Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8AR0
DownloadVisualize
BU of 8ar0 by Molmil
Solution structure of TLR2 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 2
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
5NPN
DownloadVisualize
BU of 5npn by Molmil
Refined structure of cytotoxin I
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Dubovskii, P.V, Arseniev, A.S.
Deposit date:2017-04-17
Release date:2018-04-04
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
5OB4
DownloadVisualize
BU of 5ob4 by Molmil
NMR spatial structure of HER2 TM domain dimer in DPC micelles.
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Arseniev, A.S.
Deposit date:2017-06-26
Release date:2017-11-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR relaxation parameters of methyl groups as a tool to map the interfaces of helix-helix interactions in membrane proteins.
J. Biomol. NMR, 69, 2017
1BUJ
DownloadVisualize
BU of 1buj by Molmil
STRUCTURE OF BINASE IN SOLUTION
Descriptor: PROTEIN (BINASE)
Authors:Reibarkh, M.Y, Nolde, D.E, Vasilieva, L.I, Arseniev, A.S.
Deposit date:1998-09-04
Release date:1998-09-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of binase in solution.
FEBS Lett., 431, 1998
1DLZ
DownloadVisualize
BU of 1dlz by Molmil
SOLUTION STRUCTURE OF THE CHANNEL-FORMER ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC)
Descriptor: ZERVAMICIN IIB
Authors:Balashova, T.A, Shenkarev, Z.O, Tagaev, A.A, Ovchinnikova, T.V, Raap, J, Arseniev, A.S.
Deposit date:1999-12-13
Release date:2000-02-03
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:NMR Structure of the Channel-Former Zervamicin Iib in Isotropic Solvents.
FEBS Lett., 466, 2000
2L8X
DownloadVisualize
BU of 2l8x by Molmil
Spatial structure of antimicrobial peptide Arenicin-2 dimer in DPC micelles
Descriptor: Arenicin-2
Authors:Shenkarev, Z.O, Trunov, K.I, Paramonov, A.S, Arseniev, A.S.
Deposit date:2011-01-27
Release date:2011-12-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Molecular mechanism of action of beta-hairpin antimicrobial peptide arenicin: oligomeric structure in dodecylphosphocholine micelles and pore formation in planar lipid bilayers
Biochemistry, 50, 2011
2N99
DownloadVisualize
BU of 2n99 by Molmil
Solution structure of the SLURP-2, a secreted isoform of Lynx1
Descriptor: Ly-6/neurotoxin-like protein 1
Authors:Paramonov, A.S, Shenkarev, Z.O, Lyukmanova, E.N, Arseniev, A.S.
Deposit date:2015-11-11
Release date:2016-09-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Secreted Isoform of Human Lynx1 (SLURP-2): Spatial Structure and Pharmacology of Interactions with Different Types of Acetylcholine Receptors.
Sci Rep, 6, 2016
2N81
DownloadVisualize
BU of 2n81 by Molmil
Solution Structure of Lipid Transfer Protein From Pea Pisum Sativum
Descriptor: Lipid Transfer Protein
Authors:Paramonov, A.S, Rumynskiy, E.I, Bogdanov, I.V, Finkina, E.I, Melnikova, D.N, Ovchinnikova, T.V, Shenkarev, Z.O, Arseniev, A.S.
Deposit date:2015-09-30
Release date:2016-05-11
Last modified:2017-12-20
Method:SOLUTION NMR
Cite:A novel lipid transfer protein from the pea Pisum sativum: isolation, recombinant expression, solution structure, antifungal activity, lipid binding, and allergenic properties.
BMC Plant Biol, 16
2J5D
DownloadVisualize
BU of 2j5d by Molmil
NMR structure of BNIP3 transmembrane domain in lipid bicelles
Descriptor: BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 3
Authors:Bocharov, E.V, Pustovalova, Y.E, Volynsky, P.E, Maslennikov, I.V, Goncharuk, M.V, Ermolyuk, Y.S, Arseniev, A.S.
