Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4XQ8
DownloadVisualize
BU of 4xq8 by Molmil
Human DNA polymerase lambda- MgdATP binary complex and complex with 6 paired DNA
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ...
著者Tsai, M.D, Liu, M.S.
登録日2015-01-19
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.798 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CR0
DownloadVisualize
BU of 5cr0 by Molmil
Human DNA polymerase lambda L431A mutant- MgdCTP binary and complex with 6 paired DNA
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ...
著者Liu, M.S, Tsai, M.D.
登録日2015-07-22
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5DDM
DownloadVisualize
BU of 5ddm by Molmil
Human DNA polymerase lambda- Apoenzyme and complex with 6 paired DNA
分子名称: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), DNA polymerase lambda, ...
著者Liu, M.S, Tsai, M.D.
登録日2015-08-25
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5DDY
DownloadVisualize
BU of 5ddy by Molmil
Binary complex of human Polymerase lambda with dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, MAGNESIUM ION, ...
著者Liu, M.S, Tsai, M.D.
登録日2015-08-25
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CWR
DownloadVisualize
BU of 5cwr by Molmil
Crystal Structure of human DNA polymerase lambda L431A mutant in complex with a one nucleotide DNA gap and dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
著者Liu, M.S, Tsai, M.D.
登録日2015-07-28
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
8KE2
DownloadVisualize
BU of 8ke2 by Molmil
PylRS C-terminus domain mutant bound with L-3-trifluoromethylphenylalanine and AMPNP
分子名称: (2S)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.19639969 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE3
DownloadVisualize
BU of 8ke3 by Molmil
PylRS C-terminus domain mutant bound with D-3-trifluoromethylphenylalanine and AMPNP
分子名称: (2R)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89980984 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE5
DownloadVisualize
BU of 8ke5 by Molmil
PylRS C-terminus domain mutant bound with D-3-chlorophenylalanine and AMPNP
分子名称: (2R)-2-azanyl-3-(3-chlorophenyl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.900073 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE6
DownloadVisualize
BU of 8ke6 by Molmil
PylRS C-terminus domain mutant bound with L-3-chlorophenylalanine and AMPNP
分子名称: 3-CHLORO-L-PHENYLALANINE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89570856 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE1
DownloadVisualize
BU of 8ke1 by Molmil
PylRS C-terminus domain mutant bound with L-3-bromophenylalanine and AMPNP
分子名称: 3-bromo-L-phenylalanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.50081539 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE4
DownloadVisualize
BU of 8ke4 by Molmil
PylRS C-terminus domain mutant bound with D-3-bromophenylalanine and AMPNP
分子名称: (2R)-2-azanyl-3-(3-bromophenyl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75050962 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8K1K
DownloadVisualize
BU of 8k1k by Molmil
KtrA bound with ATP and sodium
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, SODIUM ION
著者Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
登録日2023-07-11
公開日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献KtrA bound with ATP and sodium
To Be Published
8K16
DownloadVisualize
BU of 8k16 by Molmil
KtrA bound with ATP and thallium
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, THALLIUM (I) ION
著者Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
登録日2023-07-10
公開日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献KtrA bound with ATP and thallium
To Be Published
8K1T
DownloadVisualize
BU of 8k1t by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
著者Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
登録日2023-07-11
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
To Be Published
8K1S
DownloadVisualize
BU of 8k1s by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
著者Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
登録日2023-07-11
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
To Be Published
8K1U
DownloadVisualize
BU of 8k1u by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
著者Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
登録日2023-07-11
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
To Be Published
5XZW
DownloadVisualize
BU of 5xzw by Molmil
Crystal structure of Rad53 1-466
分子名称: Serine/threonine-protein kinase RAD53
著者Weng, J.H, Tsai, M.D.
登録日2017-07-14
公開日2017-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phospho-Priming Confers Functionally Relevant Specificities for Rad53 Kinase Autophosphorylation
Biochemistry, 56, 2017
8XMH
DownloadVisualize
BU of 8xmh by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, vertical C2 symmetry axis
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
著者Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
登録日2023-12-27
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, vertical C2 symmetry axis
To Be Published
8XMI
DownloadVisualize
BU of 8xmi by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, C1 symmetry
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
著者Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
登録日2023-12-27
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, C1 symmetry
To Be Published
5DKW
DownloadVisualize
BU of 5dkw by Molmil
Ternary crystal structure of polymerase lambda with a GA mispair at the primer terminus with Ca2+ in the active
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
著者Liu, M.S, Tsai, M.D.
登録日2015-09-04
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.689 Å)
主引用文献Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
7CGY
DownloadVisualize
BU of 7cgy by Molmil
Human DMC1 Q244M mutant of the post-synaptic complexes
分子名称: CALCIUM ION, Meiotic recombination protein DMC1/LIM15 homolog, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Chi, H.Y, Ho, M.C, Tsai, M.D, Luo, S.C, Yeh, H.Y.
登録日2020-07-03
公開日2020-11-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.
Nat Commun, 12, 2021
7C9C
DownloadVisualize
BU of 7c9c by Molmil
Human DMC1 pre-synaptic complexes
分子名称: CALCIUM ION, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Meiotic recombination protein DMC1/LIM15 homolog, ...
著者Luo, S.C, Yeh, H.Y, Chi, P, Ho, M.C, Tsai, M.D.
登録日2020-06-05
公開日2020-11-25
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.
Nat Commun, 12, 2021
7C99
DownloadVisualize
BU of 7c99 by Molmil
Human DMC1 post-synaptic complexes with mismatched dsDNA
分子名称: CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
著者Luo, S.C, Yeh, H.Y, Chi, P, Ho, M.C, Tsai, M.D.
登録日2020-06-05
公開日2020-11-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.
Nat Commun, 12, 2021
7C9A
DownloadVisualize
BU of 7c9a by Molmil
Human RAD51 post-synaptic complexes mutant (V273P, D274G)
分子名称: CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
著者Chi, H.Y, Ho, M.C, Tsai, M.D, Luo, S.C, Yeh, H.Y.
登録日2020-06-05
公開日2020-11-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.
Nat Commun, 12, 2021
7C98
DownloadVisualize
BU of 7c98 by Molmil
Human DMC1 post-synaptic complexes
分子名称: CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
著者Luo, S.C, Yeh, H.Y, Chi, P, Ho, M.C, Tsai, M.D.
登録日2020-06-05
公開日2020-11-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.
Nat Commun, 12, 2021

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon