3J27
| CryoEM structure of Dengue virus | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ... | Authors: | Zhang, X, Ge, P, Yu, X, Brannan, J.M, Bi, G, Zhang, Q, Schein, S, Zhou, Z.H. | Deposit date: | 2012-09-26 | Release date: | 2012-12-19 | Last modified: | 2020-07-29 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Cryo-EM structure of the mature dengue virus at 3.5-A resolution. Nat.Struct.Mol.Biol., 20, 2012
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3J4U
| A new topology of the HK97-like fold revealed in Bordetella bacteriophage: non-covalent chainmail secured by jellyrolls | Descriptor: | cementing protein, major capsid protein | Authors: | Zhang, X, Guo, H, Jin, L, Czornyj, E, Hodes, A, Hui, W.H, Nieh, A.W, Miller, J.F, Zhou, Z.H. | Deposit date: | 2013-10-09 | Release date: | 2013-12-25 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 A resolution. Elife, 2, 2013
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3JB2
| Atomic model of cytoplasmic polyhedrosis virus with SAM and GTP | Descriptor: | Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. | Deposit date: | 2015-07-06 | Release date: | 2015-08-12 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
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3J2V
| CryoEM structure of HBV core | Descriptor: | PreC/core protein | Authors: | Yu, X, Jin, L, Jih, J, Shih, C, Zhou, Z.H. | Deposit date: | 2013-01-11 | Release date: | 2013-10-02 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | 3.5 angstrom cryoEM Structure of Hepatitis B Virus Core Assembled from Full-Length Core Protein. Plos One, 8, 2013
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3J9R
| Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states | Descriptor: | sheath | Authors: | Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H. | Deposit date: | 2015-02-17 | Release date: | 2015-04-01 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states. Nat.Struct.Mol.Biol., 22, 2015
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3JAY
| Atomic model of transcribing cytoplasmic polyhedrosis virus | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, ... | Authors: | Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. | Deposit date: | 2015-07-06 | Release date: | 2015-08-12 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3 Å) | Cite: | A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
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3JB1
| Atomic model of cytoplasmic polyhedrosis virus with SAM | Descriptor: | Capsid protein VP1, S-ADENOSYLMETHIONINE, Structural protein VP3, ... | Authors: | Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. | Deposit date: | 2015-07-06 | Release date: | 2015-08-12 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
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3J9Q
| Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states | Descriptor: | sheath, tube | Authors: | Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H. | Deposit date: | 2015-02-17 | Release date: | 2015-04-01 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states. Nat.Struct.Mol.Biol., 22, 2015
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3JB5
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3J9D
| Atomic structure of a non-enveloped virus reveals pH sensors for a coordinated process of cell entry | Descriptor: | Outer capsid protein VP2, ZINC ION | Authors: | Zhang, X, Patel, A, Celma, C, Roy, P, Zhou, Z.H. | Deposit date: | 2015-01-09 | Release date: | 2015-12-09 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Atomic model of a nonenveloped virus reveals pH sensors for a coordinated process of cell entry. Nat.Struct.Mol.Biol., 23, 2016
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3JB3
| Atomic model of cytoplasmic polyhedrosis virus with SAM, GTP and ATP | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, ... | Authors: | Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. | Deposit date: | 2015-07-06 | Release date: | 2015-08-12 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
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3J2P
| CryoEM structure of Dengue virus envelope protein heterotetramer | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ... | Authors: | Zhang, X, Ge, P, Yu, X, Brannan, J.M, Bi, G, Zhang, Q, Schein, S, Zhou, Z.H. | Deposit date: | 2012-11-30 | Release date: | 2012-12-19 | Last modified: | 2020-07-29 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Cryo-EM structure of the mature dengue virus at 3.5-A resolution. Nat.Struct.Mol.Biol., 20, 2012
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7UWS
| Atomic model of the partial VSV nucleocapsid | Descriptor: | Matrix protein, Nucleoprotein, RNA | Authors: | Zhou, K, Si, Z, Ge, P, Tsao, J, Luo, M, Zhou, Z.H. | Deposit date: | 2022-05-03 | Release date: | 2022-09-28 | Last modified: | 2022-10-26 | Method: | ELECTRON MICROSCOPY (3.47 Å) | Cite: | Atomic model of vesicular stomatitis virus and mechanism of assembly. Nat Commun, 13, 2022
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6M5S
| The coordinates of the apo hexameric terminase complex | Descriptor: | Tripartite terminase subunit 1, Tripartite terminase subunit 2, Tripartite terminase subunit 3, ... | Authors: | Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. | Deposit date: | 2020-03-11 | Release date: | 2020-10-28 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
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6M5T
| The coordinate of the nuclease domain of the apo terminase complex | Descriptor: | Tripartite terminase subunit 3 | Authors: | Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. | Deposit date: | 2020-03-11 | Release date: | 2020-10-28 | Last modified: | 2023-11-29 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
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6M5R
| The coordinates of the apo monomeric terminase complex | Descriptor: | Tripartite terminase subunit 1, Tripartite terminase subunit 2, Tripartite terminase subunit 3, ... | Authors: | Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. | Deposit date: | 2020-03-11 | Release date: | 2020-10-28 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
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6M5V
| The coordinate of the hexameric terminase complex in the presence of the ADP-BeF3 | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... | Authors: | Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. | Deposit date: | 2020-03-11 | Release date: | 2020-10-28 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (4.5 Å) | Cite: | Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
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6NSJ
| CryoEM structure of Helicobacter pylori urea channel in closed state | Descriptor: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel | Authors: | Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H. | Deposit date: | 2019-01-24 | Release date: | 2019-04-03 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM. Sci Adv, 5, 2019
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6NSK
| CryoEM structure of Helicobacter pylori urea channel in open state. | Descriptor: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel | Authors: | Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H. | Deposit date: | 2019-01-24 | Release date: | 2019-04-03 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM. Sci Adv, 5, 2019
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6M5U
| The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3 | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... | Authors: | Yang, Y.X, Yang, P, Wang, N, Zhu, L, Zhou, Z.H, Rao, Z.H, Wang, X.X. | Deposit date: | 2020-03-11 | Release date: | 2020-10-28 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
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7WHP
| Pentameric turret of Bombyx mori cytoplasmic polyhedrosis virus after spike detaches. | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE, Structural protein VP3 | Authors: | Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H. | Deposit date: | 2021-12-31 | Release date: | 2022-02-02 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.7 Å) | Cite: | Multiple conformations of trimeric spikes visualized on a non-enveloped virus. Nat Commun, 13, 2022
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7WHM
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7WHN
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7CTH
| Cryo-EM structure of dengue virus serotype 2 in complex with the scFv fragment of the broadly neutralizing antibody EDE1 C10 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Core protein, Single Chain Variable Fragment | Authors: | Zhang, X, Sharma, A, Duquerroy, S, Zhou, Z.H, Rey, F.A. | Deposit date: | 2020-08-19 | Release date: | 2021-12-01 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses. Cell, 184, 2021
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6ODM
| Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit | Descriptor: | Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ... | Authors: | Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H. | Deposit date: | 2019-03-26 | Release date: | 2019-06-19 | Last modified: | 2019-12-18 | Method: | ELECTRON MICROSCOPY (4.3 Å) | Cite: | Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome. Nature, 570, 2019
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