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7Q5P
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BU of 7q5p by Molmil
Structure of VgrG1 from Pseudomonas protegens.
Descriptor: Type VI secretion protein VgrG
Authors:Guenther, P, Quentin, D, Ahmad, S, Sachar, K, Gatsogiannis, C, Whitney, J.C, Raunser, S.
Deposit date:2021-11-04
Release date:2021-12-15
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a bacterial Rhs effector exported by the type VI secretion system.
Plos Pathog., 18, 2022
7Q97
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BU of 7q97 by Molmil
Structure of the bacterial type VI secretion system effector RhsA.
Descriptor: Rhs family protein
Authors:Guenther, P, Quentin, D, Ahmad, S, Sachar, K, Gatsogiannis, C, Whitney, J.C, Raunser, S.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a bacterial Rhs effector exported by the type VI secretion system.
Plos Pathog., 18, 2022
5J61
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BU of 5j61 by Molmil
D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Descriptor: 3'-deoxy-3'-(glycylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Routh, S.B, Ahmad, S, Sankaranarayanan, R.
Deposit date:2016-04-04
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elongation Factor Tu Prevents Misediting of Gly-tRNA(Gly) Caused by the Design Behind the Chiral Proofreading Site of D-Aminoacyl-tRNA Deacylase
Plos Biol., 14, 2016
7JL2
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BU of 7jl2 by Molmil
Cryo-EM structure of MDA5-dsRNA filament in complex with TRIM65 PSpry domain (Trimer)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
Authors:Kato, K, Ahmad, S, Hur, S.
Deposit date:2020-07-29
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
7JL3
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BU of 7jl3 by Molmil
Cryo-EM structure of RIG-I:dsRNA filament in complex with RIPLET PrySpry domain (trimer)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ...
Authors:Kato, K, Ahmad, S, Hur, S.
Deposit date:2020-07-29
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
7JL0
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BU of 7jl0 by Molmil
Cryo-EM structure of MDA5-dsRNA in complex with TRIM65 PSpry domain (Monomer)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
Authors:Kato, K, Ahmad, S, Hur, S.
Deposit date:2020-07-29
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
7JL1
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BU of 7jl1 by Molmil
Cryo-EM structure of RIG-I:dsRNA in complex with RIPLET PrySpry domain (monomer)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ...
Authors:Kato, K, Ahmad, S, Hur, S.
Deposit date:2020-07-29
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
7JL4
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BU of 7jl4 by Molmil
Crystal structure of TRIM65 PSpry domain
Descriptor: GLYCEROL, Tripartite motif-containing protein 65
Authors:Kato, K, Ahmad, S, Hur, S.
Deposit date:2020-07-29
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
8T55
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BU of 8t55 by Molmil
Co-crystal structure of the WD-repeat domain of human WDR91 in complex with MR46654
Descriptor: 1,2-ETHANEDIOL, N-[3-(4-chlorophenyl)oxetan-3-yl]-1-propanoyl-1,2,3,4-tetrahydroquinoline-5-carboxamide, WD repeat-containing protein 91
Authors:Ahmad, H, Zeng, H, Dong, A, Li, Y, Yen, H, Seitova, A, Xu, J, Feng, J.W, Brown, P.J, Santhakumar, V, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-06-12
Release date:2023-07-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning.
J.Med.Chem., 66, 2023
8SHJ
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BU of 8shj by Molmil
Crystal structure of the WD-repeat domain of human WDR91 in complex with MR45279
Descriptor: N-[3-(4-chlorophenyl)oxetan-3-yl]-4-[(3S)-3-hydroxypyrrolidin-1-yl]benzamide, WD repeat-containing protein 91
Authors:Ahmad, H, Zeng, H, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Xu, J, Feng, J.W, Brown, P.J, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-04-14
Release date:2023-07-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning.
J.Med.Chem., 66, 2023
6VYC
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BU of 6vyc by Molmil
Crystal structure of WD-repeat domain of human WDR91
Descriptor: UNKNOWN ATOM OR ION, WD repeat-containing protein 91
Authors:Halabelian, L, Hutchinson, A, Li, Y, Seitova, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2020-02-26
Release date:2020-03-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning.
J.Med.Chem., 66, 2023
6OTT
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BU of 6ott by Molmil
Structure of PurF in complex with ppApp
Descriptor: Amidophosphoribosyltransferase, PurF, MAGNESIUM ION, ...
Authors:Grant, R.A, Wang, B, Laub, M.T.
Deposit date:2019-05-03
Release date:2019-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp.
Nature, 575, 2019
5HV9
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BU of 5hv9 by Molmil
Human LTC4S mutant-S36E
Descriptor: GLUTATHIONE, Leukotriene C4 synthase, SULFATE ION
Authors:Thulasingam, M, Ahmad, H.R.S, Rinaldo-Matthis, A, Haeggstrom, J.Z.
Deposit date:2016-01-28
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Phosphorylation of Leukotriene C4 Synthase at Serine 36 Impairs Catalytic Activity.
J.Biol.Chem., 291, 2016
3D2B
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BU of 3d2b by Molmil
Structure of 2D9, a thermostable mutant of Bacillus subtilis lipase obtained through directed evolution
Descriptor: Lipase
Authors:Sankaranarayanan, R, Kamal, M.Z.
Deposit date:2008-05-08
Release date:2008-06-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thermostable Bacillus subtilis lipases: in vitro evolution and structural insight
J.Mol.Biol., 381, 2008
3D2A
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BU of 3d2a by Molmil
Structure of 1-17A4, a thermostable mutant of Bacillus subtilis lipase obtained through directed evolution
Descriptor: Lipase
Authors:Sankaranarayanan, R, Kamal, M.Z.
Deposit date:2008-05-08
Release date:2008-06-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Thermostable Bacillus subtilis lipases: in vitro evolution and structural insight
J.Mol.Biol., 381, 2008
3D2C
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BU of 3d2c by Molmil
Structure of 4D3, a thermostable mutant of Bacillus subtilis lipase obtained through directed evolution
Descriptor: Lipase
Authors:Sankaranarayanan, R, Kamal, M.Z.
Deposit date:2008-05-08
Release date:2008-06-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Thermostable Bacillus subtilis lipases: in vitro evolution and structural insight
J.Mol.Biol., 381, 2008
4RRQ
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BU of 4rrq by Molmil
K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi with L-Ser3AA
Descriptor: SERINE-3'-AMINOADENOSINE, Threonine--tRNA ligase
Authors:Hussain, T, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRR
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BU of 4rrr by Molmil
K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi with L-Thr3AA
Descriptor: 3'-deoxy-3'-(L-threonylamino)adenosine, Threonine--tRNA ligase
Authors:Hussain, T, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
2QXT
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BU of 2qxt by Molmil
Crystal Structure Analysis of the Bacillus subtilis lipase crystallized at pH 4.5
Descriptor: Lipase
Authors:Rajakumara, E, Sankaranarayanan, R.
Deposit date:2007-08-13
Release date:2007-12-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the remarkable stability of Bacillus subtilis lipase (Lip A) at low pH
Biochim.Biophys.Acta, 1784, 2008
5MDN
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BU of 5mdn by Molmil
Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis
Descriptor: DNA polymerase, MAGNESIUM ION
Authors:Guo, J, Zhang, W, Coker, A.R, Wood, S.P, Cooper, J.B, Rashid, N, Akhtar, M.
Deposit date:2016-11-12
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Acta Crystallogr D Struct Biol, 73, 2017
5MIO
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BU of 5mio by Molmil
KIF2C-DARPIN FUSION PROTEIN BOUND TO TUBULIN
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF2C,KIF2C FUSED TO A DARPIN,KIF2C FUSED TO A DARPIN, ...
Authors:Wang, W, Gigant, B.
Deposit date:2016-11-28
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Insight into microtubule disassembly by kinesin-13s from the structure of Kif2C bound to tubulin.
Nat Commun, 8, 2017
6H3L
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BU of 6h3l by Molmil
Structure of VgrG1 in the Type VI secretion "pre-firing" VgrG1-Tse6-EagT6-EF-Tu-Tsi6 complex
Descriptor: VgrG1
Authors:Quentin, D, Raunser, S.
Deposit date:2018-07-19
Release date:2018-09-12
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Mechanism of loading and translocation of type VI secretion system effector Tse6.
Nat Microbiol, 3, 2018
2QXU
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BU of 2qxu by Molmil
Crystal Structure Analysis of the Bacillus subtilis lipase crystallized at pH 5.0
Descriptor: Lipase
Authors:Rajakumara, E, Sankaranarayanan, R.
Deposit date:2007-08-13
Release date:2007-12-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the remarkable stability of Bacillus subtilis lipase (Lip A) at low pH
Biochim.Biophys.Acta, 1784, 2008
8QK5
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BU of 8qk5 by Molmil
Structure of K. pneumoniae LpxH in complex with EBL-3647
Descriptor: 5-[[3-(aminomethyl)azetidin-1-yl]methyl]-N-[4-[4-(4-cyano-6-methyl-pyrimidin-2-yl)piperazin-1-yl]sulfonylphenyl]-2-[methyl(methylsulfonyl)amino]benzamide, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
Authors:Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
Deposit date:2023-09-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QK2
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BU of 8qk2 by Molmil
Structure of K.pneumoniae LpxH in complex with EBL-3339
Descriptor: MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase, ~{N}-[4-[4-(4-cyano-6-methyl-pyrimidin-2-yl)piperazin-1-yl]sulfonylphenyl]-2-[methyl(methylsulfonyl)amino]benzamide
Authors:Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
Deposit date:2023-09-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024

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