineurin B homologous proein 1 (CHP1) | 分子名称: | CALCIUM ION, Calcium-binding protein p22 | 著者 | Naoe, Y, Arita, K, Hashimoto, H, Kanazawa, H, Sato, M, Shimizu, T. | 登録日 | 2005-05-23 | 公開日 | 2005-07-05 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural characterization of calcineurin B homologous protein 1 J.Biol.Chem., 280, 2005
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7YBD
| Crystal structure of sliding DNA clamp of Clostridioides difficile | 分子名称: | Beta sliding clamp, TRIETHYLENE GLYCOL | 著者 | Hishiki, A, Okazaki, S, Hara, K, Hashimoto, H. | 登録日 | 2022-06-29 | 公開日 | 2022-10-19 | 最終更新日 | 2023-01-11 | 実験手法 | X-RAY DIFFRACTION (2.13 Å) | 主引用文献 | Crystal structure of the sliding DNA clamp from the Gram-positive anaerobic bacterium Clostridioides difficile. J.Biochem., 173, 2022
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5YY3
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5YY2
| Crystal structure of AsqI with Zn | 分子名称: | Uncharacterized protein AsqI, ZINC ION | 著者 | Hara, K, Hashimoto, H, Kishimoto, S, Watanabe, K. | 登録日 | 2017-12-07 | 公開日 | 2018-08-01 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.91 Å) | 主引用文献 | Enzymatic one-step ring contraction for quinolone biosynthesis. Nat Commun, 9, 2018
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7V5N
| Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer | 分子名称: | 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*TP*GP*GP*TP*AP*GP*TP*TP*AP*CP*GP*TP*TP*CP*GP*C)-3'), IMIDAZOLE, ... | 著者 | Hishiki, A, Tong, J, Todoroki, K, Hashimoto, H. | 登録日 | 2021-08-17 | 公開日 | 2022-02-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Development of a DNA aptamer that binds to the complementarity-determining region of therapeutic monoclonal antibody and affinity improvement induced by pH-change for sensitive detection. Biosens.Bioelectron., 203, 2022
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3VLA
| Crystal structure of edgp | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, EDGP | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (0.95 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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3VLB
| Crystal structure of xeg-edgp | 分子名称: | EDGP, Xyloglucan-specific endo-beta-1,4-glucanase A | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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3VIR
| Crystal strcture of Swi5 from fission yeast | 分子名称: | Mating-type switching protein swi5, octyl beta-D-glucopyranoside | 著者 | Kuwabara, N, Yamada, N, Hashimoto, H, Sato, M, Iwasaki, H, Shimizu, T. | 登録日 | 2011-10-06 | 公開日 | 2012-08-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex Structure, 20, 2012
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3VL8
| Crystal structure of XEG | 分子名称: | SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase A | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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3VIQ
| Crystal structure of Swi5-Sfr1 complex from fission yeast | 分子名称: | GLYCEROL, Mating-type switching protein swi5, NITRATE ION, ... | 著者 | Kuwabara, N, Murayama, Y, Hashimoto, H, Kokabu, Y, Ikeguchi, M, Sato, M, Mayanagi, K, Tsutsui, Y, Iwasaki, H, Shimizu, T. | 登録日 | 2011-10-06 | 公開日 | 2012-08-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex Structure, 20, 2012
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3VL9
| Crystal structure of xeg-xyloglucan | 分子名称: | Xyloglucan-specific endo-beta-1,4-glucanase A, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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2DEX
| Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal peptide including Arg17 | 分子名称: | 10-mer peptide from histone H3, CALCIUM ION, Protein-arginine deiminase type IV, ... | 著者 | Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. | 登録日 | 2006-02-18 | 公開日 | 2006-04-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
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2DEW
| Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal tail including Arg8 | 分子名称: | 10-mer peptide from histone H3, CALCIUM ION, Protein-arginine deiminase type IV, ... | 著者 | Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. | 登録日 | 2006-02-18 | 公開日 | 2006-04-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
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2DEY
| Crystal structure of human peptidylarginine deiminase 4 in complex with histone H4 N-terminal tail including Arg3 | 分子名称: | 10-mer peptide from histone H4, CALCIUM ION, Protein-arginine deiminase type IV, ... | 著者 | Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. | 登録日 | 2006-02-18 | 公開日 | 2006-04-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
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2ZVK
| Crystal structure of PCNA in complex with DNA polymerase eta fragment | 分子名称: | DNA polymerase eta, Proliferating cell nuclear antigen | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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2ZFD
| The crystal structure of plant specific calcium binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14 | 分子名称: | ACETIC ACID, CALCIUM ION, Calcineurin B-like protein 2, ... | 著者 | Akaboshi, M, Hashimoto, H, Ishida, H, Koizumi, N, Sato, M, Shimizu, T. | 登録日 | 2007-12-29 | 公開日 | 2008-02-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | The crystal structure of plant-specific calcium-binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14 J.Mol.Biol., 377, 2008
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2ZVM
| Crystal structure of PCNA in complex with DNA polymerase iota fragment | 分子名称: | DNA polymerase iota, Proliferating cell nuclear antigen | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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2ZVL
| Crystal structure of PCNA in complex with DNA polymerase kappa fragment | 分子名称: | DNA polymerase kappa, Proliferating cell nuclear antigen, SULFATE ION, ... | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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