Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6EN7
DownloadVisualize
BU of 6en7 by Molmil
Crystal structure of the ribosome assembly factor Nsa1
Descriptor: Ribosome biogenesis protein NSA1
Authors:Altegoer, F, Bange, G.
Deposit date:2017-10-04
Release date:2017-12-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EMG
DownloadVisualize
BU of 6emg by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group P6322
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, G0S4M2, ...
Authors:Ahmed, Y.L, Sinning, I.
Deposit date:2017-10-02
Release date:2017-12-27
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6A50
DownloadVisualize
BU of 6a50 by Molmil
structure of benzoylformate decarboxylases in complex with cofactor TPP
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, benzoylformate decarboxylases
Authors:Guo, Y, Wang, S, Nie, Y, Li, S.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Synthetic Pathway for Acetyl-Coenzyme A Biosynthesis
Nat Commun, 2019
7YET
DownloadVisualize
BU of 7yet by Molmil
The structure of EBOV L-VP35 in complex with suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Polymerase cofactor VP35, RNA-directed RNA polymerase L
Authors:Shi, Y, Yuan, B, Peng, Q.
Deposit date:2022-07-06
Release date:2022-10-05
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the Ebola virus polymerase complex.
Nature, 610, 2022
7YES
DownloadVisualize
BU of 7yes by Molmil
The structure of EBOV L-VP35-RNA complex (state2)
Descriptor: RNA-directed RNA polymerase L, VP35 of EBOV L-VP35 complex, ZINC ION
Authors:Shi, Y, Yuan, B, Peng, Q.
Deposit date:2022-07-06
Release date:2022-10-05
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the Ebola virus polymerase complex.
Nature, 610, 2022
7YER
DownloadVisualize
BU of 7yer by Molmil
The structure of EBOV L-VP35 complex
Descriptor: Polymerase cofactor VP35, RNA-directed RNA polymerase L, ZINC ION
Authors:Shi, Y, Yuan, B, Peng, Q.
Deposit date:2022-07-06
Release date:2022-10-05
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the Ebola virus polymerase complex.
Nature, 610, 2022
8H2F
DownloadVisualize
BU of 8h2f by Molmil
Crystal structure of DnaQ domain in complex witn TMP of Streptococcus thermophilus strain DGCC 7710
Descriptor: DnaQ, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE
Authors:Chen, Q, Yu, Y.
Deposit date:2022-10-05
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:DnaQ mediates directional spacer acquisition in the CRISPR-Cas system by a time-dependent mechanism.
Innovation (N Y), 4, 2023
8H18
DownloadVisualize
BU of 8h18 by Molmil
Crystal structure of DnaQ domain of Streptococcus thermophilus strain DGCC 7710
Descriptor: DnaQ, GLYCEROL, MAGNESIUM ION
Authors:Chen, Q, Yu, Y.
Deposit date:2022-10-01
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:DnaQ mediates directional spacer acquisition in the CRISPR-Cas system by a time-dependent mechanism.
Innovation (N Y), 4, 2023
5WUA
DownloadVisualize
BU of 5wua by Molmil
Structure of a Pancreatic ATP-sensitive Potassium Channel
Descriptor: ATP-sensitive inward rectifier potassium channel 11,superfolder GFP, SUR1
Authors:Li, N, Wu, J.-X, Chen, L, Gao, N.
Deposit date:2016-12-16
Release date:2017-01-25
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structure of a Pancreatic ATP-Sensitive Potassium Channel
Cell, 168, 2017
7Y01
DownloadVisualize
BU of 7y01 by Molmil
Crystal structure of ZmMCM10 in complex with 16nt ssDNA at 2.8. Angstrom resolution
Descriptor: DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), MCM10 minichromosome maintenance deficient 10, ZINC ION
Authors:Du, X, Du, J.
Deposit date:2022-06-03
Release date:2023-04-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:AtMCM10 promotes DNA replication-coupled nucleosome assembly in Arabidopsis.
J Integr Plant Biol, 65, 2023
8HI1
DownloadVisualize
BU of 8hi1 by Molmil
Streptococcus thermophilus Cas1-Cas2- prespacer ternary complex
Descriptor: CRISPR-associated endonuclease Cas1, DNA (26-MER), DNA (31-MER), ...
Authors:Chen, Q, Luo, Y.
Deposit date:2022-11-18
Release date:2023-09-13
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:DnaQ mediates directional spacer acquisition in the CRISPR-Cas system by a time-dependent mechanism.
