Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8BJY
DownloadVisualize
BU of 8bjy by Molmil
Engineered Fructosyl Peptide Oxidase - X02B mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl Peptide Oxidase mutant (X02B), GLYCEROL
Authors:Estiri, H, Bhattacharya, S, Rodriguez-Buitrago, J.A, Parisini, E.
Deposit date:2022-11-08
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.475 Å)
Cite:Engineered Fructosyl Peptide Oxidase - X02B mutant
To Be Published
8BMU
DownloadVisualize
BU of 8bmu by Molmil
Engineered Fructosyl Peptide Oxidase - X04 mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl Peptide Oxidase mutant (X04), ...
Authors:Estiri, H, Bhattacharya, S, Rodriguez-Buitrago, J.A, Parisini, E.
Deposit date:2022-11-11
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineered Fructosyl Peptide Oxidase - X04 mutant
To Be Published
6HWK
DownloadVisualize
BU of 6hwk by Molmil
Glucosamine kinase (crystal form B)
Descriptor: CHLORIDE ION, Glucosamine kinase, MAGNESIUM ION
Authors:Manso, J.A, Pereira, P.J.B.
Deposit date:2018-10-12
Release date:2019-05-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.688 Å)
Cite:Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity.
Mbio, 10, 2019
6HWJ
DownloadVisualize
BU of 6hwj by Molmil
Glucosamine kinase (crystal form A)
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Manso, J.A, Pereira, P.J.B.
Deposit date:2018-10-12
Release date:2019-05-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity.
Mbio, 10, 2019
6I0A
DownloadVisualize
BU of 6i0a by Molmil
Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with nuded glycan obtained by co-crystallization
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, Endolytic peptidoglycan transglycosylase RlpA
Authors:Alcorlo, M, Hermoso, J.A.
Deposit date:2018-10-25
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis of denuded glycan recognition by SPOR domains in bacterial cell division.
Nat Commun, 10, 2019
6HMN
DownloadVisualize
BU of 6hmn by Molmil
POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00014909
Descriptor: 3-methyl-6-[[(1-methylcyclopropyl)amino]-bis(oxidanyl)-$l^{4}-sulfanyl]-1-(phenylmethyl)quinazoline-2,4-dione, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Tucker, J.A, Brassington, C, Hassall, G.
Deposit date:2018-09-12
Release date:2018-11-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Cell-Active Small Molecule Inhibitors of the DNA-Damage Repair Enzyme Poly(ADP-ribose) Glycohydrolase (PARG): Discovery and Optimization of Orally Bioavailable Quinazolinedione Sulfonamides.
J.Med.Chem., 61, 2018
6HQ9
DownloadVisualize
BU of 6hq9 by Molmil
Crystal structure of the Tudor domain of human ERCC6-L2
Descriptor: DNA excision repair protein ERCC-6-like 2
Authors:Newman, J.A, Gavard, A.E, Nathan, W.J, Pinkas, D.M, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2018-09-24
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Crystal structure of the Tudor domain of human ERCC6-L2
To Be Published
6HWL
DownloadVisualize
BU of 6hwl by Molmil
Glucosamine kinase in complex with glucosamine, ADP and inorganic phosphate
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Manso, J.A, Pereira, P.J.B.
Deposit date:2018-10-12
Release date:2019-05-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity.
Mbio, 10, 2019
6I05
DownloadVisualize
BU of 6i05 by Molmil
Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa
Descriptor: Endolytic peptidoglycan transglycosylase RlpA
Authors:Alcorlo, M, Hermoso, J.A.
Deposit date:2018-10-25
Release date:2019-11-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.213 Å)
Cite:Structural basis of denuded glycan recognition by SPOR domains in bacterial cell division.
Nat Commun, 10, 2019
6I7U
DownloadVisualize
BU of 6i7u by Molmil
Alpha-1-antitrypsin (Ala250Met) in the native conformation
Descriptor: Alpha-1-antitrypsin
Authors:Aldobiyan, I, Lomas, D.A, Irving, J.A.
Deposit date:2018-11-19
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural determinants of instability in alpha-1-antitrypsin
To Be Published
6IBE
DownloadVisualize
BU of 6ibe by Molmil
The FERM domain of Human EPB41L3
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Band 4.1-like protein 3
Authors:Bradshaw, W.J, Katis, V.L, Newman, J.A, Fernandez-Cid, A, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2018-11-29
Release date:2018-12-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The FERM domain of Human EPB41L3
To Be Published
6I7N
DownloadVisualize
BU of 6i7n by Molmil
Trypanothione Reductase from Leismania infantum in complex with TRL156
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Carriles, A.A, Hermoso, J.A.
Deposit date:2018-11-16
Release date:2019-05-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Pyrrolopyrimidine vs Imidazole-Phenyl-Thiazole Scaffolds in Nonpeptidic Dimerization Inhibitors of Leishmania infantum Trypanothione Reductase.
Acs Infect Dis., 5, 2019
6I4V
DownloadVisualize
BU of 6i4v by Molmil
Alpha-1-antitrypsin Queen's (K154N) variant
Descriptor: 3-trimethylsilylpropane-1-sulfonic acid, Alpha-1-antitrypsin, GLYCINE
Authors:Aldobiyan, I, Lomas, D.A, Irving, J.A.