Deposit date:2006-09-14
Release date:2007-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger.
J. Biol. Chem., 282, 2007
2JWM
DownloadVisualize
BU of 2jwm by Molmil
NMR spatial srtucture of ternary complex kalata B7/Mn2+/DPC micelle
Descriptor: Kalata-B7
Authors:Nadezhdin, K.D, Shenkarev, Z.O, Skjeldal, L, Arseniev, A.S.
Deposit date:2007-10-16
Release date:2008-03-11
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Divalent cation coordination and mode of membrane interaction in cyclotides: NMR spatial structure of ternary complex Kalata B7/Mn(2+)/DPC micelle
J.Inorg.Biochem., 102, 2008
2K1K
DownloadVisualize
BU of 2k1k by Molmil
NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 4.3
Descriptor: Ephrin type-A receptor 1
Authors:Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
Deposit date:2008-03-06
Release date:2008-09-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1
J.Biol.Chem., 283, 2008
2K1L
DownloadVisualize
BU of 2k1l by Molmil
NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 6.3
Descriptor: Ephrin type-A receptor 1
Authors:Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
Deposit date:2008-03-07
Release date:2008-09-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1.
J.Biol.Chem., 283, 2008
2JWA
DownloadVisualize
BU of 2jwa by Molmil
ErbB2 transmembrane segment dimer spatial structure
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Bocharov, E.V, Arseniev, A.S.
Deposit date:2007-10-09
Release date:2008-01-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Spatial Structure of the Dimeric Transmembrane Domain of the Growth Factor Receptor ErbB2 Presumably Corresponding to the Receptor Active State
J.Biol.Chem., 283, 2008
2JNI
DownloadVisualize
BU of 2jni by Molmil
Spatial structure of antimicrobial peptide arenicin-2 in aqueous solution
Descriptor: Arenicin-2
Authors:Ovchinnikova, T.V, Shenkarev, Z.O, Nadezhdin, K.D, Balandin, S.V, Zhmak, M.N, Kudelina, I.A, Finkina, E.I, Kokryakov, V.N, Arseniev, A.S.
Deposit date:2007-01-25
Release date:2007-08-07
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Recombinant expression, synthesis, purification, and solution structure of arenicin
Biochem.Biophys.Res.Commun., 360, 2007
2K9Y
DownloadVisualize
BU of 2k9y by Molmil
EphA2 dimeric structure in the lipidic bicelle at pH 5.0
Descriptor: Ephrin type-A receptor 2
Authors:Mayzel, M.L, Bocharov, E.V, Volynsky, P.E, Arseniev, A.S.
Deposit date:2008-10-27
Release date:2009-08-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Left-Handed Dimer of EphA2 Transmembrane Domain: Helix Packing Diversity among Receptor Tyrosine Kinases
Biophys.J., 98, 2010
2KS1
DownloadVisualize
BU of 2ks1 by Molmil
Heterodimeric association of Transmembrane domains of ErbB1 and ErbB2 receptors Enabling Kinase Activation
Descriptor: Epidermal growth factor receptor, Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Bocharov, E.V, Pustovalova, Y.E, Bocharova, O.V, Chupin, V.V, Arseniev, A.S.
Deposit date:2009-12-24
Release date:2010-06-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Spatial Structure of the Transmembrane Domain Heterodimer of ErbB1 and ErbB2 Receptor Tyrosine Kinases
J.Mol.Biol., 2010
2KPE
DownloadVisualize
BU of 2kpe by Molmil
Refined structure of Glycophorin A transmembrane segment dimer in DPC micelles
Descriptor: Glycophorin-A
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S, Volynsky, P.E, Efremov, R.G.
Deposit date:2009-10-13
Release date:2010-09-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dimeric structure of the transmembrane domain of glycophorin a in lipidic and detergent environments.
Acta Naturae, 3, 2011
2KTO
DownloadVisualize
BU of 2kto by Molmil
Spatial structure of Lch-beta peptide from two-component lantibiotic Lichenicidin VK21
Descriptor: LCHB
Authors:Mineev, K.S, Shenkarev, Z.O, Ovchinnikova, T.V, Arseniev, A.S.
