Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6KPH
DownloadVisualize
BU of 6kph by Molmil
343 K cryoEM structure of Sso-KARI in complex with Mg2+, NADH and CPD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, B.L, Huang, C.H, Tsai, M.D.
Deposit date:2019-08-15
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions.
J.Am.Chem.Soc., 141, 2019
6KQO
DownloadVisualize
BU of 6kqo by Molmil
328 K cryoEM structure of Sso-KARI in complex with Mg2+, NADH and CPD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, B.L, Huang, C.H, Tsai, M.D.
Deposit date:2019-08-18
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions.
J.Am.Chem.Soc., 141, 2019
6KPK
DownloadVisualize
BU of 6kpk by Molmil
309 K cryoEM structure of Sso-KARI in complex with Mg2+
Descriptor: Ketol-acid reductoisomerase, MAGNESIUM ION
Authors:Chen, C.Y, Chang, Y.C, Lin, B.L, Huang, C.H, Tsai, M.D.
Deposit date:2019-08-15
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions.
J.Am.Chem.Soc., 141, 2019
6IPM
DownloadVisualize
BU of 6ipm by Molmil
Binary Complex of Human DNA Polymerase Mu with MgdCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MAGNESIUM ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6IPF
DownloadVisualize
BU of 6ipf by Molmil
Post-catalytic Complex of Human DNA Polymerase Mu with Templating Cytosine and Mn-8oxodGMP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6IPL
DownloadVisualize
BU of 6ipl by Molmil
Binary Complex of Human DNA Polymerase Mu with MgdATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MAGNESIUM ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6KQK
DownloadVisualize
BU of 6kqk by Molmil
323 K cryoEM structure of Sso-KARI in complex with Mg2+, NADH and CPD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, B.L, Huang, C.H, Tsai, M.D.
Deposit date:2019-08-18
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions.
J.Am.Chem.Soc., 141, 2019
6IPD
DownloadVisualize
BU of 6ipd by Molmil
Post-catalytic Complex of Human DNA Polymerase Mu with Templating Adenine and Mn-8oxodGMP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6IPI
DownloadVisualize
BU of 6ipi by Molmil
Binary Complex of Human DNA Polymerase Mu with MndCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6LY7
DownloadVisualize
BU of 6ly7 by Molmil
PylRS C-terminus domain mutant bound with 1-Formyl-L-tryptophan and AMPNP
Descriptor: MAGNESIUM ION, N1-FORMYL-TRYPTOPHAN, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09447265 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
6JD1
DownloadVisualize
BU of 6jd1 by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+, NADH, and CPD at pH7.5
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, Putative ketol-acid reductoisomerase 2, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6JD2
DownloadVisualize
BU of 6jd2 by Molmil
Crystal structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+ at pH8.5
Descriptor: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Putative ketol-acid reductoisomerase 2
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J.Am.Chem.Soc., 141, 2019
6JCW
DownloadVisualize
BU of 6jcw by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) with Mg2+ at pH8.5
Descriptor: MAGNESIUM ION, ketol-acid reductoisomerase
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6LYB
DownloadVisualize
BU of 6lyb by Molmil
PylRS C-terminus domain mutant in complex with 3-Benzothienyl-D-alanine and AMPNP
Descriptor: (2R)-2-azanyl-3-(1-benzothiophen-3-yl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.90366471 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
6JCV
DownloadVisualize
BU of 6jcv by Molmil
Cryo-EM structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) with Mg2+ at pH7.5
Descriptor: MAGNESIUM ION, Putative ketol-acid reductoisomerase 2
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6LY6
DownloadVisualize
BU of 6ly6 by Molmil
PylRS C-terminus domain mutant bound with 3-(1-Naphthyl)-L-alanine and AMPNP
Descriptor: MAGNESIUM ION, NAPHTHALEN-2-YL-3-ALANINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5001328 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
6IPJ
DownloadVisualize
BU of 6ipj by Molmil
Binary Complex of Human DNA Polymerase Mu with MndTTP
Descriptor: DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, SULFATE ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
6LYA
DownloadVisualize
BU of 6lya by Molmil
PylRS C-terminus domain mutant bound with 1-Methyl-L-tryptophan and AMPNP
Descriptor: 1,2-ETHANEDIOL, 1-Methyl-L-tryptophan, MAGNESIUM ION, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.590702 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
6JCZ
DownloadVisualize
BU of 6jcz by Molmil
Cryo-EM Structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+, NADPH, and CPD at pH7.5
Descriptor: MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative ketol-acid reductoisomerase 2, ...
Authors:Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
Deposit date:2019-01-30
Release date:2019-04-17
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J. Am. Chem. Soc., 141, 2019
6LY3
DownloadVisualize
BU of 6ly3 by Molmil
PylRS C-terminus domain mutant bound with 3-Benzothienyl-L-alanine and AMPNP
Descriptor: 3-(1-benzothiophen-3-yl)-L-alanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89590144 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
5CB1
DownloadVisualize
BU of 5cb1 by Molmil
Apo enzyme of human Polymerase lambda
Descriptor: DNA polymerase lambda
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-06-30
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CP2
DownloadVisualize
BU of 5cp2 by Molmil
Human DNA polymerase lambda L431A mutant- Apoenzyme and complex with 6 paired DNA
Descriptor: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), DNA polymerase lambda, ...
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-07-21
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CJ7
DownloadVisualize
BU of 5cj7 by Molmil
Human DNA polymerase lambda L431A mutant- MgdTTP binary and complex with 6 paired DNA
Descriptor: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), DNA polymerase lambda, ...
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-07-14
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CA7
DownloadVisualize
BU of 5ca7 by Molmil
Human DNA polymerase lambda- MgdGTP binary and complex with 6 paired DNA
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-06-29
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5CHG
DownloadVisualize
BU of 5chg by Molmil
Human DNA polymerase lambda L431A mutant- MgdGTP binary and complex with 6 paired DNA
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-07-10
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon