3V9A
 
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6K1G
 | | Crystal structure of the L-fucose isomerase soaked with Mn2+ from Raoultella sp. | | Descriptor: | L-fucose isomerase, MANGANESE (II) ION | | Authors: | Kim, I.J, Kim, D.H, Nam, K.H, Kim, K.H. | | Deposit date: | 2019-05-10 | | Release date: | 2020-05-13 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.96 Å) | | Cite: | Enzymatic synthesis of l-fucose from l-fuculose using a fucose isomerase fromRaoultellasp. and the biochemical and structural analyses of the enzyme.
Biotechnol Biofuels, 12, 2019
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6K1F
 | | Crystal structure of the L-fucose isomerase from Raoultella sp. | | Descriptor: | L-fucose isomerase, MANGANESE (II) ION | | Authors: | Kim, I.J, Kim, D.H, Nam, K.H, Kim, K.H. | | Deposit date: | 2019-05-10 | | Release date: | 2020-05-13 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Enzymatic synthesis of l-fucose from l-fuculose using a fucose isomerase fromRaoultellasp. and the biochemical and structural analyses of the enzyme.
Biotechnol Biofuels, 12, 2019
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3G9U
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3G9Z
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3G9T
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3H19
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3H1A
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3H1B
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5Y8R
 | | ZsYellow at pH 3.5 | | Descriptor: | GFP-like fluorescent chromoprotein FP538 | | Authors: | Bae, J.E, Kim, I.J, Nam, K.H. | | Deposit date: | 2017-08-21 | | Release date: | 2017-09-13 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Disruption of the hydrogen bonding network determines the pH-induced non-fluorescent state of the fluorescent protein ZsYellow by protonation of Glu221.
Biochem. Biophys. Res. Commun., 493, 2017
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5Y8Q
 | | ZsYellow at pH 8.0 | | Descriptor: | GFP-like fluorescent chromoprotein FP538 | | Authors: | Bae, J.E, Kim, I.J, Nam, K.H. | | Deposit date: | 2017-08-21 | | Release date: | 2017-09-13 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Disruption of the hydrogen bonding network determines the pH-induced non-fluorescent state of the fluorescent protein ZsYellow by protonation of Glu221.
Biochem. Biophys. Res. Commun., 493, 2017
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5Y4J
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5Y4I
 | | Crystal structure of glucose isomerase in complex with glycerol in one metal binding mode | | Descriptor: | ACETATE ION, GLYCEROL, MAGNESIUM ION, ... | | Authors: | Bae, J.E, Kim, I.J, Nam, K.H. | | Deposit date: | 2017-08-03 | | Release date: | 2017-09-20 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.91 Å) | | Cite: | Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode
Biochem. Biophys. Res. Commun., 493, 2017
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5Z6V
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6AA7
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2OHC
 | | structural and mutational analysis of tRNA-intron splicing endonuclease from Thermoplasma acidophilum DSM1728 | | Descriptor: | tRNA-splicing endonuclease | | Authors: | Kim, Y.K, Mizutani, K, Rhee, K.H, Lee, W.H, Park, S.Y, Hwang, K.Y. | | Deposit date: | 2007-01-10 | | Release date: | 2007-11-27 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structural and Mutational Analysis of tRNA Intron-Splicing Endonuclease from Thermoplasma acidophilum DSM 1728: Catalytic Mechanism of tRNA Intron-Splicing Endonucleases
J.Bacteriol., 189, 2007
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2OHE
 | | Structural and mutational analysis of tRNA-Intron splicing endonuclease from Thermoplasma acidophilum DSM 1728 | | Descriptor: | tRNA-splicing endonuclease | | Authors: | Kim, Y.K, Mizutani, K, Rhee, K.H, Lee, W.H, Park, S.Y, Hwang, K.Y. | | Deposit date: | 2007-01-10 | | Release date: | 2007-11-27 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Structural and Mutational Analysis of tRNA Intron-Splicing Endonuclease from Thermoplasma acidophilum DSM 1728: Catalytic Mechanism of tRNA Intron-Splicing Endonucleases
J.Bacteriol., 189, 2007
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7MI4
 | | Symmetrical PAM-PAM prespacer bound Cas4/Cas1/Cas2 complex | | Descriptor: | CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (35-MER), ... | | Authors: | Hu, C.Y, Ke, A.K. | | Deposit date: | 2021-04-16 | | Release date: | 2021-11-17 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021
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7MIB
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7MI9
 | | Full integration complex of Cas1/Cas2 from Cas4-containing system | | Descriptor: | CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (5'-D(P*CP*GP*GP*AP*AP*AP*AP*GP*AP*GP*CP*C)-3'), ... | | Authors: | Hu, C.Y, Ke, A.K. | | Deposit date: | 2021-04-16 | | Release date: | 2021-11-17 | | Method: | ELECTRON MICROSCOPY (3.89 Å) | | Cite: | Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021
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7MID
 | | Sub-complex of Cas4-Cas1-Cas2 bound PAM containing DNA | | Descriptor: | CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (33-MER), ... | | Authors: | Hu, C.Y, Ke, A.K. | | Deposit date: | 2021-04-16 | | Release date: | 2021-11-17 | | Method: | ELECTRON MICROSCOPY (3.56 Å) | | Cite: | Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021
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7MI5
 | | Asymmetrical PAM-Non PAM prespacer bound Cas4/Cas1/Cas2 complex | | Descriptor: | CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (26-MER), ... | | Authors: | Hu, C.Y, Ke, A.K. | | Deposit date: | 2021-04-16 | | Release date: | 2021-11-17 | | Method: | ELECTRON MICROSCOPY (3.57 Å) | | Cite: | Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021
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2NX8
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7FFT
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7FFW
 | | The crystal structure of a domain-swapped dimeric maltodextrin-binding protein MalE from Salmonella enterica | | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, METHOXYETHANE, ... | | Authors: | Wang, L, Bu, T, Bai, X. | | Deposit date: | 2021-07-23 | | Release date: | 2021-09-15 | | Last modified: | 2022-05-18 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Crystal structure of the domain-swapped dimeric maltodextrin-binding protein MalE from Salmonella enterica.
Acta Crystallogr D Struct Biol, 78, 2022
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