Deposit date:2010-02-05
Release date:2010-07-21
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Isolation, Structure Elucidation, and Synergistic Antibacterial Activity of a Novel Two-Component Lantibiotic Lichenicidin from Bacillus Licheniformis Vk21.
Biochemistry, 49, 2010
2KPF
DownloadVisualize
BU of 2kpf by Molmil
Spatial structure of the dimeric transmembrane domain of glycophorin A in bicelles soluton
Descriptor: Glycophorin-A
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S, Volynsky, P.E, Efremov, R.G.
Deposit date:2009-10-13
Release date:2010-09-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dimeric structure of the transmembrane domain of glycophorin a in lipidic and detergent environments.
Acta Naturae, 3, 2011
2LCX
DownloadVisualize
BU of 2lcx by Molmil
Spatial Structure of the ErbB4 dimeric TM domain
Descriptor: Receptor tyrosine-protein kinase erbB-4
Authors:Mineev, K.S, Bocharov, E.V, Arseniev, A.S.
Deposit date:2011-05-11
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR.
Biochim.Biophys.Acta, 1818, 2012
2LLM
DownloadVisualize
BU of 2llm by Molmil
Structure of amyloid precursor protein's transmembrane domain
Descriptor: Amyloid beta A4 protein
Authors:Nadezhdin, K.D, Bocharova, O.V, Bocharov, E.V, Arseniev, A.S.
Deposit date:2011-11-15
Release date:2012-06-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamic study of the transmembrane domain of the amyloid precursor protein.
Acta Naturae, 3, 2011
2L2T
DownloadVisualize
BU of 2l2t by Molmil
Solution NMR structure of the ErbB4 dimeric membrane domain
Descriptor: Receptor tyrosine-protein kinase erbB-4
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S.
Deposit date:2010-08-27
Release date:2011-09-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR.
Biochim. Biophys. Acta, 1818, 2012
2L2R
DownloadVisualize
BU of 2l2r by Molmil
Helical hairpin structure of a novel antimicrobial peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli)
Descriptor: Antimicrobial peptide EcAMP1
Authors:Nolde, S.B, Barinov, N.A, Balashova, T.A, Arseniev, A.S, Vassilevski, A.A, Rogozhin, E.A, Egorov, T.A, Grishin, E.V.
Deposit date:2010-08-26
Release date:2011-05-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Disulfide-stabilized Helical Hairpin Structure and Activity of a Novel Antifungal Peptide EcAMP1 from Seeds of Barnyard Grass (Echinochloa crus-galli).
J.Biol.Chem., 286, 2011
2L03
DownloadVisualize
BU of 2l03 by Molmil
Spatial structure of water-soluble Lynx1
Descriptor: Ly-6/neurotoxin-like protein 1
Authors:Mineev, K.S, Shenkarev, Z.O, Arseniev, A.S.
Deposit date:2010-06-30
Release date:2011-01-19
Last modified:2014-10-01
Method:SOLUTION NMR
Cite:NMR structure and action on nicotinic acetylcholine receptors of water-soluble domain of human LYNX1
J.Biol.Chem., 286, 2011
2L3I
DownloadVisualize
BU of 2l3i by Molmil
Oxki4a, spider derived antimicrobial peptide
Descriptor: AOXKI4A, antimicrobial peptide in spider venom
Authors:Vassilevski, A.A, Dubovskii, P.V, Samsonova, O.V, Egorova, N.S, Kozlov, S.A, Feofanov, A.V, Arseniev, A.S, Grishin, E.V.
Deposit date:2010-09-14
Release date:2011-09-14
Last modified:2019-05-15
Method:SOLUTION NMR
Cite:Novel lynx spider toxin shares common molecular architecture with defense peptides from frog skin.
Febs J., 278, 2011

219869

数据于2024-05-15公开中

PDB statisticsPDBj update infoContact PDBjnumon