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1PER
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BU of 1per by Molmil
THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR)
著者Rodgers, D.W, Harrison, S.C.
登録日1993-11-09
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites.
Structure, 1, 1993
1HMV
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BU of 1hmv by Molmil
THE STRUCTURE OF UNLIGANDED REVERSE TRANSCRIPTASE FROM THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
分子名称: HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66), MAGNESIUM ION
著者Rodgers, D.W, Gamblin, S.J, Harris, B.A, Ray, S, Culp, J.S, Hellmig, B, Woolf, D.J, Debouck, C, Harrison, S.C.
登録日1994-12-15
公開日1995-03-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of unliganded reverse transcriptase from the human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.USA, 92, 1995
8SW1
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BU of 8sw1 by Molmil
Puromycin-sensitive aminopeptidase with bound peptide
分子名称: Polyglutamine peptide, Puromycin-sensitive aminopeptidase, ZINC ION
著者Rodgers, D.W, Madabushi, S.
登録日2023-05-17
公開日2023-07-26
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Structure of puromycin-sensitive aminopeptidase and polyglutamine binding.
Plos One, 18, 2023
8SW0
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BU of 8sw0 by Molmil
Puromycin sensitive aminopeptidase
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Puromycin-sensitive aminopeptidase, ...
著者Rodgers, D.W, Sampath, S.
登録日2023-05-17
公開日2023-07-26
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structure of puromycin-sensitive aminopeptidase and polyglutamine binding.
Plos One, 18, 2023
3TUV
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BU of 3tuv by Molmil
Crystal structure of insulysin with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Insulin-degrading enzyme, Peptide
著者Rodgers, D.W, Noinaj, N.
登録日2011-09-19
公開日2011-10-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Anion Activation Site of Insulin-degrading Enzyme.
J.Biol.Chem., 287, 2012
4P08
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BU of 4p08 by Molmil
Engineered thermostable dimeric cocaine esterase
分子名称: Cocaine esterase
著者Rodgers, D.W, Chow, K.-M, Fang, L, Zhan, C.-G.
登録日2014-02-20
公開日2014-07-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.341 Å)
主引用文献Rational design, preparation, and characterization of a therapeutic enzyme mutant with improved stability and function for cocaine detoxification.
Acs Chem.Biol., 9, 2014
2O36
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BU of 2o36 by Molmil
Crystal structure of engineered thimet oligopeptidase with neurolysin specificity in neurotensin cleavage site
分子名称: Thimet oligopeptidase, ZINC ION
著者Rodgers, D.W, Lim, E.J.
登録日2006-11-30
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Swapping the substrate specificities of the neuropeptidases neurolysin and thimet oligopeptidase.
J.Biol.Chem., 282, 2007
2O3E
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BU of 2o3e by Molmil
Crystal structure of engineered neurolysin with thimet oligopeptidase specificity for neurotensin cleavage site.
分子名称: Neurolysin, ZINC ION
著者Rodgers, D.W, Lim, E.J.
登録日2006-12-01
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Swapping the substrate specificities of the neuropeptidases neurolysin and thimet oligopeptidase.
J.Biol.Chem., 282, 2007
4FXY
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BU of 4fxy by Molmil
Crystal structure of rat neurolysin with bound pyrazolidin inhibitor
分子名称: 1-{(2S)-1-[(3R)-3-(2-chlorophenyl)-2-(2-fluorophenyl)pyrazolidin-1-yl]-1-oxopropan-2-yl}-3-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]urea, Neurolysin, mitochondrial, ...
著者Rodgers, D.W, Hines, C.S.
登録日2012-07-03
公開日2013-11-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Allosteric inhibition of the neuropeptidase neurolysin.
J.Biol.Chem., 289, 2014
3CPM
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BU of 3cpm by Molmil
plant peptide deformylase PDF1B crystal structure
分子名称: Peptide deformylase, chloroplast, SULFATE ION, ...
著者Rodgers, D.W, Houtz, R.L, Dirk, L.M.A, Schmidt, J.J, Cai, Y.
登録日2008-03-31
公開日2008-07-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture
Biochem.J., 413, 2008
3P7L
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BU of 3p7l by Molmil
Rat Insulin Degrading Enzyme (Insulysin)
分子名称: Insulin-degrading enzyme, ZINC ION
著者Rodgers, D.W, Noinaj, N.
登録日2010-10-12
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.0776 Å)
主引用文献Identification of the allosteric regulatory site of insulysin.
Plos One, 6, 2011
3P7O
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BU of 3p7o by Molmil
Rat Insulin Degrading Enzyme (Insulysin) E111F mutant with two bound peptides
分子名称: Insulin-degrading enzyme, active site bound peptide, distal site bound peptide
著者Rodgers, D.W, Noinaj, N.
登録日2010-10-12
公開日2011-07-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1423 Å)
主引用文献Identification of the allosteric regulatory site of insulysin.
Plos One, 6, 2011
5J8D
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BU of 5j8d by Molmil
Structure of nitroreductase from E. cloacae complexed with nicotinic acid adenine dinucleotide
分子名称: FLAVIN MONONUCLEOTIDE, NICOTINIC ACID ADENINE DINUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
著者Haynes, C.A, Koder, R.L, Miller, A.F, Rodgers, D.W.
登録日2016-04-07
公開日2017-05-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism-Informed Refinement Reveals Altered Substrate-Binding Mode for Catalytically Competent Nitroreductase.
Structure, 25, 2017
5J8G
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BU of 5j8g by Molmil
Structure of nitroreductase from E. cloacae complexed with para-nitrobenzoic acid
分子名称: 4-NITROBENZOIC ACID, FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
著者Haynes, C.A, Koder, R.L, Miller, A.-F, Rodgers, D.W.
登録日2016-04-07
公開日2017-05-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism-Informed Refinement Reveals Altered Substrate-Binding Mode for Catalytically Competent Nitroreductase.
Structure, 25, 2017
1S4B
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BU of 1s4b by Molmil
Crystal structure of human thimet oligopeptidase.
分子名称: Thimet oligopeptidase, ZINC ION
著者Ray, K, Hines, C.S, Coll-Rodriguez, J, Rodgers, D.W.
登録日2004-01-15
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human thimet oligopeptidase provides insight into substrate recognition, regulation, and localization
J.Biol.Chem., 279, 2004
1ZA5
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BU of 1za5 by Molmil
Q69H-FeSOD
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, Superoxide dismutase [Fe]
著者Yikilmaz, E, Rodgers, D.W, Miller, A.F.
登録日2005-04-05
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crucial Importance of Chemistry in the Structure-Function Link: Manipulating Hydrogen Bonding in Iron-Containing Superoxide Dismutase.
Biochemistry, 45, 2006
2BKB
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BU of 2bkb by Molmil
q69e-FeSOD
分子名称: FE (II) ION, SUPEROXIDE DISMUTASE [FE]
著者Yikilmaz, E, Rodgers, D.W, Miller, A.-F.
登録日2005-02-14
公開日2007-01-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crucial Importance of Chemistry in the Structure-Function Link: Manipulating Hydrogen Bonding in Iron-Containing Superoxide Dismutase.
Biochemistry, 45, 2006
1Q6X
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BU of 1q6x by Molmil
Crystal structure of rat choline acetyltransferase
分子名称: SODIUM ION, choline O-acetyltransferase
著者Cai, Y, Rodgers, D.W.
登録日2003-08-14
公開日2004-06-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Choline acetyltransferase structure reveals distribution of mutations that cause motor disorders.
Embo J., 23, 2004
1I1I
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BU of 1i1i by Molmil
NEUROLYSIN (ENDOPEPTIDASE 24.16) CRYSTAL STRUCTURE
分子名称: NEUROLYSIN, ZINC ION
著者Brown, C.K, Madauss, K, Lian, W, Tolbert, W.D, Beck, M.R, Rodgers, D.W.
登録日2001-02-01
公開日2001-02-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of neurolysin reveals a deep channel that limits substrate access.
Proc.Natl.Acad.Sci.USA, 98, 2001
2OR1
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BU of 2or1 by Molmil
RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
分子名称: 434 REPRESSOR, DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3')
著者Aggarwal, A.K, Rodgers, D.W, Drottar, M, Ptashne, M, Harrison, S.C.
登録日1989-09-05
公開日1989-09-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Recognition of a DNA operator by the repressor of phage 434: a view at high resolution.
Science, 242, 1988
1KQC
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BU of 1kqc by Molmil
Structure of Nitroreductase from E. cloacae Complex with Inhibitor Acetate
分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE
著者Haynes, C.A, Koder, R.L, Miller, A.F, Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
1KQB
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BU of 1kqb by Molmil
Structure of Nitroreductase from E. cloacae complex with inhibitor benzoate
分子名称: BENZOIC ACID, FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE
著者Haynes, C.A, Koder, R.L, Miller, A.F, Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
1KQD
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Structure of Nitroreductase from E. cloacae Bound with 2e-Reduced Flavin Mononucleotide (FMN)
分子名称: FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE
著者Haynes, C.A, Koder, R.L, Miller, A.F, Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
3CUE
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BU of 3cue by Molmil
Crystal structure of a TRAPP subassembly activating the Rab Ypt1p
分子名称: GTP-binding protein YPT1, PALMITIC ACID, Transport protein particle 18 kDa subunit, ...
著者Cai, Y, Reinisch, K.M.
登録日2008-04-16
公開日2008-07-08
最終更新日2012-03-21
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.
Cell(Cambridge,Mass.), 133, 2008
3CRO
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THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 CRO)
著者Mondragon, A, Harrison, S.C.
登録日1990-07-06
公開日1991-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The phage 434 Cro/OR1 complex at 2.5 A resolution.
J.Mol.Biol., 219, 1991

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