Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4YDK
DownloadVisualize
BU of 4ydk by Molmil
Crystal structure of broadly and potently neutralizing antibody C38-VRC16.01 in complex with HIV-1 clade AE strain 93TH057 gp120
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, T, Moquin, S, Zheng, A, Kwong, P.D.
Deposit date:2015-02-22
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Cell, 161, 2015
4YDJ
DownloadVisualize
BU of 4ydj by Molmil
Crystal structure of broadly and potently neutralizing antibody 44-VRC13.01 in complex with HIV-1 clade AE strain 93TH057 gp120
Descriptor: (R,R)-2,3-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Zhou, T, Moquin, S, Kwong, P.D.
Deposit date:2015-02-22
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.308 Å)
Cite:Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Cell, 161, 2015
8V2E
DownloadVisualize
BU of 8v2e by Molmil
Crystal structure of B055 scaffold boost immunogen in complex with a mature 10E8 Fab
Descriptor: 10E8 EPITOPE SCAFFOLD B055, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 10E8 FAB HEAVY CHAIN, ...
Authors:Cho, S.Y, Wilson, I.A.
Deposit date:2023-11-22
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Vaccination induces broadly neutralizing antibody precursors to HIV gp41.
Nat.Immunol., 25, 2024
4YDL
DownloadVisualize
BU of 4ydl by Molmil
Crystal structure of broadly and potently neutralizing antibody C38-VRC18.02 in complex with HIV-1 clade AE strain 93TH057gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Envelope glycoprotein gp160,Envelope glycoprotein gp160, ...
Authors:Zhou, T, Srivatsan, S, Kwong, P.D.
Deposit date:2015-02-22
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Cell, 161, 2015
4YFL
DownloadVisualize
BU of 4yfl by Molmil
Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 1B2530 in complex with HIV-1 clade A/E 93TH057 gp120
Descriptor: 1B2530 Light chain, 1B2530 heavy chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Acharya, P, Zhou, T, Moquin, S, Kwong, P.D.
Deposit date:2015-02-25
Release date:2015-06-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.387 Å)
Cite:Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Cell, 161, 2015
4YE4
DownloadVisualize
BU of 4ye4 by Molmil
Crystal Structure of Neutralizing Antibody HJ16 in Complex with HIV-1 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HT593.1 gp120, Heavy chain human antibody HJ16, ...
Authors:Kwong, P.D, Chen, L, Zhou, T.
Deposit date:2015-02-23
Release date:2015-07-22
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Cell, 161, 2015
8VBR
DownloadVisualize
BU of 8vbr by Molmil
Structure of bovine anti-HIV Fab ElsE11
Descriptor: Bovine Fab ElsE11 light chain, Bovine Fab Else11 heavy chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBM
DownloadVisualize
BU of 8vbm by Molmil
Structure of bovine anti-HIV Fab ElsE7
Descriptor: Bovine Fab ElsE7 heavy chain, Bovine Fab ElsE7 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBK
DownloadVisualize
BU of 8vbk by Molmil
Structure of bovine anti-HIV Fab ElsE5
Descriptor: Bovine Fab ElsE5 heavy chain, Bovine Fab ElsE5 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBJ
DownloadVisualize
BU of 8vbj by Molmil
Structure of bovine anti-HIV Fab ElsE2
Descriptor: Bovine Fab ElsE2 heavy chain, Bovine Fab ElsE2 light chain, POTASSIUM ION, ...
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBN
DownloadVisualize
BU of 8vbn by Molmil
Structure of bovine anti-HIV Fab ElsE8
Descriptor: Bovine Fab ElsE8 heavy chain, Bovine Fab ElsE8 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBP
DownloadVisualize
BU of 8vbp by Molmil
Structure of bovine anti-HIV Fab Bess4
Descriptor: Bovine Fab Bess4 heavy chain, Bovine Fab Bess4 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBQ
DownloadVisualize
BU of 8vbq by Molmil
Structure of bovine anti-HIV Fab Bess7
Descriptor: Bovine Fab Bess7 heavy chain, Bovine Fab Bess7 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8V4I
DownloadVisualize
BU of 8v4i by Molmil
Structure of bovine anti-HIV Fab ElsE1
Descriptor: ElsE1 Fab heavy chain, ElsE1 Fab light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-11-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBO
DownloadVisualize
BU of 8vbo by Molmil
Structure of bovine anti-HIV Fab ElsE9
Descriptor: Bovine Fab ElsE9 heavy chain, Bovine Fab ElsE9 light chain, GLYCEROL, ...
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
8VBL
DownloadVisualize
BU of 8vbl by Molmil
Structure of bovine anti-HIV Fab ElsE6
Descriptor: Bovine Fab ElsE6 heavy chain, Bovine Fab ElsE6 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-12-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
5AWN
DownloadVisualize
BU of 5awn by Molmil
Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC176 Fab
Descriptor: Heavy chain of 3BC176 Fab, Light chain of 3BC176 Fab
Authors:Lee, J.H, Wilson, I.A, Ward, A.B.
Deposit date:2015-07-06
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.
Nat Commun, 6, 2015
6DFH
DownloadVisualize
BU of 6dfh by Molmil
BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Ozorowski, G, Steichen, J.M, Schief, W.R, Ward, A.B.
Deposit date:2018-05-14
Release date:2019-11-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses.
Science, 366, 2019
6DID
DownloadVisualize
BU of 6did by Molmil
HIV Env BG505 SOSIP with polyclonal Fabs from immunized rabbit #3417 post-boost#1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Turner, H.L, Cottrell, C.A, Oyen, D, Wilson, I.A, Ward, A.B.
Deposit date:2018-05-23
Release date:2018-09-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.71 Å)
Cite:Electron-Microscopy-Based Epitope Mapping Defines Specificities of Polyclonal Antibodies Elicited during HIV-1 BG505 Envelope Trimer Immunization.
Immunity, 49, 2018
6DFG
DownloadVisualize
BU of 6dfg by Molmil
BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Ozorowski, G, Steichen, J.M, Schief, W.R, Ward, A.B.
Deposit date:2018-05-14
Release date:2019-11-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.42 Å)
Cite:A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses.
Science, 366, 2019
6CE0
DownloadVisualize
BU of 6ce0 by Molmil
Crystal structure of a HIV-1 clade B tier-3 isolate H078.14 UFO-BG Env trimer in complex with broadly neutralizing Fabs PGT124 and 35O22 at 4.6 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Heavy chain, ...
Authors:Kumar, S, Sarkar, A, Wilson, I.A.
Deposit date:2018-02-09
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.602 Å)
Cite:HIV-1 vaccine design through minimizing envelope metastability.
Sci Adv, 4, 2018
6CJK
DownloadVisualize
BU of 6cjk by Molmil
Anti HIV Fab 10A
Descriptor: ACETATE ION, GLYCEROL, Immunoglobulin Fab heavy chain, ...
Authors:Hangartner, L, Ward, A.B, Wilson, I.A, Oyen, D.
Deposit date:2018-02-26
Release date:2018-08-15
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Electron-Microscopy-Based Epitope Mapping Defines Specificities of Polyclonal Antibodies Elicited during HIV-1 BG505 Envelope Trimer Immunization.
Immunity, 49, 2018
6VSL
DownloadVisualize
BU of 6vsl by Molmil
Crystal structure of a human fucosylated IgG1 Fc expressed in tobacco plants (Nicotiana benthamiana)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2020-02-11
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhanced Ability of Plant-Derived PGT121 Glycovariants To Eliminate HIV-1-Infected Cells.
J.Virol., 95, 2021
6VSZ
DownloadVisualize
BU of 6vsz by Molmil
Crystal structure of a human afucosylated IgG1 Fc expressed in tobacco plants (Nicotiana benthamiana)
Descriptor: Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2020-02-12
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Enhanced Ability of Plant-Derived PGT121 Glycovariants To Eliminate HIV-1-Infected Cells.
J.Virol., 95, 2021
6XY4
DownloadVisualize
BU of 6xy4 by Molmil
Structural insight into sheep-pox virus mediated inhibition of apoptosis
Descriptor: Activator of apoptosis harakiri, anti-apoptotic membrane protein
Authors:Suraweera, C.D, Hinds, M.G, Kvansakul, M.
Deposit date:2020-01-29
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.04623151 Å)
Cite:Crystal structures of the sheeppox virus encoded inhibitor of apoptosis SPPV14 bound to the proapoptotic BH3 peptides Hrk and Bax.
Febs Lett., 594, 2020

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon