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7KV4
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BU of 7kv4 by Molmil
Surface glycan-binding protein A from Bacteroides fluxus
Descriptor: SusD family protein
Authors:Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:2020-11-26
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota.
J.Biol.Chem., 296, 2021
7KWC
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BU of 7kwc by Molmil
Surface glycan-binding protein B (truncated) from Bacteroides thetaiotaomicron
Descriptor: BtSGBP-B_31-285
Authors:Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:2020-11-30
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota.
J.Biol.Chem., 296, 2021
7KR6
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BU of 7kr6 by Molmil
Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G3G-2F-DNP
Descriptor: Glycoside hydrolase family 16 protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-2-deoxy-2-fluoro-alpha-D-glucopyranose
Authors:Tamura, K, Brumer, H, van Petegem, F.
Deposit date:2020-11-18
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Orthogonal Active-Site Labels for Mixed-Linkage endo-beta-Glucanases.
Acs Chem.Biol., 16, 2021
5SUO
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BU of 5suo by Molmil
Crystal structure of N-glycan transport solute binding protein (NgtS) from Streptococcus pneumoniae
Descriptor: Extracellular solute-binding protein, IODIDE ION
Authors:Robb, M, Boraston, A.B.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence.
PLoS Pathog., 13, 2017
3VDH
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BU of 3vdh by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14
Descriptor: B-1,4-endoglucanase, CHLORIDE ION
Authors:Stogios, P.J, Evdokimova, E, Egorova, O, Yim, V, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-05
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
5SWA
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BU of 5swa by Molmil
Crystal structure of N-glycan transport solute binding protein (NgtS) from Streptococcus pneumoniae in complex with Man1GlcNAc
Descriptor: BROMIDE ION, Extracellular solute-binding protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Robb, M, Boraston, A.B.
Deposit date:2016-08-08
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence.
PLoS Pathog., 13, 2017
5SWI
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BU of 5swi by Molmil
Crystal structure of SpGH92 in complex with mannose
Descriptor: CALCIUM ION, GLYCEROL, Sugar hydrolase, ...
Authors:Shapiro-Ward, S, Boraston, A.B.
Deposit date:2016-08-08
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence.
PLoS Pathog., 13, 2017
5SWB
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BU of 5swb by Molmil
Crystal structure of N-glycan transport solute binding protein (NgtS) from Streptococcus pneumoniae in complex with Man5GlcNAc
Descriptor: CADMIUM ION, Extracellular solute-binding protein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-5)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Robb, M, Boraston, A.B.
Deposit date:2016-08-08
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence.
PLoS Pathog., 13, 2017
6BS6
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BU of 6bs6 by Molmil
SusG with mixed linkage amylosaccharide
Descriptor: ACETATE ION, Alpha-amylase SusG, CALCIUM ION, ...
Authors:Koropatkin, N.M, Cockburn, D.W.
Deposit date:2017-12-01
Release date:2018-01-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural basis for the flexible recognition of alpha-glucan substrates by Bacteroides thetaiotaomicron SusG.
Protein Sci., 27, 2018
6RYV
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BU of 6ryv by Molmil
Copper oxidase from Colletotrichum graminicola
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Kelch domain-containing protein, ...
Authors:Offen, W.A, Henrissat, B, Davies, G.J.
Deposit date:2019-06-12
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of a Fungal Copper Radical Oxidase with High Catalytic Efficiency toward 5-Hydroxymethylfurfural and Benzyl Alcohols for Bioprocessing
Acs Catalysis, 2020
6RYX
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BU of 6ryx by Molmil
Copper oxidase from Colletotrichum graminicola
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Offen, W.A, Henrissat, B, Davies, G.J.
Deposit date:2019-06-12
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of a Fungal Copper Radical Oxidase with High Catalytic Efficiency toward 5-Hydroxymethylfurfural and Benzyl Alcohols for Bioprocessing
Acs Catalysis, 2020
6RYW
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BU of 6ryw by Molmil
Copper oxidase from Colletotrichum graminicola
Descriptor: COPPER (II) ION, Kelch domain-containing protein, TRIETHYLENE GLYCOL
Authors:Offen, W.A, Henrissat, B, Davies, G.J.
Deposit date:2019-06-12
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery of a Fungal Copper Radical Oxidase with High Catalytic Efficiency toward 5-Hydroxymethylfurfural and Benzyl Alcohols for Bioprocessing
Acs Catalysis, 2020
6STX
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BU of 6stx by Molmil
Copper oxidase from Colletotrichum graminicola
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Kelch domain-containing protein, ...
Authors:Offen, W.A, Henrissat, B, Davies, G.J.