Deposit date:2018-11-12
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural determinants of instability in alpha-1-antitrypsin
To Be Published
6I1O
DownloadVisualize
BU of 6i1o by Molmil
Fab fragment of an antibody selective for wild-type alpha-1-antitrypsin
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FAB 2H2 heavy chain, FAB 2H2 light chain, ...
Authors:Laffranchi, M, Elliston, E.L.K, Miranda, E, Perez, J, Fra, A, Lomas, D.A, Irving, J.A.
Deposit date:2018-10-29
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Intrahepatic heteropolymerization of M and Z alpha-1-antitrypsin.
JCI Insight, 5, 2020
8C0U
DownloadVisualize
BU of 8c0u by Molmil
1,6-anhydro-n-actetylmuramic acid kinase (AnmK) in complex with their natural substrates and products
Descriptor: (2~{R})-2-[(2~{S},3~{R},4~{R},5~{S},6~{R})-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid, 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Jimenez-Faraco, E, Hermoso, J.A.
Deposit date:2022-12-19
Release date:2023-09-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
8BRE
DownloadVisualize
BU of 8bre by Molmil
1,6-anhydro-n-actetylmuramic acid kinase (AnmK)
Descriptor: Anhydro-N-acetylmuramic acid kinase, CHLORIDE ION
Authors:Jimenez-Faraco, E, Hermoso, J.A.
Deposit date:2022-11-23
Release date:2023-09-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
8BV9
DownloadVisualize
BU of 8bv9 by Molmil
Acylphosphatase from E. coli
Descriptor: 1,2-ETHANEDIOL, Acylphosphatase, GLYCEROL, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2023-01-18
Release date:2023-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:First 3-D structural evidence of a native-like intertwined dimer in the acylphosphatase family.
Biochem.Biophys.Res.Commun., 682, 2023
8BD0
DownloadVisualize
BU of 8bd0 by Molmil
Human Gamma-D crystallin R36S mutant with DTT-Cystein Protein modification
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Human Gamma-D Crystallin R36S
Authors:Yorke, B.A, Hill, J.A.
Deposit date:2022-10-17
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:An ultraviolet-driven rescue pathway for oxidative stress to eye lens protein human gamma-D crystallin.
Commun Chem, 7, 2024
8C1U
DownloadVisualize
BU of 8c1u by Molmil
SFX structure of D.m(6-4)photolyase
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
Authors:Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
Deposit date:2022-12-21
Release date:2023-11-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8BLZ
DownloadVisualize
BU of 8blz by Molmil
Engineered Fructosyl Peptide Oxidase - D02 mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl Peptide Oxidase mutant (D02), GLYCEROL, ...
Authors:Estiri, H, Bhattacharya, S, Rodriguez-Buitrago, J.A, Parisini, E.
Deposit date:2022-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fructosyl Peptide Oxidase mutant (D02)
To Be Published
6IAY
DownloadVisualize
BU of 6iay by Molmil
Alpha-1-antitrypsin Queen's (Lys154Asn) variant
Descriptor: Alpha-1-antitrypsin, GLYCINE
Authors:Aldobiyan, I, Lomas, D.A, Irving, J.A.
Deposit date:2018-11-28
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determinants of instability in alpha-1-antitrypsin
To Be Published
8BLX
DownloadVisualize
BU of 8blx by Molmil
Engineered Fructosyl Peptide Oxidase - X02A mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl Peptide Oxidase mutant (X02A), ...
Authors:Estiri, H, Bhattacharya, S, Rodriguez-Buitrago, J.A, Parisini, E.
Deposit date:2022-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Engineered Fructosyl Peptide Oxidase - X02A mutant
To Be Published
8BPI
DownloadVisualize
BU of 8bpi by Molmil
Human Gamma-D crystallin R36S mutant after UV illumination
Descriptor: Gamma-crystallin D
Authors:Yorke, B.A, Hill, J.A.
Deposit date:2022-11-16
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human Gamma-D crystallin R36S mutant with DTT-Protein modification
To Be Published
6I3Z
DownloadVisualize
BU of 6i3z by Molmil
Fab fragment of an antibody selective for wild-type alpha-1-antitrypsin in complex with its antigen
Descriptor: Alpha-1-antitrypsin, Fab 2H2 heavy chain, Fab 2H2 light chain, ...
Authors:Laffranchi, M, Elliston, E.L.K, Miranda, E, Perez, J, Jagger, A.M, Fra, A, Lomas, D.A, Irving, J.A.
Deposit date:2018-11-08
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Intrahepatic heteropolymerization of M and Z alpha-1-antitrypsin.
JCI Insight, 5, 2020
8CDN
DownloadVisualize
BU of 8cdn by Molmil
Crystal structure of human Brachyury in complex with a single T box binding element DNA
Descriptor: DNA (5'-D(*AP*GP*GP*CP*TP*CP*AP*CP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*GP*TP*GP*AP*GP*CP*CP*T)-3'), T-box transcription factor T
Authors:Newman, J.A, Gavard, A.E, von Delft, F, Gileadi, O, Bountra, C.
Deposit date:2023-01-31
Release date:2023-03-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of human Brachyury in complex with a single T box binding element DNA
To Be Published

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon