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4P17
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BU of 4p17 by Molmil
Crystal structure of the Chlamydomonas flagellar RabGAP TBC domain.
Descriptor: RabGAP/TBC protein
Authors:Bhogaraju, S, Lorentzen, E.
Deposit date:2014-02-25
Release date:2014-04-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7941 Å)
Cite:Crystal structure of a Chlamydomonas reinhardtii flagellar RabGAP TBC-domain at 1.8 angstrom resolution.
Proteins, 82, 2014
4LVR
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BU of 4lvr by Molmil
Crystal structure of IFT81 N-terminal domain
Descriptor: Intraflagellar transport protein 81
Authors:Bhogaraju, S.
Deposit date:2013-07-26
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular Basis of Tubulin Transport Within the Cilium by IFT74 and IFT81.
Science, 341, 2013
4LVP
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BU of 4lvp by Molmil
Crystal structure of IFT81 N-terminal domain
Descriptor: Intraflagellar transport protein 81, Tantalum
Authors:Bhogaraju, S.
Deposit date:2013-07-26
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Molecular Basis of Tubulin Transport Within the Cilium by IFT74 and IFT81.
Science, 341, 2013
6S5T
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BU of 6s5t by Molmil
Legionella pneumophila SidJ-Human calmodulin complex
Descriptor: Calmodulin-2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SidJ
Authors:Bhogaraju, S, Galej, W.P, Pfleiderer, M.M, Adams, M.
Deposit date:2019-07-02
Release date:2019-07-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.15 Å)
Cite:Inhibition of bacterial ubiquitin ligases by SidJ-calmodulin catalysed glutamylation.
Nature, 572, 2019
2YC2
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BU of 2yc2 by Molmil
Intraflagellar Transport Complex 25-27 from Chlamydomonas
Descriptor: CALCIUM ION, INTRAFLAGELLAR TRANSPORT PROTEIN 25, SMALL RAB-RELATED GTPASE
Authors:Bhogaraju, S, Taschner, M, Lorentzen, E.
Deposit date:2011-03-11
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.588 Å)
Cite:Crystal Structure of the Intraflagellar Transport Complex 25/27.
Embo J., 30, 2011
2YC4
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BU of 2yc4 by Molmil
Intraflagellar Transport Complex 25-27 from Chlamydomonas
Descriptor: CALCIUM ION, CHLORIDE ION, INTRAFLAGELLAR TRANSPORT PROTEIN 25, ...
Authors:Bhogaraju, S, Taschner, M, Lorentzen, E.
Deposit date:2011-03-11
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Intraflagellar Transport Complex 25/27.
Embo J., 30, 2011
5JW7
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BU of 5jw7 by Molmil
Crystal structure of SopA-Trim56 complex
Descriptor: E3 ubiquitin-protein ligase SopA, E3 ubiquitin-protein ligase TRIM56, ZINC ION
Authors:Bhogaraju, S, Dikic, I.
Deposit date:2016-05-11
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.849 Å)
Cite:Structural basis for the recognition and degradation of host TRIM proteins by Salmonella effector SopA.
Nat Commun, 8, 2017
5M93
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BU of 5m93 by Molmil
Crystal structure of SdeA-modified ubiquitin.
Descriptor: Polyubiquitin-B, SULFATE ION, alpha-D-ribofuranose
Authors:Kalayil, S, Bhogaraju, S, Dikic, I.
Deposit date:2016-10-31
Release date:2016-12-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.793 Å)
Cite:Phosphoribosylation of Ubiquitin Promotes Serine Ubiquitination and Impairs Conventional Ubiquitination.
Cell, 167, 2016
8QHC
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BU of 8qhc by Molmil
Cryo-EM structure of SidH from Legionella pneumophila in complex with LubX
Descriptor: E3 ubiquitin--protein ligase, Elongation factor Tu, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Sharma, R, Adams, M, Bhogaraju, S.
Deposit date:2023-09-07
Release date:2023-10-11
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for the toxicity of Legionella pneumophila effector SidH.
Nat Commun, 14, 2023
8QFS
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BU of 8qfs by Molmil
Cryo-EM structure of SidH from Legionella pneumophila
Descriptor: Elongation factor Tu, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sharma, R, Weis, F, Bhogaraju, S.
Deposit date:2023-09-04
Release date:2023-10-11
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for the toxicity of Legionella pneumophila effector SidH.
Nat Commun, 14, 2023
9H2D
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BU of 9h2d by Molmil
Human IFT172 C-terminal U-box domain crystal structure
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Intraflagellar transport protein 172 homolog
Authors:Lorentzen, E, Zacharia, N.K, Bhogaraju, S.
Deposit date:2024-10-11
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Intraflagellar transport protein IFT172 contains a C-terminal ubiquitin-binding U-box-like domain involved in ciliary signaling
To Be Published
6G0C
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BU of 6g0c by Molmil
Crystal structure of SdeA catalytic core
Descriptor: 1,2-ETHANEDIOL, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Ubiquitinating/deubiquitinating enzyme SdeA
Authors:Kalayil, S, Bhogaraju, S, Basquin, J, Dikic, I.
Deposit date:2018-03-17
Release date:2018-05-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Insights into catalysis and function of phosphoribosyl-linked serine ubiquitination.
Nature, 557, 2018
3X0W
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BU of 3x0w by Molmil
Crystal structure of PLEKHM1 LIR-fused human LC3B_2-119
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Suzuki, H, McEwan, D.G, Popovic, D, Gubas, A, Terawaki, S, Stadel, D, Coxon, F, Stegmann, D.M, Bhogaraju, S, Maddi, K, Kirchhoff, A, Gatti, E, Helfrich, M.H, Behrends, C, Pierre, P, Dikic, I, Wakatsuki, S.
Deposit date:2014-10-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:PLEKHM1 regulates autophagosome-lysosome fusion through HOPS complex and LC3/GABARAP proteins.
Mol.Cell, 57, 2015
7PQE
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BU of 7pqe by Molmil
Structure of SidJ/CaM bound to SdeA in post-catalysis state
Descriptor: CALCIUM ION, Calmodulin, Calmodulin-dependent glutamylase SidJ, ...
Authors:Adams, M, Bhogaraju, S.
Deposit date:2021-09-17
Release date:2021-10-06
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for protein glutamylation by the Legionella pseudokinase SidJ.
Nat Commun, 12, 2021
7PPO
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BU of 7ppo by Molmil
Structure of SidJ/CaM bound to SdeA in pre-glutamylation state
Descriptor: CALCIUM ION, Calmodulin, Calmodulin-dependent glutamylase SidJ, ...
Authors:Adams, M, Bhogaraju, S.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural basis for protein glutamylation by the Legionella pseudokinase SidJ.
Nat Commun, 12, 2021
5NNZ
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BU of 5nnz by Molmil
Crystal structure of human ODA16
Descriptor: Dynein assembly factor with WDR repeat domains 1
Authors:Lorentzen, E, Taschner, T, Basquin, J.
Deposit date:2017-04-10
Release date:2017-06-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Purification and crystal structure of human ODA16: Implications for ciliary import of outer dynein arms by the intraflagellar transport machinery.
Protein Sci., 29, 2020
6F6P
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BU of 6f6p by Molmil
Crystal structure of tetrameric human Rabin8 GEF domain
Descriptor: Rab-3A-interacting protein
Authors:Lorentzen, E, Vetter, M.
Deposit date:2017-12-06
Release date:2017-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of tetrameric human Rabin8 GEF domain.
Proteins, 86, 2018
6RYB
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BU of 6ryb by Molmil
Structure of deubiquitinase for PR-ubiquitination 1 -Dup1
Descriptor: Septation initiation protein
Authors:Donghyuk, S, Ivan, D.
Deposit date:2019-06-10
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:Regulation of Phosphoribosyl-Linked Serine Ubiquitination by Deubiquitinases DupA and DupB.
Mol.Cell, 77, 2020
6RYA
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BU of 6rya by Molmil
Structure of Dup1 mutant H67A:Ubiquitin complex
Descriptor: Polyubiquitin-C, Septation initiation protein
Authors:Donghyuk, S, Ivan, D.
Deposit date:2019-06-10
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Regulation of Phosphoribosyl-Linked Serine Ubiquitination by Deubiquitinases DupA and DupB.
Mol.Cell, 77, 2020
5FMS
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BU of 5fms by Molmil
mmIFT52 N-terminal domain
Descriptor: INTRAFLAGELLAR TRANSPORT PROTEIN 52 HOMOLOG
Authors:Mourao, A, Lorentzen, E.
Deposit date:2015-11-09
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.488 Å)
Cite:Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex.
Embo J., 35, 2016
5FMU
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BU of 5fmu by Molmil
MmIFT54 CH-domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TRAF3-INTERACTING PROTEIN 1
Authors:Weber, K, Lorentzen, E.
Deposit date:2015-11-09
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex.
Embo J., 35, 2016
5FMR
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BU of 5fmr by Molmil
crIFT52 N-terminal domain
Descriptor: INTRAFLAGELLAR TRANSPORT PROTEIN COMPONENT IFT52, SULFATE ION
Authors:Mourao, A, Vetter, M, Lorentzen, E.
Deposit date:2015-11-09
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex.
Embo J., 35, 2016
5FMT
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BU of 5fmt by Molmil
CrIFT54 CH-domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAGELLAR ASSOCIATED PROTEIN, GLYCEROL, ...
Authors:Weber, K, Lorentzen, E.
Deposit date:2015-11-09
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.878 Å)
Cite:Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex.
Embo J., 35, 2016

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