Innovation (N Y), 4, 2023
8HQN
DownloadVisualize
BU of 8hqn by Molmil
Activation mechanism of GPR132 by 9(S)-HODE
Descriptor: (9S,10E,12Z)-9-hydroxyoctadeca-10,12-dienoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HQE
DownloadVisualize
BU of 8hqe by Molmil
Cryo-EM structure of the apo-GPR132-Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HQM
DownloadVisualize
BU of 8hqm by Molmil
Activation mechanism of GPR132 by NPGLY
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
8HVI
DownloadVisualize
BU of 8hvi by Molmil
Activation mechanism of GPR132 by compound NOX-6-7
Descriptor: 3-methyl-5-[(4-oxidanylidene-4-phenyl-butanoyl)amino]-1-benzofuran-2-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-26
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
7PL7
DownloadVisualize
BU of 7pl7 by Molmil
Crystal structure of yeast Otu2 OTU domain
Descriptor: OTU domain-containing protein 2
Authors:Ivic, N, Cheng, J, Becker, T, Ikeuchi, K.
Deposit date:2021-08-28
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of yeast Otu2 OTU domain
To Be Published
7CR6
DownloadVisualize
BU of 7cr6 by Molmil
Synechocystis Cas1-Cas2/prespacer binary complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2 1, DNA (36-MER)
Authors:Yu, Y, Chen, Q.
Deposit date:2020-08-12
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:Mechanisms of spacer acquisition by sequential assembly of the adaptation module in Synechocystis.
Nucleic Acids Res., 49, 2021
7CR8
DownloadVisualize
BU of 7cr8 by Molmil
Synechocystis Cas1-Cas2-prespacerL complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2 1, DNA (36-MER)
Authors:Yu, Y, Chen, Q.
Deposit date:2020-08-12
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Mechanisms of spacer acquisition by sequential assembly of the adaptation module in Synechocystis.
Nucleic Acids Res., 49, 2021
7DXJ
DownloadVisualize
BU of 7dxj by Molmil
Human 46QHuntingtin-HAP40 complex structure
Descriptor: 40-kDa huntingtin-associated protein, Huntingtin
Authors:Guo, Q, Fernandez-Busnadiego, R.
Deposit date:2021-01-19
Release date:2021-03-24
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Pathological polyQ expansion does not alter the conformation of the Huntingtin-HAP40 complex.
Structure, 29, 2021
7DXK
DownloadVisualize
BU of 7dxk by Molmil
Human 128QHuntingtin-HAP40 complex structure
Descriptor: 40-kDa huntingtin-associated protein, Huntingtin
Authors:Guo, Q, Fernandez-Busnadiego, R.
Deposit date:2021-01-19
Release date:2021-03-24
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Pathological polyQ expansion does not alter the conformation of the Huntingtin-HAP40 complex.
Structure, 29, 2021
6ZVI
DownloadVisualize
BU of 6zvi by Molmil
Mbf1-ribosome complex
Descriptor: 18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ...
Authors:Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
Deposit date:2020-07-24
Release date:2020-09-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
6ZVH
DownloadVisualize
BU of 6zvh by Molmil
EDF1-ribosome complex
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
Deposit date:2020-07-24
Release date:2020-08-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
6R2M
DownloadVisualize
BU of 6r2m by Molmil
Crystal structure of PssZ from Listeria monocytogenes
Descriptor: Glycoside transferase
Authors:Wu, H, Cheng, J, Qiao, S, Li, D, Ma, L.
Deposit date:2019-03-18
Release date:2019-07-24
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.617 Å)
Cite:Crystal structure of the glycoside hydrolase PssZ from Listeria monocytogenes.
Acta Crystallogr.,Sect.F, 75, 2019
7X6W
DownloadVisualize
BU of 7x6w by Molmil
SFTSV 2 fold hexamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sun, Z, Lou, Z.
Deposit date:2022-03-08
Release date:2023-07-19
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (5.18 Å)
Cite:Architecture of severe fever with thrombocytopenia syndrome virus.
Protein Cell, 14, 2023
7X72
DownloadVisualize
BU of 7x72 by Molmil
SFTSV 5 fold pentamer
Descriptor: Envelopment polyprotein, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sun, Z, Lou, Z.
Deposit date:2022-03-08
Release date:2023-08-16
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Architecture of severe fever with thrombocytopenia syndrome virus.
Protein Cell, 14, 2023

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon