Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1V9P
DownloadVisualize
BU of 1v9p by Molmil
Crystal Structure Of Nad+-Dependent DNA Ligase
分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase, ZINC ION
著者Lee, J.Y, Chang, C, Song, H.K, Moon, J, Yang, J.K, Kim, H.K, Kwon, S.K, Suh, S.W.
登録日2004-01-27
公開日2004-03-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications.
Embo J., 19, 2000
7YRB
DownloadVisualize
BU of 7yrb by Molmil
UBR box of human UBR6
分子名称: F-box protein 11, isoform CRA_f, SULFATE ION, ...
著者Kim, B, Song, H.K.
登録日2022-08-09
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Crystal structure of UBR box from human UBR6
To Be Published
1DGS
DownloadVisualize
BU of 1dgs by Molmil
CRYSTAL STRUCTURE OF NAD+-DEPENDENT DNA LIGASE FROM T. FILIFORMIS
分子名称: ADENOSINE MONOPHOSPHATE, DNA LIGASE, ZINC ION
著者Lee, J.Y, Chang, C, Song, H.K, Kwon, S.T, Suh, S.W.
登録日1999-11-25
公開日2000-11-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications.
EMBO J., 19, 2000
4XSJ
DownloadVisualize
BU of 4xsj by Molmil
Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter fused with T4 lysozyme
分子名称: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
著者Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
登録日2015-01-22
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
4XTB
DownloadVisualize
BU of 4xtb by Molmil
Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter
分子名称: Calcium uniporter protein, mitochondrial, TETRAETHYLENE GLYCOL
著者Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
登録日2015-01-23
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
1JXV
DownloadVisualize
BU of 1jxv by Molmil
Crystal Structure of Human Nucleoside Diphosphate Kinase A
分子名称: Nucleoside Diphosphate Kinase A
著者Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W.
登録日2001-09-10
公開日2002-04-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor.
Proteins, 46, 2002
5K5U
DownloadVisualize
BU of 5k5u by Molmil
Crystal structure of N-terminal amidase
分子名称: Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K63
DownloadVisualize
BU of 5k63 by Molmil
Crystal structure of N-terminal amidase C187S
分子名称: ASPARAGINE, GLYCINE, Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5JST
DownloadVisualize
BU of 5jst by Molmil
MBP fused MDV1 coiled coil
分子名称: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein,Mitochondrial division protein 1, ...
著者Kim, B.-W, Song, H.K.
登録日2016-05-09
公開日2017-03-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coils.
Sci Rep, 7, 2017
5K60
DownloadVisualize
BU of 5k60 by Molmil
Crystal structure of N-terminal amidase with Gln-Val peptide
分子名称: GLUTAMINE, Nta1p, VALINE
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K62
DownloadVisualize
BU of 5k62 by Molmil
Crystal structure of N-terminal amidase C187S
分子名称: ASPARAGINE, Nta1p, VALINE
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K66
DownloadVisualize
BU of 5k66 by Molmil
Crystal structure of N-terminal amidase with Asn-Glu peptide
分子名称: ASPARAGINE, GLUTAMIC ACID, Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K61
DownloadVisualize
BU of 5k61 by Molmil
Crystal structure of N-terminal amidase with Gln-Gly peptide
分子名称: GLUTAMINE, Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-04-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K5V
DownloadVisualize
BU of 5k5v by Molmil
Crystal structure of N-terminal amidase C187S
分子名称: Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-04-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
1QZY
DownloadVisualize
BU of 1qzy by Molmil
Human Methionine Aminopeptidase in complex with bengamide inhibitor LAF153 and cobalt
分子名称: (E)-(2R,3R,4S,5R)-3,4,5-TRIHYDROXY-2-METHOXY-8,8-DIMETHYL-NON-6-ENOIC ACID ((3S,6R)-6-HYDROXY-2-OXO-AZEPAN-3-YL)-AMIDE, COBALT (II) ION, Methionine aminopeptidase 2, ...
著者Eck, M.J, Song, H.K, Morollo, A.
登録日2003-09-18
公開日2003-11-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Proteomics-based target identification: bengamides as a new class of methionine aminopeptidase inhibitors.
J.Biol.Chem., 278, 2003
6ICO
DownloadVisualize
BU of 6ico by Molmil
Pseudomonas putida CBB5 NdmA with theophylline
分子名称: COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ...
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICK
DownloadVisualize
BU of 6ick by Molmil
Pseudomonas putida CBB5 NdmA
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICM
DownloadVisualize
BU of 6icm by Molmil
Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ...
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.961 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICP
DownloadVisualize
BU of 6icp by Molmil
Pseudomonas putida CBB5 NdmA QL mutant with caffeine
分子名称: CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICN
DownloadVisualize
BU of 6icn by Molmil
Pseudomonas putida CBB5 NdmA with caffeine
分子名称: CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICQ
DownloadVisualize
BU of 6icq by Molmil
Pseudomonas putida CBB5 NdmA QL mutant with theobromine
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ...
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6ICL
DownloadVisualize
BU of 6icl by Molmil
Pseudomonas putida CBB5 NdmB
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB
著者Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
登録日2018-09-06
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
6KHZ
DownloadVisualize
BU of 6khz by Molmil
p62/SQSTM1 ZZ domain with Gly-peptide
分子名称: Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2019-07-16
公開日2020-01-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway.
J.Biol.Chem., 295, 2020
6KGI
DownloadVisualize
BU of 6kgi by Molmil
RLGS-yUbr1 Ubr box
分子名称: E3 ubiquitin-protein ligase UBR1, ZINC ION
著者Heo, J, Kwon, D.H, Kim, L, Song, H.K.
登録日2019-07-11
公開日2020-01-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway.
J.Biol.Chem., 295, 2020
2AEH
DownloadVisualize
BU of 2aeh by Molmil
Focal adhesion kinase 1
分子名称: Focal adhesion kinase 1
著者Ceccarelli, D.F, Song, H.K, Poy, F, Schaller, M.D, Eck, M.J.
登録日2005-07-22
公開日2005-10-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal Structure of the FERM Domain of Focal Adhesion Kinase
J.Biol.Chem., 281, 2006

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon