Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1SE0
DownloadVisualize
BU of 1se0 by Molmil
Crystal structure of DIAP1 BIR1 bound to a Grim peptide
分子名称: Apoptosis 1 inhibitor, Cell death protein Grim, ZINC ION
著者Yan, N, Wu, J.W, Shi, Y.
登録日2004-02-15
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular mechanisms of DrICE inhibition by DIAP1 and removal of inhibition by Reaper, Hid and Grim.
Nat.Struct.Mol.Biol., 11, 2004
1SDZ
DownloadVisualize
BU of 1sdz by Molmil
Crystal structure of DIAP1 BIR1 bound to a Reaper peptide
分子名称: Apoptosis 1 inhibitor, Reaper, ZINC ION
著者Yan, N, Wu, J.W, Shi, Y.
登録日2004-02-15
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Molecular mechanisms of DrICE inhibition by DIAP1 and removal of inhibition by Reaper, Hid and Grim.
Nat.Struct.Mol.Biol., 11, 2004
1TY4
DownloadVisualize
BU of 1ty4 by Molmil
Crystal structure of a CED-9/EGL-1 complex
分子名称: Apoptosis regulator ced-9, EGg Laying defective EGL-1, programmed cell death activator
著者Yan, N, Gu, L, Kokel, D, Xue, D, Shi, Y.
登録日2004-07-07
公開日2004-09-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural, Biochemical, and Functional Analyses of CED-9 Recognition by the Proapoptotic Proteins EGL-1 and CED-4
Mol.Cell, 15, 2004
2FP3
DownloadVisualize
BU of 2fp3 by Molmil
Crystal structure of the Drosophila initiator caspase Dronc
分子名称: Caspase Nc
著者Yan, N, Gu, L, Shi, Y.
登録日2006-01-15
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and activation mechanism of the Drosophila initiator caspase dronc
J.Biol.Chem., 281, 2006
2A5Y
DownloadVisualize
BU of 2a5y by Molmil
Structure of a CED-4/CED-9 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Apoptosis regulator ced-9, MAGNESIUM ION, ...
著者Yan, N, Liu, Q, Hao, Q, Gu, L, Shi, Y.
登録日2005-07-01
公開日2005-10-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans.
Nature, 437, 2005
4GJP
DownloadVisualize
BU of 4gjp by Molmil
Crystal structure of the TAL effector dHax3 bound to dsDNA containing repetitive methyl-CpG
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*CP*T)-3'), Hax3, ...
著者Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
登録日2012-08-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a protein complex
To be Published
4GJR
DownloadVisualize
BU of 4gjr by Molmil
Crystal structure of the TAL effector dHax3 bound to methylated dsDNA
分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*AP*GP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*(5CM)P*TP*AP*(5CM)P*CP*TP*CP*(5CM)P*CP*T)-3'), Hax3
著者Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
登録日2012-08-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of a protein complex
To be Published
6P2J
DownloadVisualize
BU of 6p2j by Molmil
Dimeric structure of ACAT1
分子名称: S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name), Sterol O-acyltransferase 1
著者Yan, N, Qian, H.W.
登録日2019-05-21
公開日2020-05-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for catalysis and substrate specificity of human ACAT1.
Nature, 581, 2020
6P2P
DownloadVisualize
BU of 6p2p by Molmil
Tetrameric structure of ACAT1
分子名称: S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name), Sterol O-acyltransferase 1
著者Yan, N, Qian, H.W.
登録日2019-05-21
公開日2020-05-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for catalysis and substrate specificity of human ACAT1.
Nature, 581, 2020
7MIY
DownloadVisualize
BU of 7miy by Molmil
Human N-type voltage-gated calcium channel Cav2.2 at 3.1 Angstrom resolution
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Gao, S, Yao, X.
登録日2021-04-18
公開日2021-07-07
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of human Ca v 2.2 channel blocked by the painkiller ziconotide.
Nature, 596, 2021
7MIX
DownloadVisualize
BU of 7mix by Molmil
Human N-type voltage-gated calcium channel Cav2.2 in the presence of ziconotide at 3.0 Angstrom resolution
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Gao, S, Yao, X.
登録日2021-04-18
公開日2021-07-07
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of human Ca v 2.2 channel blocked by the painkiller ziconotide.
Nature, 596, 2021
8X93
DownloadVisualize
BU of 8x93 by Molmil
P/Q type calcium channel in complex with omega-Agatoxin IVA
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 2024
8XMO
DownloadVisualize
BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X90
DownloadVisualize
BU of 8x90 by Molmil
P/Q type calcium channel
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE], 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 2024
8XMM
DownloadVisualize
BU of 8xmm by Molmil
Voltage-gated sodium channel Nav1.7 variant M9
分子名称: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMN
DownloadVisualize
BU of 8xmn by Molmil
Voltage-gated sodium channel Nav1.7 variant M2
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X91
DownloadVisualize
BU of 8x91 by Molmil
P/Q type calcium channel in complex with omega-conotoxin MVIIC
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 2024
6DMB
DownloadVisualize
BU of 6dmb by Molmil
Cryo-EM structure of human Ptch1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Yan, N, Gong, X, Qian, H.W.
登録日2018-06-04
公開日2018-07-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for the recognition of Sonic Hedgehog by human Patched1.
Science, 361, 2018
6DMY
DownloadVisualize
BU of 6dmy by Molmil
Cryo-EM structure of human Ptch1 and ShhN complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yan, N, Gong, X, Qian, H.W.
登録日2018-06-05
公開日2018-07-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for the recognition of Sonic Hedgehog by human Patched1.
Science, 361, 2018
6DMO
DownloadVisualize
BU of 6dmo by Molmil
Cryo-EM structure of human Ptch1 with three mutations L282Q/T500F/P504L
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein patched homolog 1
著者Yan, N, Gong, X, Qian, H.W.
登録日2018-06-05
公開日2018-07-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for the recognition of Sonic Hedgehog by human Patched1.
Science, 361, 2018
7W9K
DownloadVisualize
BU of 7w9k by Molmil
Cryo-EM structure of human Nav1.7-beta1-beta2 complex at 2.2 angstrom resolution
分子名称: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
登録日2021-12-09
公開日2022-06-01
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7W9L
DownloadVisualize
BU of 7w9l by Molmil
Cryo-EM structure of human Nav1.7(E406K)-beta1-beta2 complex
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
登録日2021-12-10
公開日2022-06-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
3NEG
DownloadVisualize
BU of 3neg by Molmil
Pyrabactin-bound PYL1 structure in the open and close forms
分子名称: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL1, BROMIDE ION
著者Yan, N.
登録日2010-06-08
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Functional mechanism of the ABA agonist pyrabactin
J.Biol.Chem., 285, 2010
3NEF
DownloadVisualize
BU of 3nef by Molmil
High-resolution pyrabactin-bound PYL1 structure
分子名称: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL1
著者Yan, N.
登録日2010-06-08
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional mechanism of the ABA agonist pyrabactin
J.Biol.Chem., 285, 2010
3NR4
DownloadVisualize
BU of 3nr4 by Molmil
Pyrabactin-bound PYL2
分子名称: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL2
著者Yan, N.
登録日2010-06-30
公開日2010-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Single amino acid alteration between Valine and Isoleucine determines the distinct pyrabactin selectivity by PYL1 and PYL2
J.Biol.Chem., 285, 2010

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon