1V9P
| Crystal Structure Of Nad+-Dependent DNA Ligase | Descriptor: | ADENOSINE MONOPHOSPHATE, DNA ligase, ZINC ION | Authors: | Lee, J.Y, Chang, C, Song, H.K, Moon, J, Yang, J.K, Kim, H.K, Kwon, S.K, Suh, S.W. | Deposit date: | 2004-01-27 | Release date: | 2004-03-30 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications. Embo J., 19, 2000
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7YRB
| UBR box of human UBR6 | Descriptor: | F-box protein 11, isoform CRA_f, SULFATE ION, ... | Authors: | Kim, B, Song, H.K. | Deposit date: | 2022-08-09 | Release date: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Crystal structure of UBR box from human UBR6 To Be Published
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1DGS
| CRYSTAL STRUCTURE OF NAD+-DEPENDENT DNA LIGASE FROM T. FILIFORMIS | Descriptor: | ADENOSINE MONOPHOSPHATE, DNA LIGASE, ZINC ION | Authors: | Lee, J.Y, Chang, C, Song, H.K, Kwon, S.T, Suh, S.W. | Deposit date: | 1999-11-25 | Release date: | 2000-11-27 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications. EMBO J., 19, 2000
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4XSJ
| Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter fused with T4 lysozyme | Descriptor: | Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION | Authors: | Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H. | Deposit date: | 2015-01-22 | Release date: | 2015-09-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter. Embo Rep., 16, 2015
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4XTB
| Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter | Descriptor: | Calcium uniporter protein, mitochondrial, TETRAETHYLENE GLYCOL | Authors: | Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H. | Deposit date: | 2015-01-23 | Release date: | 2015-09-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter. Embo Rep., 16, 2015
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1JXV
| Crystal Structure of Human Nucleoside Diphosphate Kinase A | Descriptor: | Nucleoside Diphosphate Kinase A | Authors: | Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W. | Deposit date: | 2001-09-10 | Release date: | 2002-04-10 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor. Proteins, 46, 2002
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5K5U
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5K63
| Crystal structure of N-terminal amidase C187S | Descriptor: | ASPARAGINE, GLYCINE, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5JST
| MBP fused MDV1 coiled coil | Descriptor: | ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein,Mitochondrial division protein 1, ... | Authors: | Kim, B.-W, Song, H.K. | Deposit date: | 2016-05-09 | Release date: | 2017-03-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.199 Å) | Cite: | ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coils. Sci Rep, 7, 2017
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5K60
| Crystal structure of N-terminal amidase with Gln-Val peptide | Descriptor: | GLUTAMINE, Nta1p, VALINE | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K62
| Crystal structure of N-terminal amidase C187S | Descriptor: | ASPARAGINE, Nta1p, VALINE | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.899 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K66
| Crystal structure of N-terminal amidase with Asn-Glu peptide | Descriptor: | ASPARAGINE, GLUTAMIC ACID, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.002 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K61
| Crystal structure of N-terminal amidase with Gln-Gly peptide | Descriptor: | GLUTAMINE, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-04-19 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K5V
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1QZY
| Human Methionine Aminopeptidase in complex with bengamide inhibitor LAF153 and cobalt | Descriptor: | (E)-(2R,3R,4S,5R)-3,4,5-TRIHYDROXY-2-METHOXY-8,8-DIMETHYL-NON-6-ENOIC ACID ((3S,6R)-6-HYDROXY-2-OXO-AZEPAN-3-YL)-AMIDE, COBALT (II) ION, Methionine aminopeptidase 2, ... | Authors: | Eck, M.J, Song, H.K, Morollo, A. | Deposit date: | 2003-09-18 | Release date: | 2003-11-25 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Proteomics-based target identification: bengamides as a new class of methionine aminopeptidase inhibitors. J.Biol.Chem., 278, 2003
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6ICO
| Pseudomonas putida CBB5 NdmA with theophylline | Descriptor: | COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICK
| Pseudomonas putida CBB5 NdmA | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICM
| Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.961 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICP
| Pseudomonas putida CBB5 NdmA QL mutant with caffeine | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICN
| Pseudomonas putida CBB5 NdmA with caffeine | Descriptor: | CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICQ
| Pseudomonas putida CBB5 NdmA QL mutant with theobromine | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICL
| Pseudomonas putida CBB5 NdmB | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6KHZ
| p62/SQSTM1 ZZ domain with Gly-peptide | Descriptor: | Sequestosome-1, ZINC ION | Authors: | Kwon, D.H, Kim, L, Song, H.K. | Deposit date: | 2019-07-16 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
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6KGI
| RLGS-yUbr1 Ubr box | Descriptor: | E3 ubiquitin-protein ligase UBR1, ZINC ION | Authors: | Heo, J, Kwon, D.H, Kim, L, Song, H.K. | Deposit date: | 2019-07-11 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.04 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
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2AEH
| Focal adhesion kinase 1 | Descriptor: | Focal adhesion kinase 1 | Authors: | Ceccarelli, D.F, Song, H.K, Poy, F, Schaller, M.D, Eck, M.J. | Deposit date: | 2005-07-22 | Release date: | 2005-10-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.53 Å) | Cite: | Crystal Structure of the FERM Domain of Focal Adhesion Kinase J.Biol.Chem., 281, 2006
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