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4RCR
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BU of 4rcr by Molmil
STRUCTURE OF THE REACTION CENTER FROM RHODOBACTER SPHAEROIDES R-26 AND 2.4.1: PROTEIN-COFACTOR (BACTERIOCHLOROPHYLL, BACTERIOPHEOPHYTIN, AND CAROTENOID) INTERACTIONS
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Komiya, H, Yeates, T.O, Chirino, A.J, Rees, D.C, Allen, J.P, Feher, G.
登録日1991-09-09
公開日1993-10-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and carotenoid) interactions.
Proc.Natl.Acad.Sci.USA, 85, 1988
2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-09-20
公開日2007-10-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
1C3C
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BU of 1c3c by Molmil
T. MARITIMA ADENYLOSUCCINATE LYASE
分子名称: PROTEIN (ADENYLOSUCCINATE LYASE)
著者Toth, E.A, Yeates, T.O.
登録日1999-07-27
公開日2000-02-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of adenylosuccinate lyase, an enzyme with dual activity in the de novo purine biosynthetic pathway.
Structure Fold.Des., 8, 2000
1C3U
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BU of 1c3u by Molmil
T. MARITIMA ADENYLOSUCCINATE LYASE
分子名称: ADENYLOSUCCINATE LYASE, SULFATE ION
著者Toth, E.A, Yeates, T.O.
登録日1999-07-28
公開日2000-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structure of adenylosuccinate lyase, an enzyme with dual activity in the de novo purine biosynthetic pathway.
Structure Fold.Des., 8, 2000
6NHT
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BU of 6nht by Molmil
Single particle reconstruction of the symmetric core an engineered protein scaffold
分子名称: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
著者Liu, Y, Huynh, D, Yeates, T.O.
登録日2018-12-23
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A 3.8 angstrom resolution cryo-EM structure of a small protein bound to an imaging scaffold.
Nat Commun, 10, 2019
6NHV
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BU of 6nhv by Molmil
Single particle reconstruction of DARPin and its bound GFP on a symmetric scaffold
分子名称: DARP14 - Subunit B, Subunit A-DARPin, superfolder GFP
著者Liu, Y, Huynh, D, Yeates, T.O.
登録日2018-12-24
公開日2019-05-08
最終更新日2019-11-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A 3.8 angstrom resolution cryo-EM structure of a small protein bound to an imaging scaffold.
Nat Commun, 10, 2019
5UI2
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BU of 5ui2 by Molmil
CRYSTAL STRUCTURE OF ORANGE CAROTENOID PROTEIN
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, CHLORIDE ION, Orange carotenoid-binding protein, ...
著者KERFELD, C.A, SAWAYA, M.R, VISHNU, B, KROGMANN, D, YEATES, T.O.
登録日2017-01-12
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of a cyanobacterial water-soluble carotenoid binding protein.
Structure, 11, 2003
6XPH
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BU of 6xph by Molmil
CutR dimer with domain swap
分子名称: Ethanolamine utilization protein EutS, GLYCEROL, POTASSIUM ION, ...
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O, Nie, M.
登録日2020-07-08
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
6XPK
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BU of 6xpk by Molmil
CutR Screw, form 1 with 41.9 angstrom pitch
分子名称: Ethanolamine utilization protein EutS
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
登録日2020-07-08
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
6XPL
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BU of 6xpl by Molmil
CutR Screw, form 2 with 33.8 angstrom pitch
分子名称: Ethanolamine utilization protein EutS
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
登録日2020-07-08
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
6XPI
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BU of 6xpi by Molmil
CutR flat hexamer, form 1
分子名称: Ethanolamine utilization protein EutS
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
登録日2020-07-08
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
6XPJ
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BU of 6xpj by Molmil
CutR flat hexamer, form 2
分子名称: Ethanolamine utilization protein EutS, SULFATE ION
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
登録日2020-07-08
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
1KIB
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BU of 1kib by Molmil
cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in the form of an oblate shell
分子名称: HEME C, cytochrome c6
著者Kerfeld, C.A, Sawaya, M.R, Krogmann, D, Yeates, T.O.
登録日2001-12-03
公開日2002-07-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in a nearly symmetric shell.
Acta Crystallogr.,Sect.D, 58, 2002
1SVD
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BU of 1svd by Molmil
The structure of Halothiobacillus neapolitanus RuBisCo
分子名称: GLYCEROL, Ribulose bisphosphate carboxylase small chain, SULFATE ION, ...
著者Kerfeld, C.A, Sawaya, M.R, Pashkov, I, Cannon, G, Williams, E, Tran, K, Yeates, T.O.
登録日2004-03-29
公開日2005-04-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of Halothiobacillus neapolitanus RuBisCo
To be Published
8G47
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BU of 8g47 by Molmil
KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
分子名称: AMG 510 (bound form), GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G42
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BU of 8g42 by Molmil
KRAS G12C complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4H
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BU of 8g4h by Molmil
KRAS G13C complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4F
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BU of 8g4f by Molmil
KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G3K
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BU of 8g3k by Molmil
Cryo-EM imaging scaffold subunits A and B used to display KRAS G12C complex with GDP
分子名称: Cob_adeno_trans domain-containing protein, Cryo-EM imaging scaffold subunit B with DARPin - RCG-33
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4E
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BU of 8g4e by Molmil
Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
分子名称: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
1YAC
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BU of 1yac by Molmil
THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE YCAC GENE PRODUCT FROM ESCHERICHIA COLI REVEALS AN OCTAMERIC HYDROLASE OF UNKNOWN SPECIFICITY
分子名称: YCAC GENE PRODUCT
著者Colovos, C, Cascio, D, Yeates, T.O.
登録日1998-07-29
公開日1999-02-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8 A crystal structure of the ycaC gene product from Escherichia coli reveals an octameric hydrolase of unknown specificity.
Structure, 6, 1998
8UJA
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BU of 8uja by Molmil
T33-fn10 - Designed Tetrahedral Protein Cage Using Fragment-based Hydrogen Bond Networks
分子名称: T33-fn10: engineered DrsE like sulfur reductase, T33-fn10: engineered enoyl-CoA hydratase/isomerase
著者Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-11
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
2A1B
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BU of 2a1b by Molmil
Carboxysome shell protein ccmK2
分子名称: Carbon dioxide concentrating mechanism protein ccmK homolog 2
著者Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
登録日2005-06-20
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A10
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BU of 2a10 by Molmil
carboxysome shell protein ccmK4
分子名称: Carbon dioxide concentrating mechanism protein ccmK homolog 4
著者Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
登録日2005-06-17
公開日2005-08-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A5X
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BU of 2a5x by Molmil
Crystal Structure of a Cross-linked Actin Dimer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Actin, alpha skeletal muscle, ...
著者Kudryashov, D.S, Sawaya, M.R, Adisetiyo, H, Norcross, T, Hegyi, G, Reisler, E, Yeates, T.O.
登録日2005-07-01
公開日2005-08-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The crystal structure of a cross-linked actin dimer suggests a detailed molecular interface in F-actin
Proc.Natl.Acad.Sci.Usa, 102, 2005

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