Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7YVO
DownloadVisualize
BU of 7yvo by Molmil
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH132 Fab heavy chain, ...
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
7YVM
DownloadVisualize
BU of 7yvm by Molmil
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab
Descriptor: Spike glycoprotein, TH281 Fab heavy chain, TH281 Fab light chain
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
7YVL
DownloadVisualize
BU of 7yvl by Molmil
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab
Descriptor: Spike glycoprotein, TH272 Fab heavy chain, TH272 Fab light chain
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
7YVF
DownloadVisualize
BU of 7yvf by Molmil
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH027 Fab
Descriptor: Spike glycoprotein, TH027 Fab heavy chain, TH027 Fab light chain
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
7YVJ
DownloadVisualize
BU of 7yvj by Molmil
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH236 Fab
Descriptor: Spike glycoprotein, TH236 Fab heavy chain, TH236 Fab light chain
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
7YVI
DownloadVisualize
BU of 7yvi by Molmil
Omicron BA.4/5 SARS-CoV-2 S in complex with TH236 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH236 Fab heavy chain, ...
Authors:Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z.
Deposit date:2022-08-19
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
5ZPW
DownloadVisualize
BU of 5zpw by Molmil
Generation of a long-acting fusion inhibitor against HIV-1
Descriptor: MET-THR-TRP-GLU-GLU-TRP-ASP-MK8-LYS-ILE-GLU-MK8-TYR-THR-MK8-LYS-ILE-GLU-MK8-LEU-ILE-LYS-LYS-SER, Transmembrane protein gp41
Authors:Guo, Y, Shi, X.L.
Deposit date:2018-04-16
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Generation of a long-acting fusion inhibitor against HIV-1.
Medchemcomm, 9, 2018
7C9N
DownloadVisualize
BU of 7c9n by Molmil
Crystal structure of SETDB1 tudor domain in complexed with Compound 1.
Descriptor: 3,5-dimethyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]pyrrolo[3,2-d]pyrimidin-4-one, Histone-lysine N-methyltransferase SETDB1
Authors:Guo, Y, Xiong, L, Mao, X, Yang, S.
Deposit date:2020-06-06
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structure-Guided Discovery of a Potent and Selective Cell-Active Inhibitor of SETDB1 Tudor Domain.
Angew.Chem.Int.Ed.Engl., 60, 2021
7DBW
DownloadVisualize
BU of 7dbw by Molmil
PnpA1, the oxygenase component of a two-component para-nitrophenol hydroxylase from Rhodococcus imtechensis RKJ300
Descriptor: 4-hydroxyphenylacetate 3-hydroxylase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-10-22
Release date:2020-11-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Single-Component and Two-Component para -Nitrophenol Monooxygenases: Structural Basis for Their Catalytic Difference.
Appl.Environ.Microbiol., 87, 2021
7D2F
DownloadVisualize
BU of 7d2f by Molmil
Lp major histidine acid phosphatase mutant D281A/5'-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Major acid phosphatase
Authors:Guo, Y, Teng, Y.
Deposit date:2020-09-16
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into a new substrate binding mode of a histidine acid phosphatase from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 540, 2021
7DOQ
DownloadVisualize
BU of 7doq by Molmil
Lp major histidine acid phosphatase mutant D281A/5'-AMP
Descriptor: Acid phosphatase, PHOSPHATE ION
Authors:Guo, Y, Teng, Y.
Deposit date:2020-12-16
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into a new substrate binding mode of a histidine acid phosphatase from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 540, 2021
6J2S
DownloadVisualize
BU of 6j2s by Molmil
Structure of HitA bound to gallium from Pseudomonas aeruginosa
Descriptor: Ferric iron-binding periplasmic protein, GALLIUM (III) ION, PHOSPHATE ION
Authors:Guo, Y, Li, H.Y, Sun, H.Z, Xia, W.
Deposit date:2019-01-02
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73005116 Å)
Cite:Identification and Characterization of a Metalloprotein Involved in Gallium Internalization in Pseudomonas aeruginosa.
Acs Infect Dis., 5, 2019
6LR1
DownloadVisualize
BU of 6lr1 by Molmil
Hexachlorobenzene Monooxygenase (HcbA1) from Nocardioides sp. strain PD653
Descriptor: Hexachlorobenzene oxidative dehalogenase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-01-15
Release date:2020-01-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights.
Appl.Environ.Microbiol., 87, 2020
7VIB
DownloadVisualize
BU of 7vib by Molmil
Crystal structure of human ACE2 and GX/P2V RBD
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein, ZINC ION
Authors:Guo, Y, Cao, W, Jia, N, Wang, W, Yuan, S, Wang, Y.
Deposit date:2021-09-26
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of human ACE2 and GX/P2V RBD
To Be Published
7CJU
DownloadVisualize
BU of 7cju by Molmil
Crystal structure of inactive form of chitosanase crystallized by ammonium sulfate
Descriptor: Glucanase
Authors:Guo, Y, Qu, L, Nishida, N, Hoshino, T.
Deposit date:2020-07-14
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Electrostatic Potentials around the Proteins Preferably Crystallized by Ammonium Sulfate
Cryst.Growth Des., 21, 2021
7CZA
DownloadVisualize
BU of 7cza by Molmil
Hexachlorobenzene monooxygenase (HcbA1) from Nocardioides sp. strain PD653 complexed with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Hexachlorobenzene oxidative dehalogenase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-09-07
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights.
Appl.Environ.Microbiol., 87, 2020
7XGC
DownloadVisualize
BU of 7xgc by Molmil
Crystal structure of influenza polymerase acidic subunit N-terminal domain crystallized by ammonium sulfate with glycan
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION
Authors:Guo, Y, Hoshino, T.
Deposit date:2022-04-04
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Influence of Glycan Agents on Protein Crystallization with Ammonium Sulfate
Cryst.Growth Des., 2022
7XGQ
DownloadVisualize
BU of 7xgq by Molmil
Crystal structure of chitosanase crystallized by ammonium sulfate with glycan
Descriptor: chitosanase
Authors:Guo, Y, Hoshino, T.
Deposit date:2022-04-05
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Influence of Glycan Agents on Protein Crystallization with Ammonium Sulfate
Cryst.Growth Des., 2022
4XZC
DownloadVisualize
BU of 4xzc by Molmil
The crystal structure of Kupe virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
Deposit date:2015-02-04
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
4XZE
DownloadVisualize
BU of 4xze by Molmil
The crystal structure of Hazara virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
Deposit date:2015-02-04
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
4XZA
DownloadVisualize
BU of 4xza by Molmil
The crystal structure of Erve virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
Deposit date:2015-02-04
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
4XZ8
DownloadVisualize
BU of 4xz8 by Molmil
The crystal structure of Erve virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
Deposit date:2015-02-04
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
8GPY
DownloadVisualize
BU of 8gpy by Molmil
Crystal structure of Omicron BA.4/5 RBD in complex with a neutralizing antibody scFv
Descriptor: Spike protein S1, scFv
Authors:Gao, Y.X, Song, Z.D, Wang, W.M, Guo, Y.
Deposit date:2022-08-27
Release date:2023-06-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection.
Nat Commun, 14, 2023
6H1J
DownloadVisualize
BU of 6h1j by Molmil
TarP native
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable ss-1,3-N-acetylglucosaminyltransferase
Authors:Guo, Y, Stehle, T.
Deposit date:2018-07-11
Release date:2018-09-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Methicillin-resistant Staphylococcus aureus alters cell wall glycosylation to evade immunity.
Nature, 563, 2018
6H2N
DownloadVisualize
BU of 6h2n by Molmil
TarP-UDP-GlcNAc-Mg
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Guo, Y, Stehle, T.
Deposit date:2018-07-13
Release date:2018-09-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Methicillin-resistant Staphylococcus aureus alters cell wall glycosylation to evade immunity.
Nature, 563, 2018

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon