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4FYB
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Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
分子名称: GLYCEROL, Thiol:disulfide interchange protein (DsbC)
著者Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
登録日2012-07-04
公開日2013-05-08
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
4FYC
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Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
分子名称: TETRAETHYLENE GLYCOL, Thiol:disulfide interchange protein (DsbC)
著者Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
登録日2012-07-04
公開日2013-05-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
6JKG
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BU of 6jkg by Molmil
The NAD+-free form of human NSDHL
分子名称: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
著者Kim, D, Lee, S.J, Lee, B.
登録日2019-02-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.
Cell.Mol.Life Sci., 78, 2021
6JKH
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BU of 6jkh by Molmil
The NAD+-bound form of human NSDHL
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
著者Kim, D, Lee, S.J, Lee, B.
登録日2019-02-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.
Cell.Mol.Life Sci., 78, 2021
7CC7
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BU of 7cc7 by Molmil
Tetratricopeptide repeat (TPR) domain of protein tyrosine phosphatase-interacting protein 51 (PTPIP51)
分子名称: GLYCEROL, PARA-TOLUENE SULFONATE, Regulator of microtubule dynamics protein 3
著者Lee, B.I, Park, T.H, Yeo, H.K.
登録日2020-06-16
公開日2021-01-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Phospholipid transfer function of PTPIP51 at mitochondria-associated ER membranes.
Embo Rep., 22, 2021
6LTY
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BU of 6lty by Molmil
DNA bound antitoxin HigA3
分子名称: DNA (5'-D(P*CP*CP*AP*CP*GP*AP*GP*AP*TP*AP*TP*AP*AP*CP*CP*TP*AP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*TP*AP*GP*GP*TP*TP*AP*TP*AP*TP*CP*TP*CP*GP*TP*GP*G)-3'), Putative antitoxin HigA3
著者Park, J.Y, Lee, B.J.
登録日2020-01-23
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
6LTZ
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BU of 6ltz by Molmil
Induced DNA bending by unique dimerization of HigA antitoxin
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Park, J.Y, Lee, B.J.
登録日2020-01-23
公開日2020-07-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.973 Å)
主引用文献Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
2QI2
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BU of 2qi2 by Molmil
Crystal structure of the Thermoplasma acidophilum Pelota protein
分子名称: Cell division protein pelota related protein
著者Lee, H.H, Kim, Y.S, Kim, K.H, Heo, I.H, Kim, S.K, Kim, O, Suh, S.W.
登録日2007-07-03
公開日2007-10-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional insights into dom34, a key component of no-go mRNA decay
Mol.Cell, 27, 2007
5GTO
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BU of 5gto by Molmil
Human PPARgamma ligand binding dmain complexed with S35
分子名称: 2-[4-[5-[(1~{S})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, GLYCEROL, MYRISTIC ACID, ...
著者Jang, J.Y, Suh, S.W.
登録日2016-08-22
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5GTP
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BU of 5gtp by Molmil
The agonist-free structure of human PPARgamma ligand binding domain in the presence of the SRC-1 coactivator peptide
分子名称: GLYCEROL, MYRISTIC ACID, Nuclear receptor coactivator 1, ...
著者Jang, J.Y, Suh, S.W.
登録日2016-08-23
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5GTN
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Human PPARgamma ligand binding dmain complexed with R35
分子名称: 2-[4-[5-[(1~{R})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Suh, S.W.
登録日2016-08-22
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5HS9
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BU of 5hs9 by Molmil
Crystal structure of the quinone-bound YodB from B. subtilis
分子名称: HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS7
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Reduced form of the transcriptional regulator YodB from B. subtilis
分子名称: GLYCEROL, HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS8
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BU of 5hs8 by Molmil
Crystal structure of the diamide-treated YodB from B. subtilis
分子名称: HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
3SWE
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BU of 3swe by Molmil
Haemophilus influenzae MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys117
分子名称: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, GLYCEROL, SULFATE ION, ...
著者Zhu, J.-Y, Schonbrunn, E.
登録日2011-07-13
公開日2012-03-14
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
J.Biol.Chem., 287, 2012
4N9I
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BU of 4n9i by Molmil
Crystal Structure of Transcription regulation protein CRP complexed with cGMP
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, Catabolite gene activator
著者Lee, B.-J, Seok, S.-H, Im, H, Yoon, H.-J.
登録日2013-10-21
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structures of inactive CRP species reveal the atomic details of the allosteric transition that discriminates cyclic nucleotide second messengers.
Acta Crystallogr.,Sect.D, 70, 2014
2GJN
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BU of 2gjn by Molmil
crystal structure of 2-nitropropane dioxygenase complexed with FMN and substrate
分子名称: 2-NITROPROPANE, FLAVIN MONONUCLEOTIDE, hypothetical protein PA1024
著者Suh, S.W.
登録日2006-03-31
公開日2006-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of 2-Nitropropane Dioxygenase Complexed with FMN and Substrate: identification of the catalytic base
J.Biol.Chem., 281, 2006
2GJL
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BU of 2gjl by Molmil
Crystal Structure of 2-nitropropane dioxygenase
分子名称: FLAVIN MONONUCLEOTIDE, hypothetical protein PA1024
著者Suh, S.W.
登録日2006-03-31
公開日2006-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of 2-Nitropropane Dioxygenase Complexed with FMN and Substrate: identification of the catalytic base
J.Biol.Chem., 281, 2006
7EC1
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BU of 7ec1 by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2021-03-24
最終更新日2022-10-12
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC3
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Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
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Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC7
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Crystal structure of SdgB (complexed with phosphate ions)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EWJ
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BU of 7ewj by Molmil
Toxin-antitoxin complex from Staphylococcus aureus
分子名称: Endoribonuclease MazF, GLYCEROL, PemI inhibitor, ...
著者Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
登録日2021-05-25
公開日2022-02-16
最終更新日2022-03-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7EWI
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Toxin protein from Staphylococcus aureus
分子名称: Endoribonuclease MazF, GLYCEROL, PHOSPHATE ION
著者Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
登録日2021-05-25
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
6IFM
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BU of 6ifm by Molmil
Crystal structure of DNA bound VapBC from Salmonella typhimurium
分子名称: Antitoxin VapB, DNA backward (27-MER), DNA forward (27-MER), ...
著者Park, D.W, Lee, B.J.
登録日2018-09-20
公開日2020-01-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease.
Faseb J., 34, 2020

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