Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6AEI
DownloadVisualize
BU of 6aei by Molmil
Cryo-EM structure of the receptor-activated TRPC5 ion channel
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Duan, J, Li, Z, Li, J, Zhang, J.
Deposit date:2018-08-05
Release date:2019-08-07
Last modified:2019-08-14
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM structure of TRPC5 at 2.8- angstrom resolution reveals unique and conserved structural elements essential for channel function.
Sci Adv, 5, 2019
3GGQ
DownloadVisualize
BU of 3ggq by Molmil
Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction
Descriptor: BROMIDE ION, Capsid protein
Authors:Li, S.W, Tang, X.H, Seetharaman, J, Yang, C.Y, Gu, Y, Zhang, J, Du, H.L, Shih, J.W.K, Hew, C.L, Sivaraman, J, Xia, N.S.
Deposit date:2009-03-02
Release date:2009-08-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dimerization of hepatitis E virus capsid protein E2s domain is essential for virus-host interaction
Plos Pathog., 5, 2009
4NTJ
DownloadVisualize
BU of 4ntj by Molmil
Structure of the human P2Y12 receptor in complex with an antithrombotic drug
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, P2Y purinoceptor 12,Soluble cytochrome b562,P2Y purinoceptor 12, ...
Authors:Zhang, K, Zhang, J, Gao, Z.-G, Zhang, D, Zhu, L, Han, G.W, Moss, S.M, Paoletta, S, Kiselev, E, Lu, W, Fenalti, G, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
Deposit date:2013-12-02
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structure of the human P2Y12 receptor in complex with an antithrombotic drug
Nature, 509, 2014
7MRL
DownloadVisualize
BU of 7mrl by Molmil
Structure of HIV-1 matrix domain bound to human tRNALys3
Descriptor: HIV-1 matrix domain, MAGNESIUM ION, tRNA Lys3
Authors:Bou-Nader, C, Zhang, J.
Deposit date:2021-05-07
Release date:2021-08-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:HIV-1 matrix-tRNA complex structure reveals basis for host control of Gag localization.
Cell Host Microbe, 29, 2021
2L6K
DownloadVisualize
BU of 2l6k by Molmil
Solution Structure of a Nonphosphorylated Peptide Recognizing Domain
Descriptor: Tensin-like C1 domain-containing phosphatase
Authors:Dai, K, Liao, S, Zhang, J, Zhang, X, Tu, X.
Deposit date:2010-11-22
Release date:2011-10-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Tensin2 SH2 domain and its phosphotyrosine-independent interaction with DLC-1
Plos One, 6, 2011
7R81
DownloadVisualize
BU of 7r81 by Molmil
Structure of the translating Neurospora crassa ribosome arrested by cycloheximide
Descriptor: 18S rRNA, 26S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Shen, L, Su, Z, Yang, K, Wu, C, Becker, T, Bell-Pedersen, D, Zhang, J, Sachs, M.S.
Deposit date:2021-06-25
Release date:2021-12-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of the translating Neurospora ribosome arrested by cycloheximide
Proc.Natl.Acad.Sci.USA, 118, 2021
2I7K
DownloadVisualize
BU of 2i7k by Molmil
Solution Structure of the Bromodomain of Human BRD7 Protein
Descriptor: Bromodomain-containing protein 7
Authors:Sun, H, Liu, J, Zhang, J, Huang, H, Wu, J, Shi, Y.
Deposit date:2006-08-31
Release date:2007-07-10
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of BRD7 bromodomain and its interaction with acetylated peptides from histone H3 and H4
Biochem.Biophys.Res.Commun., 358, 2007
6UFM
DownloadVisualize
BU of 6ufm by Molmil
Cocrystal Structure of the Nocardia farcinica ileS T-box riboswitch in complex with its cognate tRNA
Descriptor: RNA (77-MER), RNA (98-MER), SULFATE ION
Authors:Suddala, K.C, Zhang, J.
Deposit date:2019-09-24
Release date:2019-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:High-affinity recognition of specific tRNAs by an mRNA anticodon-binding groove.
Nat.Struct.Mol.Biol., 26, 2019
3EMN
DownloadVisualize
BU of 3emn by Molmil
The Crystal Structure of Mouse VDAC1 at 2.3 A resolution
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Voltage-dependent anion-selective channel protein 1
Authors:Ujwal, R, Cascio, D, Colletier, J.-P, Faham, S, Zhang, J, Toro, L, Ping, P, Abramson, J.
Deposit date:2008-09-24
Release date:2008-12-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating
Proc.Natl.Acad.Sci.USA, 105, 2008
2JXN
DownloadVisualize
BU of 2jxn by Molmil
Solution Structure of S. cerevisiae PDCD5-like Protein Ymr074cp
Descriptor: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, Uncharacterized protein YMR074C
Authors:Hong, J, Zhang, J, Liu, Z, Shi, Y, Wu, J.
Deposit date:2007-11-23
Release date:2008-12-02
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of S. cerevisiae PDCD5-like Protein Ymr074cp Determined by Heteronuclear NMR Spectroscopy
To be Published
5Z6P
DownloadVisualize
BU of 5z6p by Molmil
The crystal structure of an agarase, AgWH50C
Descriptor: B-agarase
Authors:Mao, X, Zhou, J, Zhang, P, Zhang, L, Zhang, J, Li, Y.
Deposit date:2018-01-24
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Structure-based design of agarase AgWH50C from Agarivorans gilvus WH0801 to enhance thermostability.
Appl. Microbiol. Biotechnol., 103, 2019
7C2Y
DownloadVisualize
BU of 7c2y by Molmil
The crystal structure of COVID-2019 main protease in the apo state
Descriptor: 3C-like proteinase
Authors:Zhou, X.L, Zhong, F.L, Lin, C, Zhou, H, Hu, X.H, Wang, Q.S, Li, J, Zhang, J.
Deposit date:2020-05-10
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:COVID-2019 main protease in the apo state
To Be Published
6VXN
DownloadVisualize
BU of 6vxn by Molmil
Cryo-EM structure of Arabidopsis thaliana MSL1 A320V
Descriptor: DODECANE, Mechanosensitive ion channel protein 1, mitochondrial
Authors:Deng, Z, Zhang, J, Yuan, P.
Deposit date:2020-02-22
Release date:2020-08-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural mechanism for gating of a eukaryotic mechanosensitive channel of small conductance.
Nat Commun, 11, 2020
6VXM
DownloadVisualize
BU of 6vxm by Molmil
Cryo-EM structure of Arabidopsis thaliana MSL1
Descriptor: EICOSANE, Mechanosensitive ion channel protein 1, mitochondrial
Authors:Deng, Z, Zhang, J, Yuan, P.
Deposit date:2020-02-22
Release date:2020-08-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural mechanism for gating of a eukaryotic mechanosensitive channel of small conductance.
Nat Commun, 11, 2020
6JPD
DownloadVisualize
BU of 6jpd by Molmil
Mouse receptor-interacting protein kinase 3 (RIP3) amyloid structure by solid-state NMR
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Wu, X.L, Hu, H, Zhang, J, Dong, X.Q, Wang, J, Schwieters, C, Wang, H.Y, Lu, J.X.
Deposit date:2019-03-26
Release date:2020-10-28
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis.
Nat Commun, 12, 2021
6VXP
DownloadVisualize
BU of 6vxp by Molmil
Cryo-EM structure of Arabidopsis thaliana MSL1 in lipid nanodisc
Descriptor: Mechanosensitive ion channel protein 1, mitochondrial
Authors:Deng, Z, Zhang, J, Yuan, P.
Deposit date:2020-02-22
Release date:2020-08-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural mechanism for gating of a eukaryotic mechanosensitive channel of small conductance.
Nat Commun, 11, 2020
2M80
DownloadVisualize
BU of 2m80 by Molmil
Solution structure of yeast dithiol glutaredoxin Grx8
Descriptor: Glutaredoxin-8
Authors:Tang, Y, Zhang, J, Yu, J, Wu, J, Zhou, C.Z, Shi, Y.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure-guided activity enhancement and catalytic mechanism of yeast grx8
Biochemistry, 53, 2014
3IZJ
DownloadVisualize
BU of 3izj by Molmil
Mm-cpn rls with ATP and AlFx
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZL
DownloadVisualize
BU of 3izl by Molmil
Mm-cpn rls deltalid with ATP and AlFx
Descriptor: Mm-cpn rls deltalid
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZN
DownloadVisualize
BU of 3izn by Molmil
Mm-cpn deltalid with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZI
DownloadVisualize
BU of 3izi by Molmil
Mm-cpn rls with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZH
DownloadVisualize
BU of 3izh by Molmil
Mm-cpn D386A with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZM
DownloadVisualize
BU of 3izm by Molmil
Mm-cpn wildtype with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZK
DownloadVisualize
BU of 3izk by Molmil
Mm-cpn rls deltalid with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
8H91
DownloadVisualize
BU of 8h91 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with nanobody N19
Descriptor: Spike protein S1, nanobody
Authors:Zhang, Y.T, Li, J, Zhang, J.
Deposit date:2022-10-24
Release date:2023-11-01
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with nanobody N19
To Be Published

219869

数据于2024-05-15公开中

PDB statisticsPDBj update infoContact PDBjnumon