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5Y6R
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BU of 5y6r by Molmil
Crystal structure of CSFV NS5B
分子名称: GLYCEROL, Genome polyprotein, SULFATE ION
著者Li, W, Wu, B.
登録日2017-08-13
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal Structure of Classical Swine Fever Virus NS5B Reveals a Novel N-Terminal Domain
J. Virol., 92, 2018
7CY6
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BU of 7cy6 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY7
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BU of 7cy7 by Molmil
Crystal Structure of CMD1 in complex with DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY5
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BU of 7cy5 by Molmil
Crystal Structure of CMD1 in complex with vitamin C
分子名称: ASCORBIC ACID, CITRIC ACID, FE (III) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY8
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BU of 7cy8 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C
分子名称: 1,2-ETHANEDIOL, ASCORBIC ACID, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY4
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BU of 7cy4 by Molmil
Crystal Structure of CMD1 in apo form
分子名称: CITRIC ACID, FE (III) ION, Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
4U85
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BU of 4u85 by Molmil
Human Pin1 with cysteine sulfinic acid 113
分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Li, W, Zhang, Y.
登録日2014-08-01
公開日2015-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015
4U86
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BU of 4u86 by Molmil
Human Pin1 with cysteine sulfonic acid 113
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Li, W, Zhang, Y.
登録日2014-08-01
公開日2015-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015
4U84
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BU of 4u84 by Molmil
Human Pin1 with S-hydroxyl-cysteine 113
分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Li, W, Zhang, Y.
登録日2014-08-01
公開日2015-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015
3UDC
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BU of 3udc by Molmil
Crystal structure of a membrane protein
分子名称: Small-conductance mechanosensitive channel, C-terminal peptide from Small-conductance mechanosensitive channel
著者Li, W, Ge, J, Yang, M.
登録日2011-10-28
公開日2012-10-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.355 Å)
主引用文献Structure and molecular mechanism of an anion-selective mechanosensitive channel of small conductance
Proc.Natl.Acad.Sci.USA, 109, 2012
6V9T
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BU of 6v9t by Molmil
Tudor domain of TDRD3 in complex with a small molecule
分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Tudor domain-containing protein 3, UNKNOWN ATOM OR ION
著者Li, W, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-12-16
公開日2019-12-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
2Z9Q
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BU of 2z9q by Molmil
Transfer RNA in the hybrid P/E state
分子名称: tRNA
著者Frank, J, Li, W.
登録日2007-09-25
公開日2007-10-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献Transfer RNA in the hybrid P/E state
To be Published
3EP2
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BU of 3ep2 by Molmil
Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-29
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
1JT8
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BU of 1jt8 by Molmil
ARCHAEAL INITIATION FACTOR-1A, AIF-1A
分子名称: PROBABLE TRANSLATION INITIATION FACTOR 1A
著者Hoffman, D.W, Li, W.
登録日2001-08-20
公開日2001-09-05
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure and dynamics of translation initiation factor aIF-1A from the archaeon Methanococcus jannaschii determined by NMR spectroscopy
Protein Sci., 10, 2001
3SWH
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BU of 3swh by Molmil
Munc13-1, MUN domain, C-terminal module
分子名称: Protein unc-13 homolog A
著者Tomchick, D.R, Rizo, J, Li, W.
登録日2011-07-13
公開日2011-11-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Crystal Structure of a Munc13 C-terminal Module Exhibits a Remarkable Similarity to Vesicle Tethering Factors.
Structure, 19, 2011
4G6H
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BU of 4g6h by Molmil
Crystal structure of NDH with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
著者Li, W, Feng, Y, Ge, J, Yang, M.
登録日2012-07-19
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.262 Å)
主引用文献Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G6G
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BU of 4g6g by Molmil
Crystal structure of NDH with TRT
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, MAGNESIUM ION, ...
著者Li, W, Feng, Y, Ge, J, Yang, M.
登録日2012-07-19
公開日2012-10-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G74
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BU of 4g74 by Molmil
Crystal structure of NDH with Quinone
分子名称: 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, ...
著者Li, W, Feng, Y, Ge, J, Yang, M.
登録日2012-07-19
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G73
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BU of 4g73 by Molmil
Crystal structure of NDH with NADH and Quinone
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Li, W, Feng, Y, Ge, J, Yang, M.
登録日2012-07-19
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.522 Å)
主引用文献Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4OD4
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BU of 4od4 by Molmil
Apo structure of a UbiA homolog from Aeropyrum pernix K1
分子名称: 4-hydroxybenzoate octaprenyltransferase
著者Li, W, Cheng, W.
登録日2014-01-09
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Structural insights into ubiquinone biosynthesis in membranes.
Science, 343, 2014
4OD5
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BU of 4od5 by Molmil
Substrate-bound structure of a UbiA homolog from Aeropyrum pernix K1
分子名称: 4-hydroxybenzoate octaprenyltransferase, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ...
著者Li, W, Cheng, W.
登録日2014-01-10
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.557 Å)
主引用文献Structural insights into ubiquinone biosynthesis in membranes.
Science, 343, 2014
3EQ4
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BU of 3eq4 by Molmil
Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-30
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3EQ3
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BU of 3eq3 by Molmil
Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-30
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
6KMH
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BU of 6kmh by Molmil
The crystal structure of CASK/Mint1 complex
分子名称: Amyloid-beta A4 precursor protein-binding family A member 1, CHLORIDE ION, IODIDE ION, ...
著者Li, W, Feng, W.
登録日2019-07-31
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献CASK modulates the assembly and function of the Mint1/Munc18-1 complex to regulate insulin secretion.
Cell Discov, 6, 2020
4DY0
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BU of 4dy0 by Molmil
Crystal structure of native protease nexin-1 with heparin
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, GLYCEROL, Glia-derived nexin, ...
著者Huntington, J.A, Li, W.
登録日2012-02-28
公開日2012-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of protease nexin-1 in complex with heparin and thrombin suggest a 2-step recognition mechanism.
Blood, 120, 2012

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