Deposit date:2019-09-12
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of a Fungal Copper Radical Oxidase with High Catalytic Efficiency toward 5-Hydroxymethylfurfural and Benzyl Alcohols for Bioprocessing
Acs Catalysis, 2020
6P2M
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BU of 6p2m by Molmil
Crystal structure of the Caldicellulosiruptor lactoaceticus GH74 (ClGH74a) enzyme in complex with LLG xyloglucan
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Arnal, G.
Deposit date:2019-05-21
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.
J.Biol.Chem., 294, 2019
6P2N
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BU of 6p2n by Molmil
Crystal structure of Paenibacillus graminis GH74 (PgGH74)
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Stogios, P.J.
Deposit date:2019-05-21
Release date:2019-07-31
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.
J.Biol.Chem., 294, 2019
3HG4
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BU of 3hg4 by Molmil
Human alpha-galactosidase catalytic mechanism 3. Covalent intermediate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guce, A.I, Clark, N.E, Garman, S.C.
Deposit date:2009-05-13
Release date:2009-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of human alpha-galactosidase.
J.Biol.Chem., 285, 2010
3HG5
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BU of 3hg5 by Molmil
Human alpha-galactosidase catalytic mechanism 4. Product bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, Alpha-galactosidase A, ...
Authors:Guce, A.I, Clark, N.E, Garman, S.C.
Deposit date:2009-05-13
Release date:2009-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of human alpha-galactosidase.
J.Biol.Chem., 285, 2010
3HG2
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BU of 3hg2 by Molmil
Human alpha-galactosidase catalytic mechanism 1. Empty active site
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, Alpha-galactosidase A, ...
Authors:Guce, A.I, Clark, N.E, Garman, S.C.
Deposit date:2009-05-13
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of human alpha-galactosidase.
J.Biol.Chem., 285, 2010
3HG3
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BU of 3hg3 by Molmil
Human alpha-galactosidase catalytic mechanism 2. Substrate bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-galactosidase A, ...
Authors:Guce, A.I, Clark, N.E, Garman, S.C.
Deposit date:2009-05-13
Release date:2009-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic mechanism of human alpha-galactosidase.
J.Biol.Chem., 285, 2010
5D9O
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BU of 5d9o by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, E280A mutant in complex with cellotetraose
Descriptor: B-1,4-endoglucanase, CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Morar, M, Stogios, P.J, Xu, X, Cui, H, Di Leo, R, Yim, V, Savchenko, A.
Deposit date:2015-08-18
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
5D9N
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BU of 5d9n by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 member from Prevotella bryantii B14, in complex with the xyloglucan heptasaccharide XXXG
Descriptor: B-1,4-endoglucanase, CALCIUM ION, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Morar, M, Stogios, P.J, Xu, X, Cui, H, Di Leo, R, Yim, V, Savchenko, A.
Deposit date:2015-08-18
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
5D9M
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BU of 5d9m by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, E280A mutant in complex with the xyloglucan tetradecasaccharide XXXGXXXG
Descriptor: B-1,4-endoglucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Morar, M, Stogios, P.J, Xu, X, Cui, H, Di Leo, R, Yim, V, Savchenko, A.
Deposit date:2015-08-18
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
5D9P
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BU of 5d9p by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, in complex with an inhibitory N-bromoacetylglycosylamine derivative of XXXG
Descriptor: B-1,4-endoglucanase, CALCIUM ION, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-N-acetyl-beta-D-glucopyranosylamine
Authors:Morar, M, Stogios, P.J, Xu, X, Cui, H, Di Leo, R, Yim, V, Savchenko, A.
Deposit date:2015-08-18
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
6HA9
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BU of 6ha9 by Molmil
Structure of an endo-Xyloglucanase from Cellvibrio japonicus complexed with XXXG(2F)-beta-DNP
Descriptor: Cellulase, putative, cel5D, ...
Authors:Offen, W.A, Davies, G.J.
Deposit date:2018-08-07
Release date:2018-10-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and application of a highly branched, mechanism-based 2-deoxy-2-fluoro-oligosaccharide inhibitor of endo-xyloglucanases.
Org. Biomol. Chem., 16, 2018
6HAA
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BU of 6haa by Molmil
Structure of a covalent complex of endo-Xyloglucanase from Cellvibrio japonicus after reacting with XXXG(2F)-beta-DNP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cellulase, putative, ...
Authors:Offen, W, Davies, G.J.
Deposit date:2018-08-07
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis and application of a highly branched, mechanism-based 2-deoxy-2-fluoro-oligosaccharide inhibitor of endo-xyloglucanases.
Org. Biomol. Chem., 16, 2018

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