Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2QI2
DownloadVisualize
BU of 2qi2 by Molmil
Crystal structure of the Thermoplasma acidophilum Pelota protein
Descriptor: Cell division protein pelota related protein
Authors:Lee, H.H, Kim, Y.S, Kim, K.H, Heo, I.H, Kim, S.K, Kim, O, Suh, S.W.
Deposit date:2007-07-03
Release date:2007-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional insights into dom34, a key component of no-go mRNA decay
Mol.Cell, 27, 2007
4FYB
DownloadVisualize
BU of 4fyb by Molmil
Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
Descriptor: GLYCEROL, Thiol:disulfide interchange protein (DsbC)
Authors:Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
Deposit date:2012-07-04
Release date:2013-05-08
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
4FYC
DownloadVisualize
BU of 4fyc by Molmil
Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
Descriptor: TETRAETHYLENE GLYCOL, Thiol:disulfide interchange protein (DsbC)
Authors:Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
Deposit date:2012-07-04
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
5GTO
DownloadVisualize
BU of 5gto by Molmil
Human PPARgamma ligand binding dmain complexed with S35
Descriptor: 2-[4-[5-[(1~{S})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, GLYCEROL, MYRISTIC ACID, ...
Authors:Jang, J.Y, Suh, S.W.
Deposit date:2016-08-22
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5GTP
DownloadVisualize
BU of 5gtp by Molmil
The agonist-free structure of human PPARgamma ligand binding domain in the presence of the SRC-1 coactivator peptide
Descriptor: GLYCEROL, MYRISTIC ACID, Nuclear receptor coactivator 1, ...
Authors:Jang, J.Y, Suh, S.W.
Deposit date:2016-08-23
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5GTN
DownloadVisualize
BU of 5gtn by Molmil
Human PPARgamma ligand binding dmain complexed with R35
Descriptor: 2-[4-[5-[(1~{R})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y, Suh, S.W.
Deposit date:2016-08-22
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
4Z9E
DownloadVisualize
BU of 4z9e by Molmil
Alba from Thermoplasma volcanium
Descriptor: DNA/RNA-binding protein Alba
Authors:Ma, C, Lee, S.J, Pathak, C, Lee, B.J.
Deposit date:2015-04-10
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Alba from Thermoplasma volcanium belongs to alpha-NAT's: An insight into the structural aspects of Tv Alba and its acetylation by Tv Ard1.
Arch.Biochem.Biophys., 590, 2016
5HS9
DownloadVisualize
BU of 5hs9 by Molmil
Crystal structure of the quinone-bound YodB from B. subtilis
Descriptor: HTH-type transcriptional regulator YodB
Authors:Lee, S.J, Lee, I.G, Lee, B.J.
Deposit date:2016-01-25
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS7
DownloadVisualize
BU of 5hs7 by Molmil
Reduced form of the transcriptional regulator YodB from B. subtilis
Descriptor: GLYCEROL, HTH-type transcriptional regulator YodB
Authors:Lee, S.J, Lee, I.G, Lee, B.J.
Deposit date:2016-01-25
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS8
DownloadVisualize
BU of 5hs8 by Molmil
Crystal structure of the diamide-treated YodB from B. subtilis
Descriptor: HTH-type transcriptional regulator YodB
Authors:Lee, S.J, Lee, I.G, Lee, B.J.
Deposit date:2016-01-25
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
7EWI
DownloadVisualize
BU of 7ewi by Molmil
Toxin protein from Staphylococcus aureus
Descriptor: Endoribonuclease MazF, GLYCEROL, PHOSPHATE ION
Authors:Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
Deposit date:2021-05-25
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7EWJ
DownloadVisualize
BU of 7ewj by Molmil
Toxin-antitoxin complex from Staphylococcus aureus
Descriptor: Endoribonuclease MazF, GLYCEROL, PemI inhibitor, ...
Authors:Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
Deposit date:2021-05-25
Release date:2022-02-16
Last modified:2022-03-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7ERR
DownloadVisualize
BU of 7err by Molmil
Tunnel-redesigned O2-tolerant CO dehydrogenase for removal of CO in real flue gas (Aerobic ChCODH2 A559W mutant)
Descriptor: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Heo, Y.Y, Kim, S.M.
Deposit date:2021-05-06
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022
4N9I
DownloadVisualize
BU of 4n9i by Molmil
Crystal Structure of Transcription regulation protein CRP complexed with cGMP
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Catabolite gene activator
Authors:Lee, B.-J, Seok, S.-H, Im, H, Yoon, H.-J.
Deposit date:2013-10-21
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structures of inactive CRP species reveal the atomic details of the allosteric transition that discriminates cyclic nucleotide second messengers.
Acta Crystallogr.,Sect.D, 70, 2014
6JKH
DownloadVisualize
BU of 6jkh by Molmil
The NAD+-bound form of human NSDHL
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Authors:Kim, D, Lee, S.J, Lee, B.
Deposit date:2019-02-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.
Cell.Mol.Life Sci., 78, 2021
6JKG
DownloadVisualize
BU of 6jkg by Molmil
The NAD+-free form of human NSDHL
Descriptor: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Authors:Kim, D, Lee, S.J, Lee, B.
Deposit date:2019-02-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.
Cell.Mol.Life Sci., 78, 2021
6LTY
DownloadVisualize
BU of 6lty by Molmil
DNA bound antitoxin HigA3
Descriptor: DNA (5'-D(P*CP*CP*AP*CP*GP*AP*GP*AP*TP*AP*TP*AP*AP*CP*CP*TP*AP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*TP*AP*GP*GP*TP*TP*AP*TP*AP*TP*CP*TP*CP*GP*TP*GP*G)-3'), Putative antitoxin HigA3
Authors:Park, J.Y, Lee, B.J.
Deposit date:2020-01-23
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
6LTZ
DownloadVisualize
BU of 6ltz by Molmil
Induced DNA bending by unique dimerization of HigA antitoxin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Park, J.Y, Lee, B.J.
Deposit date:2020-01-23
Release date:2020-07-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.973 Å)
Cite:Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
5F8E
DownloadVisualize
BU of 5f8e by Molmil
Rv2258c-SAH
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8C
DownloadVisualize
BU of 5f8c by Molmil
Rv2258c-unbound
Descriptor: GLYCEROL, Methyltransferase
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8F
DownloadVisualize
BU of 5f8f by Molmil
Rv2258c-SFG
Descriptor: GLYCEROL, Methyltransferase, SINEFUNGIN
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
7XDP
DownloadVisualize
BU of 7xdp by Molmil
Tunnel-redesigned O2-tolerant CO dehydrogenase for removal of CO in real flue gas (ChCODH2 A559S mutant in anaerobic condition)
Descriptor: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Heo, Y.Y, Kim, S.M.
Deposit date:2022-03-28
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022
7XDM
DownloadVisualize
BU of 7xdm by Molmil
ChCODH2 A559W mutant in anaerobic condition
Descriptor: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Heo, Y.Y, Kim, S.M.
Deposit date:2022-03-28
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022
7XDN
DownloadVisualize
BU of 7xdn by Molmil
Tunnel-redesigned O2-tolerant CO dehydrogenase for removal of CO in real flue gas (ChCODH2 A559H mutant in anaerobic condition)
Descriptor: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Heo, Y.Y, Kim, S.M.
Deposit date:2022-03-28
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022
7CC7
DownloadVisualize
BU of 7cc7 by Molmil
Tetratricopeptide repeat (TPR) domain of protein tyrosine phosphatase-interacting protein 51 (PTPIP51)
Descriptor: GLYCEROL, PARA-TOLUENE SULFONATE, Regulator of microtubule dynamics protein 3
Authors:Lee, B.I, Park, T.H, Yeo, H.K.
Deposit date:2020-06-16
Release date:2021-01-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Phospholipid transfer function of PTPIP51 at mitochondria-associated ER membranes.
Embo Rep., 22, 2021

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon